Complete genome sequence of a novel fusarivirus from the phytopathogenic fungus Corynespora cassiicola

Mingming Liu1,2, Xintao Liu1, Hui Zhao1, Yunxia Ni1, Min Jiang1, Peilin Hu2,1, Hongyan Liu1,2, Bin Tian2
1Institute of Plant Protection, Henan Academy of Agricultural Sciences, Postgraduate T&R Base of Zhengzhou University, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Henan Key Laboratory of Crop Pest Control, Zhengzhou, China
2School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China

Tóm tắt

Từ khóa


Tài liệu tham khảo

Ghabrial SA, Castón JR, Jiang D et al (2015) 50-plus years of fungal viruses. Virology 479–480:356–368. https://doi.org/10.1016/j.virol.2015.02.034

Yu X, Li B, Fu Y et al (2010) A geminivirus-related DNA mycovirus that confers hypovirulence to a plant pathogenic fungus. Proc Natl Acad Sci 107:8387 LP-8392 LP. https://doi.org/10.1073/pnas.0913535107

Liu L, Xie J, Cheng J et al (2014) Fungal negative-stranded RNA virus that is related to bornaviruses and nyaviruses. Proc Natl Acad Sci 111:12205 LP-12210 LP. https://doi.org/10.1073/pnas.1401786111

Zhang R, Liu S, Chiba S et al (2014) A novel single-stranded RNA virus isolated from a phytopathogenic filamentous fungus, Rosellinia necatrix, with similarity to hypo-like viruses. Front Microbiol 5:1–12. https://doi.org/10.3389/fmicb.2014.00360

Kwon SJ, Lim WS, Park SH et al (2009) Erratum: Molecular characterization of a dsRNA mycovirus, Fusarium graminearum virus-DK21, which is phylogenetically related to hypoviruses but has a genome organization and gene expression strategy resembling those of plant potex-like viruses. Mol Cells 28:73–74. https://doi.org/10.1007/s10059-009-0112-1

Zhong J, Zhao SQ, Li GF et al (2016) A novel fusarivirus isolated from the phytopathogenic fungus Nigrospora oryzae. Virus Genes 52:891–895. https://doi.org/10.1007/s11262-016-1371-5

Marais A, Nivault A, Faure C et al (2018) Molecular characterization of a novel fusarivirus infecting the plant-pathogenic fungus Neofusicoccum luteum. Arch Virol 163:559–562. https://doi.org/10.1007/s00705-017-3620-x

Liu W, Hai D, Mu F et al (2020) Molecular characterization of a novel fusarivirus infecting the plant-pathogenic fungus Botryosphaeria dothidea. Arch Virol 165:1033–1037. https://doi.org/10.1007/s00705-020-04554-1

Gao Z, Cai L, Liu M et al (2021) A novel previously undescribed fusarivirus from the phytopathogenic fungus Setosphaeria turcica. Arch Virol 166:665–669. https://doi.org/10.1007/s00705-021-04954-x

Gong W, Liu H, Zhu X et al (2021) Molecular characterization of a novel fusarivirus infecting the plant-pathogenic fungus Alternaria solani. Arch Virol 166:2063–2067. https://doi.org/10.1007/s00705-021-05105-y

Li X, Sui K, Xie J et al (2020) Molecular characterization of a novel fusarivirus infecting the edible fungus Auricularia heimuer. Arch Virol 165:2689–2693. https://doi.org/10.1007/s00705-020-04781-6

Silva WPK, Wijesundera RLC, Karunanayake EH et al (2000) New hosts of Corynespora cassiicola in Sri Lanka. Plant Dis 84:202. https://doi.org/10.1094/pdis.2000.84.2.202d

Madriz-Ordeana K, Jrgensen HJL, Nielsen KL, Thordal-Christensen H (2016) First report of Kalanchoe leaf and stem spot caused by Corynespora cassiicola in Denmark. Plant Dis 101(101):505–505. https://doi.org/10.1094/PDIS-08-16-1173-PDN

Carris LM, Glawe DA, Gray LE (1986) Isolation of the soybean pathogens Corynespora cassiicola and Phialophora gregata from cysts of Heterodera glycines in Illinois. Mycologia 78:503–506

Sato R, Kitazawa K (1980) Occurrence of soybean root rot caused by Corynespora cassiicola (Berk. & Curt.) Wei in Hokkaido. Jpn J Phytopathol 46:193–199

Dixon LJ, Schlub RL, Pernezny K, Datnoff LE (2009) Host specialization and phylogenetic diversity of Corynespora cassiicola. Phytopathology 99:1015–1027. https://doi.org/10.1094/PHYTO-99-9-1015

Kusakari S, Okada K, Nakasone W, Tanaka Y (2009) Corynespora leaf spot of Perilla (Perilla frutescens Britt.) caused by Corynespora cassiicola (Berk. & Curt.)Wei. Jpn J Phytopathol 57:737–740

Yan XX, Yu CP, Fu XA et al (2016) CARD9 mutation linked to Corynespora cassiicola infection in a Chinese patient. Br J Dermatol 174:176–179. https://doi.org/10.1111/bjd.14082

Smith LJOY (2008) Host range, phylogenetic, and pathogenic diversity of Corynespora cassiicola (Berk. & Curt.) Wei. Ph.D. dissertations, University of Florida, Gainesville, Florida, USA

Wang Y, Zhao H, Xue C et al (2020) Complete genome sequence of a novel mycovirus isolated from the phytopathogenic fungus Corynespora cassiicola in China. Arch Virol 165:2401–2404. https://doi.org/10.1007/s00705-020-04723-2

Huang X, Madan A (1999) CAP3: a DNA sequence assembly program. Genome Res 9:868–877. https://doi.org/10.1101/gr.9.9.868

Thompson JD, Gibson TJ, Plewniak F et al (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882. https://doi.org/10.1093/nar/25.24.4876

Kumar S, Stecher G, Tamura K (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for bigger datasets. Mol Biol Evol 33:1870–1874. https://doi.org/10.1093/molbev/msw054

Gasteiger E, Hoogland C, Gattiker A et al (2005) Protein identification and analysis tools on the ExPASy server. Proteom Protoc Handb. https://doi.org/10.1385/1592598900

Liu W, Xie Y, Ma J et al (2015) IBS: an illustrator for the presentation and visualization of biological sequences. Bioinformatics 31:3359–3361. https://doi.org/10.1093/bioinformatics/btv362