Complete nucleotide sequence of Dendrocalamus latiflorus and Bambusa oldhamii chloroplast genomes

Arlen, 2007, Field production and functional evaluation of chloroplast-derived interferon-alpha2b, Plant Biotech. J., 5, 511, 10.1111/j.1467-7652.2007.00258.x

Arlen, 2008, Effective plague vaccination via oral delivery of plant cells expressing F1-V antigens in chloroplasts, Infect. Immun., 76, 3640, 10.1128/IAI.00050-08

Bortiri, 2008, The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes, BMC Research Notes, 1, 61, 10.1186/1756-0500-1-61

Daniell, 2007, Transgene containment via maternal inheritance, Proc. Natl. Acad. Sci. USA, 104, 6879, 10.1073/pnas.0702219104

Daniell, 1998, Containment of herbicide resistance through genetic engineering of the chloroplast genome, Nat. Biotechnol., 16, 345, 10.1038/nbt0498-345

Daniell, 2006, Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes, Theor. Appl. Genet., 112, 1503, 10.1007/s00122-006-0254-x

Daniell, 2008, The complete nucleotide sequence of the cassava (Manihot esculenta) chloroplast genome and the evolution of atpF in Malphigiales: RNA editing and multiple losses of a group II intron, Theor. Appl. Genet., 116, 723, 10.1007/s00122-007-0706-y

Day, 1984, Chloroplast DNA deletions associated with wheat plants regenerated from pollen: possible basis for maternal inheritance of chloroplasts, Cell, 39, 359, 10.1016/0092-8674(84)90014-X

DeCosa, 2001, Overexpression of the Bt Cry2Aa2 operon in chloroplasts leads to formation of insecticidal crystals, Nat. Biotechnol., 19, 71, 10.1038/83559

DeGray, 2001, Expression of an antimicrobial peptide via the chloroplast genome to control phytopathogenic bacteria and fungi, Plant Physiol., 127, 852, 10.1104/pp.010233

Demesure, 1995, A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants, Mol. Ecol., 4, 129, 10.1111/j.1365-294X.1995.tb00201.x

Dhingra, 2005, ASAP: amplification, sequencing, and annotation of plastomes, BMC Genomics, 6, 176, 10.1186/1471-2164-6-176

Dumolin-Lapegue, 1997, An enlarged set of consensus primers for the study of organelle DNA in plants, Mol. Ecol., 6, 393, 10.1046/j.1365-294X.1997.00193.x

Felsenstein, 1985, Confidence limits on phylogenies: an approach using the bootstrap, Evolution, 39, 783, 10.2307/2408678

Grass Phylogeny Working Group, 2001, Phylogeny and subfamilial classification of the grasses (Poaceae), Annals Missouri Bot. Gard., 88, 373, 10.2307/3298585

Grevich, 2005, Chloroplast genetic engineering: recent advances and future perspectives, Crit. Rev. Plant Sci., 24, 83, 10.1080/07352680590935387

Grivet, 2001, Genome walking with consensus primers: application to the large single copy region of chloroplast DNA, Mol. Ecol. Notes, 1, 345, 10.1046/j.1471-8278.2001.00107.x

Heinze, 2007, A database of PCR primers for the chloroplast genomes of higher plants, Plant Methods., 3, 4, 10.1186/1746-4811-3-4

Hsu, 2000, A sensitive method for detecting bamboo mosaic virus (BaMV) and establishment of BaMV-free meristem tip cultures, Plant Path., 49, 101, 10.1046/j.1365-3059.2000.00433.x

Jansen, 2005, Methods for obtaining and analyzing whole chloroplast genome sequences, Meth. Enzymol., 395, 348, 10.1016/S0076-6879(05)95020-9

Jansen, 2006, Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids, BMC Evol. Biol., 6, 32, 10.1186/1471-2148-6-32

Kode, 2006, Isolation of precise plastid deletion mutants by homology-based excision: a resource for site-directed mutagenesis, multi-gene changes and high-throughput plastid transformation, Plant J., 46, 901, 10.1111/j.1365-313X.2006.02736.x

Kolaczkowski, 2004, Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous, Nature, 431, 980, 10.1038/nature02917

Koya, 2005, Plant-based vaccine: mice immunized with chloroplast-derived anthrax protective antigen survive anthrax lethal toxin challenge, Infect. Immun., 73, 8266, 10.1128/IAI.73.12.8266-8274.2005

Kumar, 2004, Chloroplast-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots and leaves confers enhanced salt tolerance, Plant Physiol., 136, 2843, 10.1104/pp.104.045187

Lee, 2003, Accumulation of trehalose within transgenic chloroplasts confers drought tolerance, Mol. Breed., 11, 1, 10.1023/A:1022100404542

Lee, 2006, Plastid transformation in the monocotyledonous cereal crop, rice (Oryza sativa) and transmission of transgenes to their progeny, Mol. Cells., 21, 401, 10.1016/S1016-8478(23)12870-6

Lee, 2006, The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms, BMC Genomics, 7, 61, 10.1186/1471-2164-7-61

Leelavathi, 2003, Chloroplast expression of His-tagged GUS-fusions: a general strategy to overproduce and purify foreign proteins using transplastomic plants as bioreactors, Mol. Breed., 11, 49, 10.1023/A:1022114427971

Lin, 1998, Micropropagation of Bambusa edulis through nodal explants of field-grown culms and flowering of regenerated plantlets, Plant Cell Rep., 17, 617, 10.1007/s002990050453

Lin, 2007, Flowering of the green and albino regenerates obtained via somatic embryogenesis in inflorescence segments of Dendrocalamus latiflorus, New Forests, 34, 177, 10.1007/s11056-007-9045-8

Lin, 2008, Differential protein expression of two photosystem II subunits, PsbO and PsbP in an albino mutant of Bambusa edulis Munro with chloroplast DNA aberration, J. Amer. Soc. Hort. Sci., 133, 270, 10.21273/JASHS.133.2.270

Liu, 2007, Chloroplast genome aberration in micropropagation derived albino Bambusa edulis mutants, ab1 and ab2, Plant Cell Tiss. Org. Cult., 88, 147, 10.1007/s11240-006-9182-3

Logacheva, 2008, Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale – a wild ancestor of cultivated buckwheat, BMC Plant Biol., 8, 59, 10.1186/1471-2229-8-59

Martin, 1998, Gene transfer to the nucleus and the evolution of chloroplasts, Nature, 393, 162, 10.1038/30234

McBride, 1995, Amplification of a chimeric Bacillus gene in chloroplasts leads to an extraordinary level of an insecticidal protein in tobacco, BioTechn., 13, 362, 10.1038/nbt0495-362

Ogihara, 2002, Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA, Mol. Genot. Genomics, 266, 740, 10.1007/s00438-001-0606-9

Palmer, 1985, Chloroplast DNA and molecular phylogeny, Bioessays, 2, 263, 10.1002/bies.950020607

Quesada-Vargas, 2005, Characterization of heterologous multigene operons in transgenic chloroplast. Transcription, processing and translation, Plant Physiol., 138, 1746, 10.1104/pp.105.063040

Ruhlman, 2006, Complete plastid genome sequence of Daucus carota: implications for biotechnology and phylogeny of angiosperms, BMC Genomics, 7, 224, 10.1186/1471-2164-7-222

Ruiz, 2003, Phytoremediation of organomercurial compounds via chloroplast genetic engineering, Plant Physiol., 132, 1344, 10.1104/pp.103.020958

Samson, 2007, The complete nucleotide sequence of the coffee (Coffea arabica L.) chloroplast genome: organization and implications for biotechnology and phylogenetic relationships among angiosperms, Plant Biotech. J., 5, 339, 10.1111/j.1467-7652.2007.00245.x

Saski, 2005, Complete chloroplast genome sequence of Glycine max and comparative analyses with other legume genomics, Plant Mol. Biol., 59, 309, 10.1007/s11103-005-8882-0

Saski, 2007, Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes, Theor. Appl. Genet., 115, 571, 10.1007/s00122-007-0567-4

Sheu, 1996, Carbohydrate starvation stimulates differential expression of rice α-amylase genes that is modulated through complicated transcriptional and postranscriptional process, J. Biol. Chem., 27, 26998, 10.1074/jbc.271.43.26998

Stapleton, 1997, Morphology of woody bamboos, The Bamboos, 251

Staub, 2000, High-yield production of a human therapeutic protein in tobacco chloroplasts, Nat. Biotechnol., 18, 333, 10.1038/73796

Tamura, 2007, MEGA4: molecular evolutionary genetics analysis (MEGA) software Version 4.0, Mol. Biol. Evol., 24, 1596, 10.1093/molbev/msm092

Tang, 2004, A comparison of rice chloroplast genome, Plant Physiol., 135, 412, 10.1104/pp.103.031245

Tregoning, 2005, Protection against tetanus toxin using a plant-based vaccine, Eur. J. Immunol., 35, 1320, 10.1002/eji.200425453

Verma, 2007, Chloroplast vector systems for biotechnology applications, Plant Physiol., 145, 1129, 10.1104/pp.107.106690

Verma, 2008, A protocol for expression of foreign genes in chloroplasts, Nat. Protocols, 3, 739, 10.1038/nprot.2007.522

Wyman, 2004, Automatic annotation of organellar genomes with DOGMA, Bioinformatics, 20, 3252, 10.1093/bioinformatics/bth352