Copper detoxification machinery of the brain-eating amoeba Naegleria fowleri involves copper-translocating ATPase and the antioxidant system
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Adlard, 2008, Rapid restoration of cognition in Alzheimer's transgenic mice with 8-hydroxy quinoline analogs is associated with decreased interstitial Aß, Neuron, 59, 43, 10.1016/j.neuron.2008.06.018
Ahmed, 2018, Environmental concentrations of copper, alone or in mixture with arsenic, can impact river sediment microbial community structure and functions, Front. Microbiol., 9, 1
Altschul, 1990, Basic local alignment search tool, J. Mol. Biol., 215, 403, 10.1016/S0022-2836(05)80360-2
Alvarez-Carreño, 2018, Structure, function and evolution of the hemerythrin-like domain superfamily, Protein Sci., 27, 848, 10.1002/pro.3374
Arbon, 2020, Adaptive iron utilization compensates for the lack of an inducible uptake system in Naegleria fowleri and represents a potential target for therapeutic intervention, PLoS Negl. Trop. Dis., 14, 1, 10.1371/journal.pntd.0007759
Arnér, 2000, Physiological functions of thioredoxin and thioredoxin reductase, Eur. J. Biochem., 267, 6102, 10.1046/j.1432-1327.2000.01701.x
Aurrecoechea, 2011, AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and microsporidia species, Nucleic Acids Res., 39, 612, 10.1093/nar/gkq1006
Bailly, 2008, A phylogenomic profile of hemerythrins, the nonheme diiron binding respiratory proteins, BMC Evol. Biol., 8, 1, 10.1186/1471-2148-8-244
Bellini, 2018, The therapeutic strategies against Naegleria fowleri, Exp. Parasitol., 187, 1, 10.1016/j.exppara.2018.02.010
Bernsel, 2008, Prediction of membrane-protein topology from first principles, Proc. Natl. Acad. Sci. U. S. A., 105, 7177, 10.1073/pnas.0711151105
Biteau, 2003, ATP-dependent reduction of cysteine-sulphinic acid by S. cerevisiae sulphiredoxin, Nature, 425, 980, 10.1038/nature02075
Brancaccio, 2017, [4Fe-4S] cluster assembly in mitochondria and its impairment by copper, J. Am. Chem. Soc., 139, 719, 10.1021/jacs.6b09567
Capdevila, 2011, Metallothionein protein evolution: a miniassay, J. Biol. Inorg. Chem., 16, 977, 10.1007/s00775-011-0798-3
Cox, 2014, Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ, Mol. Cell. Proteomics, 13, 2513, 10.1074/mcp.M113.031591
Cunha, 2007, Effects of copper and cadmium on cholinesterase and glutathione S-transferase activities of two marine gastropods (Monodonta lineata and Nucella lapillus), Comp. Biochem. Physiol. C Toxicol. Pharmacol., 145, 648, 10.1016/j.cbpc.2007.02.014
Ding, 2013, Cryptococcus neoformans copper detoxification machinery is critical for fungal virulence, Cell Host Microbe, 13, 265, 10.1016/j.chom.2013.02.002
Ding, 2011, The copper regulon of the human fungal pathogen Cryptococcus neoformans H99, Mol. Microbiol., 81, 1560, 10.1111/j.1365-2958.2011.07794.x
Ding, 2009, Metal ionophores - an emerging class of anticancer drugs, IUBMB Life, 61, 1013, 10.1002/iub.253
Dobson, 2015, CCTOP: a Consensus Constrained TOPology prediction web server, Nucleic Acids Res., 43, W408, 10.1093/nar/gkv451
Eyice, 2018, Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere, ISME J., 12, 145, 10.1038/ismej.2017.148
Fernando, 1992, Thioredoxin regenerates proteins inactivated by oxidative stress in endothelial cells, Eur. J. Biochem., 209, 917, 10.1111/j.1432-1033.1992.tb17363.x
Festa, 2014, Exploiting innate immune cell activation of a copper-dependent antimicrobial agent during infection, Chem. Biol., 21, 977, 10.1016/j.chembiol.2014.06.009
Findlay, 2006, A novel role for human sulfiredoxin in the reversal of glutathionylation, Canc. Res., 66, 6800, 10.1158/0008-5472.CAN-06-0484
Flemming, 1989, Copper toxicity and chemistry in the environment: a review, Water. Air. Soil Pollut., 44, 143, 10.1007/BF00228784
Fulton, 1974, Axenic cultivation of Naegleria gruberi. Requirement for methionine, Exp. Cell Res., 88, 365, 10.1016/0014-4827(74)90253-5
Fung, 2013, Copper efflux is induced during anaerobic amino acid limitation in escherichia coli to protect iron-sulfur cluster enzymes and biogenesis, J. Bacteriol., 195, 4556, 10.1128/JB.00543-13
Gaetke, 2003, Copper toxicity, oxidative stress, and antioxidant nutrients, Toxicology, 189, 147, 10.1016/S0300-483X(03)00159-8
Garcia-Santamarina, 2017, Cryptococcus neoformans iron-sulfur protein biogenesis machinery is a novel layer of protection against Cu stress, mBio, 8, 1, 10.1128/mBio.01742-17
Gietz, 2007, High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method, Nat. Protoc., 2, 38, 10.1038/nprot.2007.15
Harwood, 2014, Lost in centrifugation: accounting for transporter protein losses in quantitative targeted absolute proteomics, Drug Metab. Dispos., 42, 1766, 10.1124/dmd.114.058446
Helsel, 2017, Chemical and functional properties of metal chelators that mobilize copper to elicit fungal killing of Cryptococcus neoformans, Metallomics, 9, 69, 10.1039/C6MT00172F
Herman, 2020
Hodgkinson, 2012, Copper homeostasis at the host-pathogen interface, J. Biol. Chem., 287, 13549, 10.1074/jbc.R111.316406
Holmgren, 1985, Thioredoxin, Annu. Rev. Biochem., 54, 237, 10.1146/annurev.bi.54.070185.001321
Holmgren, 2010, Thioredoxin and thioredoxin reductase: current research with special reference to human disease, Biochem. Biophys. Res. Commun., 396, 120, 10.1016/j.bbrc.2010.03.083
Isah, 2020, Expression and copper binding properties of the N-terminal domain of copper P-type ATPases of African trypanosomes, Mol. Biochem. Parasitol., 235, 111245, 10.1016/j.molbiopara.2019.111245
Käll, 2004, A combined transmembrane topology and signal peptide prediction method, J. Mol. Biol., 338, 1027, 10.1016/j.jmb.2004.03.016
Kühlbrandt, 2004, Biology, structure and mechanism of P-type ATPases, Nat. Rev. Mol. Cell Biol., 5, 282, 10.1038/nrm1354
Kung, 2006, Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry, Proteomics, 6, 2746, 10.1002/pmic.200500108
Letelier, 2006, Inhibition of cytosolic glutathione S-transferase activity from rat liver by copper, Chem. Biol. Interact., 164, 39, 10.1016/j.cbi.2006.08.013
Lutsenko, 2007, Biochemical basis of regulation of human copper-transporting ATPases, Arch. Biochem. Biophys., 463, 134, 10.1016/j.abb.2007.04.013
Mach, 2018, Iron economy in Naegleria gruberi reflects its metabolic flexibility, Int. J. Parasitol., 48, 719, 10.1016/j.ijpara.2018.03.005
Maciver, 2020, Is Naegleria fowleri an emerging parasite?, Trends Parasitol., 36, 19, 10.1016/j.pt.2019.10.008
Mackie, 2016, Host-imposed copper poisoning impacts fungal micronutrient acquisition during systemic Candida albicans infections, PLoS One, 11, 1, 10.1371/journal.pone.0158683
Macomber, 2009, The iron-sulfur clusters of dehydratases are primary intracellular targets of copper toxicity, Proc. Natl. Acad. Sci. U. S. A., 106, 8344, 10.1073/pnas.0812808106
Meade, 2019, P-type transport ATPases in Leishmania and Trypanosoma, Parasite, 26, 69, 10.1051/parasite/2019069
Moller, 1996, Structural organization, ion transport, and energy transduction of P-type ATPases, Biochim. Biophys. Acta, 1286, 1, 10.1016/0304-4157(95)00017-8
Mull, 2013, Improved method for the detection and quantification of Naegleria fowleri in water and sediment using immunomagnetic separation and real-time PCR, J. Parasitol. Res., 2013, 608367, 10.1155/2013/608367
Ogawa, 2001, Heme mediates derepression of Maf recognition element through direct binding to transcription repressor Bach1, EMBO J., 20, 2835, 10.1093/emboj/20.11.2835
Pearce, 1999, Toxicity of copper, cobalt, and nickel salts is dependent on histidine metabolism in the yeast Saccharomyces cerevisiae, J. Bacteriol., 181, 4774, 10.1128/JB.181.16.4774-4779.1999
Perez-Riverol, 2019, The PRIDE database and related tools and resources in 2019: improving support for quantification data, Nucleic Acids Res., 47, D442, 10.1093/nar/gky1106
Pesce, 2013, vol. 63, 79
1998
Rasoloson, 2004, Copper pathways in Plasmodium falciparum infected erythrocytes indicate an efflux role for the copper P-ATPase, Biochem. J., 381, 803, 10.1042/BJ20040335
Reeder, 2011, The antifungal mechanism of action of zinc pyrithione, Br. J. Dermatol., 165, 9, 10.1111/j.1365-2133.2011.10571.x
Rhee, 2007, Molecular cloning and characterization of omega class glutathione S-transferase (GST-O) from the polychaete Neanthes succinea: biochemical comparison with theta class glutathione S-transferase (GST-T), Comp. Biochem. Physiol. C Toxicol. Pharmacol., 146, 471, 10.1016/j.cbpc.2007.05.003
Salazar-Medina, 2010, Inhibition by Cu2+ and Cd2+ of a Mu-class glutathione S-transferase from shrimp Litopenaeus vannamei, J. Biochem. Mol. Toxicol., 24, 218, 10.1002/jbt.20326
Sheldon, 2019, Metals as phagocyte antimicrobial effectors, Curr. Opin. Immunol., 60, 1, 10.1016/j.coi.2019.04.002
Shimizu, 2012, Binding of cysteine thiolate to the Fe(III) heme complex is critical for the function of heme sensor proteins, J. Inorg. Biochem., 108, 171, 10.1016/j.jinorgbio.2011.08.018
Siddiqui, 2016, Biology and pathogenesis of Naegleria fowleri, Acta Trop., 164, 375, 10.1016/j.actatropica.2016.09.009
Smith, 2017, Copper acquisition and utilization in fungi, Annu. Rev. Microbiol., 597, 10.1146/annurev-micro-030117-020444
Söding, 2005, The HHpred interactive server for protein homology detection and structure prediction, Nucleic Acids Res., 33, 244, 10.1093/nar/gki408
Solioz, 1996, CPx-type ATPases: a class of P-type ATPases that pump heavy metals, Trends Biochem. Sci., 21, 237, 10.1016/S0968-0004(96)20016-7
Song, 2015, 8-Hydroxyquinoline: a privileged structure with broad-ranging pharmacological potentials, Med. Chem. Commun., 6, 61, 10.1039/C4MD00284A
Sykora, 1983, Occurrence and pathogenicity of Naegleria fowleri in artificially heated waters, Appl. Environ. Microbiol., 45, 974, 10.1128/aem.45.3.974-979.1983
Szczypka, 1997, Saccharomyces cerevisiae mutants altered in vacuole function are defective in copper detoxification and iron-responsive gene transcription, Yeast, 13, 1423, 10.1002/(SICI)1097-0061(199712)13:15<1423::AID-YEA190>3.0.CO;2-C
Tyanova, 2016, The Perseus computational platform for comprehensive analysis of (prote)omics data, Nat. Methods, 13, 731, 10.1038/nmeth.3901
Vuilleumier, 2002, The elusive roles of bacterial glutathione S-transferases: new lessons from genomes, Appl. Microbiol. Biotechnol., 58, 138, 10.1007/s00253-001-0836-0
Weissman, 2000, The high copper tolerance of Candida albicans is mediated by a P-type ATPase, Proc. Natl. Acad. Sci. U. S. A., 97, 3520, 10.1073/pnas.97.7.3520
White, 2009, A role for the ATP7A copper-transporting ATPase in macrophage bactericidal activity, J. Biol. Chem., 284, 33949, 10.1074/jbc.M109.070201
Wiemann, 2017, Aspergillus fumigatus copper export machinery and reactive oxygen intermediate defense counter host copper-mediated oxidative antimicrobial offense, Cell Rep., 19, 1008, 10.1016/j.celrep.2017.04.019
Wu, 2010, Amino acid influence on copper binding to peptides: cysteine versus arginine, J. Am. Soc. Mass Spectrom., 21, 522, 10.1016/j.jasms.2009.12.020
Yang, 2018, Novel 8-hydroxyquinoline derivatives targeting β-amyloid aggregation, metal chelation and oxidative stress against Alzheimer's disease, Bioorganic Med. Chem., 26, 3191, 10.1016/j.bmc.2018.04.043
Yuan, 1997, Restriction of copper export in Saccharomyces cerevisiae to a late Golgi or post-Golgi compartment in the secretory pathway, J. Biol. Chem., 272, 25787, 10.1074/jbc.272.41.25787
Zhang, 1995, Heme binds to a short sequence that serves a regulatory function in diverse proteins, EMBO J., 14, 313, 10.1002/j.1460-2075.1995.tb07005.x