Cloning of a cDNA encoding a NAD-dependent formate dehydrogenase involved in oxalic acid metabolism from the white-rot fungus<i>Ceriporiopsis subvermispora</i>and its gene expression analysis
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Aguilar C , Urzúa U , Koenig C & Vicuña R (1999) Oxalate oxidase from Ceriporiopsis subvermispora. Biochemical and cytochemical studies. Arch Biochem Biophys 366: 275â282.
Akamatsu Y , Ma DB , Higuchi T & Shimada M (1990) A novel enzymatic decarboxylation of oxalic acid by lignin peroxidase system of white-rot fungus Phanerochaete chrysosporium. FEBS Lett 269: 261â263.
Avilova TV , Egorova OA , Ioanesyan lS & Egorov AM (1985) Biosynthesis, isolation and properties of NAD-dependent formate dehydrogenase from the yeast Candida methylica. Eur J Biochem 152: 657â662.
Bradford MM (1976) A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248â254.
Chow CM & RajBhandary UL (1993) Developmental regulation of the gene for formate dehydrogenase in Neurospora crassa. J Bacteriol 175: 3703â3709.
Dutton MV & Evans CS (1996) Oxalate production by fungi: its role in pathogenicity and ecology in the soil environment. Can J Microbiol 42: 881â895.
Escutia MR , Bowater L , Edwards A , Bottrill AR , Burrull MR , Polanco R , Vicuña R & Bornemann S (2005) Cloning and sequencing of two Ceriporiopsis subvermispora bicupin oxalate oxidase allelic isoforms: implications for the reaction specificity of oxalate oxidases and decarboxylases. Appl Environ Microbiol 71: 3608â3616.
Hayashi N , Tokimatsu T , Hattori T & Shimada M (2000) An enzymatic study of an oxalate producing system in relation to the glyoxylate cycle in white-rot fungus Phanerochaete chrysosporium. Wood Res 87: 15â16.
Kirk TK , Schultz E , Connors WJ , Lorenz LR & Zeikus JG (1978) Influence of culture parameters on lignin metabolism by Phanerochaete chrysosporium. Arch Microbiol 117: 277â285.
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature 227: 680â685.
Micales J (1995) Oxalate decarboxylase in the brown-rot decay fungus Postia placenta. Mater Organismen (Berlin) 29: 177â186.
Mii K , Hattori T & Shimada M (1996) Occurrence of enzyme systems for production and decomposition of oxalate in a white-rot fungus Coriolus versicolor and characteristics of glyoxylate oxidase. Wood Res 87: 15â16.
Popov VO & Lamzin VS (1994) NAD-dependent formate dehydrogenase. Biochem J 301: 625â643.
Popp JL , Kalyanaraman B & Kirk TK (1990) Lignin peroxidase oxidation of Mn2+ in the presence of veratryl alcohol, malonic or oxalic acid and oxygen. Biochemistry 29: 10475â10480.
Sakai S , Nishide T , Munir E , Baba K , Inui H , Nakano Y , Hattori T & Shimada M (2006) Subcellular localization of glyoxylate cycle key enzymes involved in oxalate biosynthesis of wood-destroying basidiomycete Fomitopsis palustris grown on glucose. Microbiology 152: 1857â1866.
Sakai Y , Murdanoto AP , Konishi T , Tamatsu A & Kato N (1997) Regulation of the formate dehydrogenase gene, FDH1, in the methylotrophic yeast Candida boidinii and growth characteristics of an FDH1-disrupted strain on methanol, methylamine, and choline. J Bacteriol 179: 4480â4485.
Shimada M , Akamtsu Y , Tokimatsu T , Mii K & Hattori T (1997) Possible biochemical roles of oxalic acid as a low molecular weight compound involved in brown-rot and white-rot wood decays. J Biotechnol 53: 103â113.
Shimazono H (1955) Oxalic acid decarboxylase, a new enzyme from the mycelium of wood destroying fungi. J Biochem 42: 321â340.
Thompson JD , Higgins DG & Gibson TJ (1994) Clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, poison-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673â4680.
Watanabe T , Tengku S , Hattori S & Shimada M (2005) Purification and characterization of NAD-dependent formate dehydrogenase from the white-rot fungus Ceriporiopsis subvermispora and a possible role of the enzyme in oxalate metabolism. Enzyme Microb Tech 37: 68â75.