Colonisation dynamics of arbuscular mycorrhizal fungi and dark septate endophytes in the sugarcane crop cycle

Rhizosphere - Tập 7 - Trang 18-26 - 2018
Anders Claassens1,2, Catherine J. Nock1, Michael T. Rose2, Lukas Van Zwieten1,2, Terry J. Rose1
1Southern Cross Plant Science, Southern Cross University, Lismore NSW 2480, Australia
2NSW Department of Primary Industries, Wollongbar NSW 2477, Australia

Tài liệu tham khảo

Ambrosano, 2010, Crop rotation biomass and arbuscular mycorrhizal fungi effects on sugarcane yield, Sci. Agricola, 67, 692, 10.1590/S0103-90162010000600011 Azevedo, 2014, Early changes in arbuscular mycorrhiza development in sugarcane under two harvest management systems, Braz. J. Microbiol., 45, 995, 10.1590/S1517-83822014000300032 Ball-Coelho, 1992, Root dynamics in plant and ratoon crops of sugarcane, Plant Soil, 142, 297, 10.1007/BF00010975 Bonnett, 2014, Developmental Stages (Phenology), 35 Cavagnaro, 2002, Growth and phosphorus nutrition of a paris-type arbuscular mycorrhizal, Symbiosis, 157, 127 Claassens, 2017, Mycorrhizal fungi interactions with nutrients, pests and pathogens in sugarcane: a review, Proc. Aust. Soc. Sugar Cane Technol., 39, 326 Delaye, 2013, Endophytes versus biotrophic and necrotrophic pathogens-are fungal lifestyles evolutionarily stable traits?, Fungal Divers., 60, 125, 10.1007/s13225-013-0240-y Dickson, 2004, The Arum-Paris continuum of mycorrhizal symbioses, New Phytol., 163, 187, 10.1111/j.1469-8137.2004.01095.x Dickson, 2007, Structural differences in arbuscular mycorrhizal symbioses: more than 100 years after Gallaud, where next?, Mycorrhiza, 17, 375, 10.1007/s00572-007-0130-9 Dillewijn, 1952 Fesel, 2016, Dissecting endophytic lifestyle along the parasitism/mutualism continuum in Arabidopsis, Curr. Opin. Microbiol., 32, 103, 10.1016/j.mib.2016.05.008 Garcia, 2016, Take a trip through the plant and fungal transportome of mycorrhiza, Trends Plant Sci., 21, 937 Glover, 1967, The simultaneous growth of sugarcane roots and tops in relation to soil and climate, Proc. S. Afr. Sug. Technol. Ass., 41, 143 Glover, 1968, The behaviour of the root-system of sugarcane at and after harvest, Proc. S. Afr. Sug. Technol. Ass., 133 Gosling, 2013, Contrasting arbuscular mycorrhizal communities colonizing different host plants show a similar response to a soil phosphorus concentration gradient, New Phytol., 198, 546, 10.1111/nph.12169 Hardoim, 2015, The hidden world within plants: ecological and evolutionary considerations for defining functioning of microbial endophytes, Microbiol. Mol. Biol. Rev., 79, 293, 10.1128/MMBR.00050-14 Hart, 2002, Does percent root length colonization and soil hyphal length reflect the extent of colonization for all AMF?, Mycorrhiza, 12, 297, 10.1007/s00572-002-0186-5 Hart, 2002, Taxonomic basis for variation in the colonization strategy of arbuscular mycorrhizal fungi, New Phytol., 153, 335, 10.1046/j.0028-646X.2001.00312.x Hothorn, 2008, Simultaneous inference in general parametric models, Biom. J., 50, 346, 10.1002/bimj.200810425 Isbell, 1997 Jamal, 2004, Effect of mycorrhiza on the nutrient uptake of sugarcane, Proc. S. Afr. Sug. Technol. Ass., 78, 343 Jones, 2004, Exploring functional definitions of mycorrhizas: are mycorrhizas always mutualisms?, Can. J. Bot., 82, 1089, 10.1139/b04-110 Jumpponen, 2001, Dark septate endophytes - Are they mycorrhizal?, Mycorrhiza, 11, 207, 10.1007/s005720100112 Jumpponen, 1998, Dark septate endophytes: a review of facultative biotrophic root-colonizing fungi, New Phytol., 140, 295, 10.1046/j.1469-8137.1998.00265.x Kelly, 2001, Responses of sugarcane, maize, and soybean to phosphorus and vesicular-arbuscular mycorrhizal fungi, Aust. J. Agric. Res., 52, 731, 10.1071/AR00131 Kelly, 2005, Growth responses of sugarcane to mycorrhizal spore density and phosphorus rate, Aust. J. Agric. Res., 56, 1405, 10.1071/AR04185 Lenth, 2016, Least-squares means: the R package lsmeans, J. Stat. Softw., 69, 1, 10.18637/jss.v069.i01 Lin, 2013, Metaproteomic analysis of ratoon sugarcane rhizospheric soil, BMC Microbiol., 13, 135, 10.1186/1471-2180-13-135 Magarey, R.C., 1996. Identification of unknown root pathogens responsible for sugarcane yield decline. Retrieved from 〈http://elibrary.sugarresearch.com.au/handle/11079/769〉. Magarey, 2005, The influence of vesicular arbuscular mycorrhizae (VAM) on sugarcane growth in the field, Proc. Aust. Soc. Sugar Cane Technol., 27, 282 Magarey, 2005, Dematiaceous fungi, a cause of poor root health in sugarcane, Proc. Aust. Soc. Sugar Cane Technol., 27, 344 Magarey, 1997, Effect of the fungicide mancozeb on fungi associated with sugarcane yield decline in Queensland, Mycol. Res., 101, 858, 10.1017/S0953756297003511 Mandyam, 2005, Seeking the elusive function of the root-colonising dark septate endophytic fungi, Stud. Mycol., 53, 173, 10.3114/sim.53.1.173 Matsuoka, 2011, Sugarcane underground organs: going deep for sustainable production, Trop. Plant Biol., 4, 22, 10.1007/s12042-011-9076-3 Matsuoka, 2012, Sugarcane tillering and ratooning: key factors for a profitable cropping, 137 Mayerhofer, 2013, The effects of fungal root endophytes on plant growth: a meta-analysis, Mycorrhiza, 23, 119, 10.1007/s00572-012-0456-9 McGonigle, 1990, A new method which gives an objective measure of colonization of roots by vesicular-arbuscular mycorrhizal fungi, New Phytol., 115, 495, 10.1111/j.1469-8137.1990.tb00476.x Mehnaz, 2013, Microbes - friends and foes of sugarcane, J. Bas. Microbiol., 53, 954, 10.1002/jobm.201200299 Mercado-Blanco, 2015, Life of Microbes Inside the Plant, 25 Mickan, 2017, Molecular divergence of fungal communities in soil, roots and hyphae highlight the importance of sampling strategies, Rhizosphere, 4, 104, 10.1016/j.rhisph.2017.09.003 Müller, 2017, Quantity and distribution of arbuscular mycorrhizal fungal storage organs within dead roots, Mycorrhiza, 27, 201, 10.1007/s00572-016-0741-0 Muthukumar, 2009, Arbuscular mycorrhizal morphology in crops and associated weeds in tropical agro-ecosystems, Mycoscience, 50, 233, 10.1007/S10267-008-0475-8 Nasim, 2008, Seasonal dynamics of AM Fungi in Sugarcane (saccharum officinarum L. CV. SPF-213) in relation to Red Rot (Colletotrichum falcatum) disease from Punjab, Pakistan, Pak. J. Bot., 40, 2587 Newsham, 2011, A meta-analysis of plant responses to dark septate root endophytes, New Phytol., 190, 783, 10.1111/j.1469-8137.2010.03611.x Pankhurst, 2001, Quatification of the effects of fumigation and nematicide treatments on the early shoot and root growth of sugarcane in a yield decline soil, Proc. Aust. Soc. Sugar Cane Technol., 23, 260 Pankhurst, 2003, Management practices to improve soil health and reduce the effects of detrimental soil biota associated with yield decline of sugarcane in Queensland, Australia, Soil Tillage Res., 72, 125, 10.1016/S0167-1987(03)00083-7 Phillips, 1970, Improved procedures for clearing roots and staining parasitic and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection, Trans. Br. Mycol. Soc., 55, 158, 10.1016/S0007-1536(70)80110-3 Porras-Alfaro, 2011, Hidden fungi, emergent properties: endophytes and microbiomes, Annu. Rev. Phytopathol., 49, 291, 10.1146/annurev-phyto-080508-081831 R Core Team, 2016 Rae, 2014, Anatomy and Morphology, 19 Rai, 2014, Fungal growth promotor endophytes: a pragmatic approach towards sustainable food and agriculture, Symbiosis, 62, 63, 10.1007/s13199-014-0273-3 Rayment, 2011 Rillig, 2016, Towards an integrated mycorrhizal technology: harnessing mycorrhiza for sustainable intensification in agriculture, Front. Plant Sci., 7, 1, 10.3389/fpls.2016.01625 Rodriguez, 2009, Fungal endophytes: diversity and functional roles, New Phytol., 182, 314, 10.1111/j.1469-8137.2009.02773.x Rothen, 2017, Characterization of dark septate endophyte fungi associated with cultivated soybean at two growth stages, Appl. Soil Ecol., 120, 62, 10.1016/j.apsoil.2017.07.033 Saikkonen, 2004, Evolution of endophyte-plant symbioses, Trends Plant Sci., 9, 275, 10.1016/j.tplants.2004.04.005 Schulz, 2006, Mutualistic Interactions with Fungal Root Endophytes, 9, 261 Sieber, 2002, Fungal Root Endophytes, 887 Smith, 2005, Growth and function of the sugarcane root system, Field Crops Res., 92, 169, 10.1016/j.fcr.2005.01.017 Smith, 1997, Structural diversity in (vesicular)-arbuscular mycorrhizal symbioses, New Phytol., 137, 373, 10.1046/j.1469-8137.1997.00848.x Smith, 1991, Quantification of active vesicular-arbuscular mycorrhizal infection using image analysis and other techniques, Aust. J. Plant Physiol., 18, 637, 10.1071/PP9910637 Smith, 2008 Treseder, 2013, The extent of mycorrhizal colonization of roots and its influence on plant growth and phosphorus content, Plant Soil, 371, 1, 10.1007/s11104-013-1681-5 Van Aarle, 2005, Metabolic activity of Glomus intraradices in Arum- and Paris-type arbuscular mycorrhizal colonization, New Phytol., 166, 611, 10.1111/j.1469-8137.2005.01340.x Van Aarle, 2003, Fungal lipid accumulation and development of mycelial structures by two arbuscular mycorrhizal fungi, Appl. Environ. Microbiol., 69, 6762, 10.1128/AEM.69.11.6762-6767.2003 Verbruggen, 2013, Mycorrhizal fungal establishment in agricultural soils: factors determining inoculation success, New Phytol., 197, 1104, 10.1111/j.1469-8137.2012.04348.x Vergara, 2017, Contribution of dark septate fungi to the nutrient uptake and growth of rice plants, Braz. J. Microbiol., 49, 67, 10.1016/j.bjm.2017.04.010 Wearn, 2012, Species and organ specificity of fungal endophytes in herbaceous grassland plants, J. Ecol., 100, 1085, 10.1111/j.1365-2745.2012.01997.x Werner, 2015, Order of arrival structures arbuscular mycorrhizal colonization of plants, New Phytol., 205, 1515, 10.1111/nph.13092 Wickham, 2009 2017 Yuan, 2010, Role of diverse non-systemic fungal endophytes in plant performance and response to stress: progress and approaches, J. Plant Growth Regul., 29, 116, 10.1007/s00344-009-9112-9