Classification and Reconstruction of a Heterogeneous Set of Electron Microscopic Images: A Case Study of GroEL–Substrate Complexes
Tài liệu tham khảo
Baker, 1996, A model-based approach for determining orientation of biological macromolecules imaged by cryoelectron microscopy, J. Struct. Biol., 116, 120, 10.1006/jsbi.1996.0020
Braig, 1994, The crystal structure of the bacterial chaperonin GroEL at 2.8 Å, Nature, 371, 578, 10.1038/371578a0
Chen, 1999, The crystal structure of a GroEL/peptide complex: Plasticity as a basis for substrate diversity, Cell, 99, 757, 10.1016/S0092-8674(00)81673-6
Chen, 1994, Location of a folding protein and shape changes in GroEL-GroES complexes imaged by cryo-electron microscopy, Nature, 371, 261, 10.1038/371261a0
Falke, 2001, Structural changes in GroEL effected by binding a denatured protein substrate, J. Mol. Biol., 10.1006/jmbi.2001.4613
Fisher, 1992, Promotion of the in vitro renaturation of dodecameric glutamine synthetase from Escherichia coli in the presence of GroEL (Chaperonin-60) and ATP, Biochemistry, 31, 3955, 10.1021/bi00131a010
Fisher, 1993, On the assembly of dodecameric glutamine synthetase from stable chaperonin complexes, J. Biol. Chem., 269, 13629, 10.1016/S0021-9258(17)36876-X
Frank, 1996, SPIDER and WEB: Processing and visualization of images in 3D electron microsocpy and other fields, J. Struct. Biol., 116, 190, 10.1006/jsbi.1996.0030
Harauz, 1984, Direct three-dimensional reconstruction for macromolecular complexes from electron micrographs, Ultramicroscopy, 12, 309, 10.1016/0304-3991(83)90245-0
Langer, 1992, Chaperonin-mediated protein folding: GroES binds to one end of the GroEL cylinder, which accommodates the protein substrate within its central cavity, EMBO J., 11, 4757, 10.1002/j.1460-2075.1992.tb05581.x
Llorca, 1997, Symmetric GroEL-GroES complexes can contain substrate simultaneously in both GroEL rings, FEBS Lett., 405, 195, 10.1016/S0014-5793(97)00186-5
Penczek, 1994, The ribosome at improved resolution: New techniques for merging and orientation refinement in 3D cryoelectron microscopy of biological particles, Ultramicroscopy, 53, 251, 10.1016/0304-3991(94)90038-8
Penczek, 1992, Three-dimensional reconstruction of single particles embedded in ice, Ultramicroscopy, 40, 33, 10.1016/0304-3991(92)90233-A
Penczek, 1996, A common-lines based method for determining orientations for N > 3 particle projections simultaneously, Ultramicroscopy, 63, 205, 10.1016/0304-3991(96)00037-X
Roseman, 1996, The chaperonin ATPase cycle: Mechanism of allosteric switching and movements of substrate-binding domains in GroEL, Cell, 87, 241, 10.1016/S0092-8674(00)81342-2
Saibil, 1993, ATP induces large quaternary rearrangements in a cage-like chaperonin structure, Curr. Biol., 3, 265, 10.1016/0960-9822(93)90176-O
Schoehn, 2000, Three conformations of an archaeal chaperonin, TF55 from Sulfolobus shibatae, J. Mol. Biol., 296, 813, 10.1006/jmbi.2000.3505
van Heel, M.1984Three-dimensional reconstruction with unknown angular relationships. In Proceedings of the 8th European Congress on Electron Microscopy, pp. 1347–1348, Electron Microscopy Foundation, Budapest.
Xu, 1997, The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex, Nature, 388, 741, 10.1038/41944
Yamashita, 1989, Refined atomic model of glutamine synthetase at 3.5 A resolution, J. Biol. Chem., 264, 17681, 10.1016/S0021-9258(19)84625-2