Complete sequencing and analysis of pEN2701, a novel 13-kb plasmid from an endophytic Streptomyces sp.
Tài liệu tham khảo
Bhattacharjee, 1991, A segment of a plasmid gene required for conjugal transfer encodes a site-specific, single-strand DNA endonuclease and ligase, Nucl. Acids Res., 19, 1129, 10.1093/nar/19.5.1129
Bibb, 1978, Transformation of plasmid DNA into Streptomyces at high frequency, Nature, 274, 398, 10.1038/274398a0
Birnboim, 1979, A rapid alkaline extraction procedure for screening recombinant plasmid DNA, Nucl. Acids Res., 7, 1513, 10.1093/nar/7.6.1513
Brom, 2002, Conservation of plasmid-encoded traits among bean-nodulating Rhizobium species, Appl. Environ. Micro., 68, 2555, 10.1128/AEM.68.5.2555-2561.2002
Browning, 1992, Identification of an isozyme form of protein synthesis initiation factor 4F in plants, J. Biol. Chem., 267, 10096, 10.1016/S0021-9258(19)50204-6
Bukhalid, 1998, nec1, a gene conferring a necrogenic phenotype is conserved in plant-pathogenic Streptomyces spp. and linked to a transposase pseudogene, Mol. Plant Microbe Interact., 11, 960, 10.1094/MPMI.1998.11.10.960
Bukhalid, 1997, Cloning and expression of a gene from Streptomyces scabies encoding a putative pathogenicity factor, J. Bacteriol., 179, 7776, 10.1128/jb.179.24.7776-7783.1997
Chater, 1993, Genetics of differentiation in Streptomyces, Annu. Rev. Microbiol., 47, 685, 10.1146/annurev.mi.47.100193.003345
Coombs, J.T., 2002. Isolation and characterisation of endophytic actinomycetes from wheat (Triticum aestivum). Ph.D. Thesis. Flinders University, Adelaide, Australia
Cornelis, 2001, The plant pathogen Rhodococcus fascians colonizes the exterior and interior of the aerial parts of plants, Mol. Plant Microbe Interact., 14, 599, 10.1094/MPMI.2001.14.5.599
Del Solar, 1998, Replication and control of circular bacterial plasmids, Microbiol. Mol. Biol. Rev., 62, 434, 10.1128/MMBR.62.2.434-464.1998
Ecker, 1995, The ethylene signal transduction pathway in plants, Science, 268, 667, 10.1126/science.7732375
Fujimoto, 2000, Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression, Plant Cell, 12, 393, 10.1105/tpc.12.3.393
Healy, 1999, Characterisation of an insertion sequence element associated with genetically diverse plant pathogenic Streptomyces spp., J. Bacteriol., 181, 1562, 10.1128/JB.181.5.1562-1568.1999
Healy, 2000, The txtAB genes of the plant pathogen Streptomyces acidiscabies encode a peptide synthetase required for phytotoxin thaxtomin A production and pathogenicity, Mol. Microbiol., 38, 1, 10.1046/j.1365-2958.2000.02170.x
Ishikawa, 1999, FramePlot: a new implementation of the Frame analysis for predicting protein-coding regions in bacterial DNA with a high G+C content, FEMS Microbiol. Lett., 174, 251, 10.1111/j.1574-6968.1999.tb13576.x
John, 2001, Analysis of pFQ12, a 22.4-kb Frankia plasmid, Can. J. Microbiol., 47, 608, 10.1139/w01-050
Kieser, 2000
Kieser, 1982, pIJ101, a multi-copy broad host-range Streptomyces plasmid: functional analysis and development of DNA cloning vectors, Mol. Gen. Genet., 185, 223, 10.1007/BF00330791
Lavire, 2001, Analysis of pFQ31, a 8551-bp cryptic plasmid from the symbiotic nitrogen-fixing actinomycete Frankia, FEMS Microbiol. Lett., 197, 111, 10.1111/j.1574-6968.2001.tb10591.x
Maas, 1998, The conjugative plasmid pSG5 from Streptomyces ghanensis DSM 2932 differs in its transfer functions from other Streptomyces rolling-circle-type plasmids, Microbiology, 144, 2809, 10.1099/00221287-144-10-2809
Mayfield, 1972, Studies on the ecology of actinomycetes in soil. IV Observations on the form and growth of streptomycetes in soil, Soil Biol. Biochem., 4, 79, 10.1016/0038-0717(72)90045-4
Nielsen, 1997, Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites, Prot. Eng., 10, 1, 10.1093/protein/10.1.1
Perwez, 1999, Stabilization of the relaxosome and stimulation of conjugal transfer are genetically distinct functions of the R1162 protein MobB, J. Bacteriol., 181, 2124, 10.1128/JB.181.7.2124-2131.1999
Schumperli, 1982, Translational coupling at an intercistronic boundary of the Escherichia coli galactose operon, Cell, 30, 865, 10.1016/0092-8674(82)90291-4
Servin-Gonzalez, 1995, Sequence and functional analysis of the Streptomyces phaeochromogenes plasmid pJV1 reveals a modular organisation of Streptomyces plasmids that replicate by rolling-circle, Microbiology, 141, 2499, 10.1099/13500872-141-10-2499
Sezonov, 2000, KorSA from the Streptomyces integrative element pSAM2 is a central transcriptional repressor: target genes and binding sites, J. Bacteriol., 182, 1243, 10.1128/JB.182.5.1243-1250.2000
Stein, 1989, Identification and analysis of transcriptional regulatory signals for the kil and kor loci of Streptomyces plasmid pIJ101, J. Bacteriol., 171, 5768, 10.1128/jb.171.11.5768-5775.1989
Zhang, 1995, Localized denaturation of oriT DNA within relaxosomes of the broad host-range plasmid R1162, Mol. Microbiol., 17, 727, 10.1111/j.1365-2958.1995.mmi_17040727.x