Coupling estimated effects of QTLs for physiological traits to a crop growth model: predicting yield variation among recombinant inbred lines in barley
Tóm tắt
Từ khóa
Tài liệu tham khảo
Aggarwal, P. K., Kropff, M. J., Teng, P. S. and Khush, G. S. (1997). The challenge of integrating systems approaches in plant breeding: opportunities, accomplishments and limitations. In: Kropff, M. J., Teng, P. S., Aggarwal, P. K., Bouma, J., Bouman, B. A. M., Jones, J. W. and van Laar, H. H. (eds) Applications of Systems Approaches at the Field Level. pp. 1–23. Kluwer Academic Publishers, Dordrecht, The Netherlands.
Bachmann, K. and Hombergen, E. J. (1997). From phenotype via QTL to virtual phenotype in Microseris (Asteraceae): predictions from multilocus marker genotypes. New Phytol, 137: 9–18.
Bindraban, P. S. (1997). Bridging the Gap Between Plant Physiology and Breeding. Identifying Traits to Increase Wheat Yield Potential Using Systems Approaches. PhD Thesis, Wageningen Agricultural University, The Netherlands.
Chasalow, S. D. and Dourleijn, C. J. (1997). Something old, something new: recombining statistical methods for QTL mapping. In: Krajewski, P. and Kaczmarek, Z. (eds) Advances in Biometrical Genetics Proceedings of the Tenth Meeting of the Eucarpia Section Biometrics in Plant Breeding, Poznan, 14–16 May 1997, pp. 87–92. Polish Academy of Sciences, Poznan.
DATA ANALYSIS PRODUCTS DIVISION, MATHSOFT (1997). S-PLUS User’s Guide. Seattle, WA.
Franckowiak, J. D. (1995). Coordinators report: semidwarf genes. Barley Genet Newsl, 25: 112–112.
Haahr, V. and Vonwettstein, D. (1976). Studies of an induced high yielding dwarf-mutant of spring barley. In: Proc 3rd Int Barley Genet Symposium, Garching, 1975 pp. 215–218. Verlag Karl Thiemig, Munich.
Haley, C. S. and Knott, S. A. (1992). A. simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity, 69: 315–324.
Haley, C. S., Knott, S. A. and Elsen, J. (1994). Mapping quantitative trait loci in crosses between outbred lines using least squares. Genetics, 136: 1195–1207.
Haverkort, A. J. and Kooman, P. L. (1997). The use of systems analysis and modelling of growth and development in potato ideotyping under conditions affecting yields. Euphytica, 94: 191–200.
Hoogenboom, G., White, J. W., Acosta-Gallegos, J., Gaudiel, R. G., Myers, J. R. and Silbernagel, M. J. (1997). Evaluation of a crop simulation model that incorporates gene action. Agron J, 89: 613–620.
Hunt, L. A., Pararajasingham, S., Jones, J. W., Hoogenboom, G., Imamura, D. T. and Ogoshi, R. M. (1993). GENCALC Software to facilitate the use of crop models for analyzing field experiments. Agron J, 85: 1090–1094.
Jansen, R. C. and Stam, P. (1994). High resolution of quantitative traits into multiple loci via interval mapping. Genetics, 136: 1447–1455.
Loomis, R. S., Rabbinge, R. and Ng, E. (1979). Explanatory models in crop physiology. Ann Rev Plant Physiol, 30: 339–367.
Martinez, O. and Curnow, R. N. (1992). Estimating the locations and the sizes of the effects of quantitative trait loci using flanking markers. Theor Appl Genet, 85: 480–488.
Paterson, A. H., Lander, E. S., Hewitt, J. D., Peterson, S., Lincoln, S. E. and Tanksley, S. D. (1988). Resolution of quantitative factors by using a complete linkage map of restriction fragment length polymorphisms. Nature, 335: 721–726.
Sinclair, T. R. and Dewit, C. T. (1975). Photosynthate and nitrogen requirements for seed production by various crops. Science, 189: 565–567.
Stam, P. (1998). Crop physiology, QTL analysis and plant breeding. In: Lambers, H., Poorter, H. and van Vuuren, M. M. I. (eds) Inherent Variation in Plant Growth Physiological Mechanisms and Ecological Consequences. Backhuys Publishers, Leiden, The Netherlands.
Vanberloo, R. and Stam, P. (1998). Marker-assisted selection in autogamous RIL population: a simulation study. Theor Appl Genet, 96: 147–154, 10.1007/s001220050721.
Vanooijen, J. W. and Maliepaard, C. (1996). MapQTL. (tm), version 3.0: Software for the calculation of QTL position on genetic maps. CPRO-DLO, Wageningen, The Netherlands.
Virk, P. S., Ford-Lloyd, B. V., Jackson, M. T., Pooni, H. S., Clemeno, T. P. and Newbury, H. J. (1996). Predicting quantitative variation within rice germplasm using molecular markers. Heredity, 76: 296–304.
White, J. W. and Hoogenboom, G. (1996). Simulating effects of genes for physiological traits in a process-oriented crop model. Agron J, 88: 416–422.
Xu, S. (1995). A. comment on the simple regression method for interval mapping. Genetics, 141: 1657–1659.
Xu, S. (1998). Further investigation on the regression method of mapping quantitative trait loci. Heredity, 80: 364–373.
Yin, X., Kropff, M. J. and Stam, P. (1999a). The role of ecophysiological models in QTL analysis: the example of specific leaf area in barley. Heredity, 82: 415–421, 10.1046/j.1365-2540.1999.00503.x.
Yin, X., Stam, P., Dourleijn, C. J. and Kropff, M. J. (1999b). AFLP mapping of quantitative trait loci for yield-determining physiological characters in spring barley. Theor Appl Genet, 99: 244–253, 10.1007/s001220051230.