Complete Chloroplast Genome Sequence of Glycine max and Comparative Analyses with other Legume Genomes

Plant Molecular Biology - Tập 59 Số 2 - Trang 309-322 - 2005
Christopher Saski1, Seung Bum Lee2, Henry Daniell2, Todd Charles Wood1, Jeffrey Tomkins1, Hyi Gyung Kim1, Robert K. Jansen3
1Clemson University Genomics Institute, Clemson University, Biosystems Research Complex, 51 New Cherry Street, Clemson, SC, 29634, USA
2Department of Molecular Biology and Microbiology, Biomolecular Science, University of Central Florida, Building #20, 4000 Central Florida Blvd, Orlando, FL, 32816-2364, USA
3Patterson Laboratories 141, Section of Integrative Biology and Institute of Cellular and Molecular Biology, University of Texas, Austin, TX, 78712, USA

Tóm tắt

Từ khóa


Tài liệu tham khảo

S.F. Altschul, 1997, Nucl. Acids Res., 25, 3389, 10.1093/nar/25.17.3389

C.M. Bowman, 1986, Curr. Genet., 10, 931, 10.1007/BF00398291

Chebolu, S. and Daniell, H. 2005. Chloroplast derived vaccine antigens and biopharmaceuticals: expression, folding, assembly and functionality. Curr Trends Microbiol Immunol (in press).

J.L. Corriveau, 1988, Amer. J. Bot., 75, 1443, 10.1002/j.1537-2197.1988.tb11219.x

M.E. Cosner, 1997, Curr. Genet., 31, 419, 10.1007/s002940050225

H. Daniell, 2002, Nat. Biotechnol., 20, 581, 10.1038/nbt0602-581

H. Daniell, 2004a, Molecular Farming, 113, 10.1002/3527603638.ch8

H. Daniell, 2004b, Molecular Biology and Biotechnology of Plant Organelles, 443, 10.1007/978-1-4020-3166-3_16

H. Daniell, 2002, Trends Plant Sci., 7, 84, 10.1016/S1360-1385(01)02193-8

H. Daniell, 2005, Trends Biotechnol., 23, 238, 10.1016/j.tibtech.2005.03.008

H. Daniell, 1998, Nat. Biotechnol., 16, 345, 10.1038/nbt0498-345

H. Daniell, 2001, J. Mol. Biol., 311, 1001, 10.1006/jmbi.2001.4921

B. DeCosa, 2001, Nat. Biotechnol., 19, 71, 10.1038/83559

G. DeGray, 2001, Plant Physiol., 127, 852, 10.1104/pp.010233

A. Dhingra, 2004, Proc. Natl. Acad. Sci. USA, 101, 6315, 10.1073/pnas.0400981101

J.J. Doyle, 1995, Syst. Bot., 20, 272, 10.2307/2419496

J.J. Doyle, 1996, Mol. Phylog. Evol., 5, 429, 10.1006/mpev.1996.0038

N. Dufourmantel, 2004, Plant Mol. Biol., 55, 479, 10.1007/s11103-004-0192-4

L. Elnitski, 2002, Genomics, 80, 681, 10.1006/geno.2002.7018

B. Ewing, 1998, Genome Res., 8, 186, 10.1101/gr.8.3.175

Fernandez-San Millan, A., Mingo-Castel, A. and Daniell, H. 2003. Chloroplast transgenic approach to hyper-express and purify human serum albumin, a protein highly susceptible to proteolytic degradation. Plant Biotechnol. J. 1: 71--79.

J.S. Gantt, 1991, EMBO J., 10, 3073, 10.1002/j.1460-2075.1991.tb07859.x

S.E. Goulding, 1996, Mol. Gen. Genet., 252, 195, 10.1007/BF02173220

C. Guda, 2000, Plant Cell Rep., 19, 257, 10.1007/s002990050008

R. Hagemann, 2004, Molecular Biology and Biotechnology of Plant Organelles, 93, 10.1007/978-1-4020-3166-3_4

F. Herdenberger, 1990, Nucl Acids Res, 18, 1297, 10.1093/nar/18.5.1297

V.D. Hipkins, 1995, Curr. Genet., 27, 572, 10.1007/BF00314450

C.J. Howe, 1985, Curr. Genet., 10, 139, 10.1007/BF00636479

H. Hupfer, 2000, Mol. Gen. Genet., 263, 581

S. Iamtham, 2000, Nat. Biotechnol., 18, 1172, 10.1038/81161

R.K. Jansen, 2005, Meth. Enzymol., 395, 348, 10.1016/S0076-6879(05)95020-9

T. Kato, 2000, DNA Res., 7, 323, 10.1093/dnares/7.6.323

E.B. Knox, 1998, Syst. Bot., 23, 109, 10.2307/2419583

M. Kota, 1999, Proc. Natl. Acad. Sci. USA, 96, 1840, 10.1073/pnas.96.5.1840

S. Kumar, 2004a, Plant Physiol., 136, 2843, 10.1104/pp.104.045187

S. Kumar, 2004b, Plant Mol. Biol., 56, 203, 10.1007/s11103-004-2907-y

S. Kurtz, 2001, Nucl. Acids Res., 29, 4633, 10.1093/nar/29.22.4633

M. Lavin, 1990, Evolution, 44, 390, 10.1111/j.1558-5646.1990.tb05207.x

S.B. Lee, 2003, Mol. Breed., 11, 1, 10.1023/A:1022100404542

Lee, S.M., Kang, K., Chung, H., Yoo, S.H., Xu, X.M., Lee,␣S.B., Cheong, J.J., Daniell, H., Kim, M., 2005. Plastid transformation in the monocotyledonous crop rice (Oryza sativa) and transmission of transgenes to their progeny. Mol. Breed. in press.

S. Leelavathi, 2003, Mol. Breed., 11, 49, 10.1023/A:1022114427971

S. Leelavathi, 2003, Mol. Breed., 11, 59, 10.1023/A:1022168321380

A. Lossl, 2003, Plant Cell Rep., 21, 891, 10.1007/s00299-003-0610-0

R.M. Maier, 1995, J. Mol. Biol., 251, 614, 10.1006/jmbi.1995.0460

R.M. Maier, 2004, Molecular Biology and Biotechnology of Plant Organelles, 115, 10.1007/978-1-4020-3166-3_5

Y. Matsuoka, 2002, Mol. Biol. Evol., 19, 2084, 10.1093/oxfordjournals.molbev.a004033

J.E. Maul, 2002, Plt. Cell, 14, 1, 10.1105/tpc.140110

K.E. McBride, 1995, Bio/Technology, 13, 362

B.G. Milligan, 1989, Mol. Biol. Evol., 6, 355

A. Molina, 2004, Plt. Biotechnol. J., 2, 141, 10.1046/j.1467-7652.2004.00057.x

K. Ohyama, 1986, Nature, 322, 572, 10.1038/322572a0

Y. Nagano, 1991, Curr. Genet., 20, 431, 10.1007/BF00317074

J.D. Palmer, 1985, Monographs in Evolutionary Biology: Molecular Evolutionary Genetics, 131, 10.1007/978-1-4684-4988-4_3

J.D. Palmer, 1991, The Molecular Biology of Plastids. Cell Culture and Somatic Cell Genetics of Plants vil 7A, 5

J.D. Palmer, 1988, Ann. Missouri. Bot. Gard., 75, 1180, 10.2307/2399279

J.D. Palmer, 1987a, Proc. Natl. Acad. Sci. USA, 84, 769, 10.1073/pnas.84.3.769

J.D. Palmer, 1987, Curr. Genet., 11, 275, 10.1007/BF00355401

J.D. Palmer, 1988, Curr. Genet., 14, 65, 10.1007/BF00405856

R.T. Pennington, 2000, Advances in Legume Systematics, part 9, 233

A.S. Perry, 2002, DNA Res., 9, 157, 10.1093/dnares/9.5.157

L.A. Raubeson, 2005, Diversity and Evolution of Plants-Genotypic and Phenotypic Variation in Higher Plants, 45, 10.1079/9780851999043.0045

O.N. Ruiz, 2003, Plt. Phys., 132, 1344, 10.1104/pp.103.020958

O.N. Ruiz, 2005, Plant Physiol, 138, 1232, 10.1104/pp.104.057729

S.E. Scott, 1999, Nat. Biotechnol., 17, 390, 10.1038/7952

B.B. Sears, 1996, Mol. Biol. Evol., 13, 850, 10.1093/oxfordjournals.molbev.a025645

D.R. Shapiro, 1986, Plt. Mol. Biol., 6, 1, 10.1007/BF00021301

A. Spielmann, 1988, Nucl. Acids Res., 16, 1199, 10.1093/nar/16.3.1199

S. Schwartz, 2003, Nucl. Acids Res., 31, 3518, 10.1093/nar/gkg579

J.M. Staub, 2000, Nat. Biotechnol., 18, 333, 10.1038/73796

J. Tang, 2004, Plt. Phys., 135, 412, 10.1104/pp.103.031245

J.S. Tregoning, 2003, Nucl. Acids Res., 31, 1174, 10.1093/nar/gkg221

P.V. Vitanen, 2004, Plt. Phys., 136, 4048, 10.1104/pp.104.050054

J. Tsudzuki, 1992, Mol. Gen. Genet., 232, 206, 10.1007/BF00279998

J. Vomstein, 1988, Mol. Gen. Genet., 213, 513, 10.1007/BF00339624

T. Wakasugi, 1994, Proc. Natl. Acad. Sci. USA, 91, 9794, 10.1073/pnas.91.21.9794

J. Watson, 2004, Vaccine, 22, 4374, 10.1016/j.vaccine.2004.01.069

M.F. Wojciechowski, 2004, Amer. J. Bot., 91, 1846, 10.3732/ajb.91.11.1846

K.H. Wolfe, 1988, Curr. Genet., 13, 97, 10.1007/BF00365763

S.K. Wyman, 2004, Bioinformatics, 20, 3252, 10.1093/bioinformatics/bth352