Circadian expression of clock genes in purified hematopoietic stem cells is developmentally regulated in mouse bone marrow

Hastings, 2003, A clockwork web: circadian timing in brain and periphery, in health and disease, Nat Rev Neurosci, 4, 649, 10.1038/nrn1177 Storch, 2002, Extensive and divergent circadian gene expression in liver and heart, Nature, 417, 78, 10.1038/nature744 Panda, 2002, Coordinated transcription of key pathways in the mouse by the circadian clock, Cell, 109, 307, 10.1016/S0092-8674(02)00722-5 Oishi, 1998, Humoral signals mediate the circadian expression of rat period homologue (rPer2) mRNA in peripheral tissues, Neurosci Lett, 256, 117, 10.1016/S0304-3940(98)00765-4 Oishi, 2003, Genome-wide expression analysis of mouse liver reveals CLOCK-regulated circadian output genes, J Biol Chem, 278, 41519, 10.1074/jbc.M304564200 Damiola, 2000, Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus, Genes Dev, 14, 2950, 10.1101/gad.183500 Muhlbauer, 2004, Indication of circadian oscillations in the rat pancreas, FEBS Lett, 564, 91, 10.1016/S0014-5793(04)00322-9 Balsalobre, 1998, A serum shock induces circadian gene expression in mammalian tissue culture cells, Cell, 93, 929, 10.1016/S0092-8674(00)81199-X Kennaway, 2003, Rhythmic expression of clock and clock controlled genes in the rat oviduct, Mol Hum Reprod, 9, 503, 10.1093/molehr/gag067 Boivin, 2003, Circadian clock genes oscillate in human peripheral blood mononuclear cells, Blood, 102, 4143, 10.1182/blood-2003-03-0779 Kusanagi, 2004, Similar profiles in human period1 gene expression in peripheral mononuclear and polymorphonuclear cells, Neurosci Lett, 365, 124, 10.1016/j.neulet.2004.04.065 Yamamoto, 2004, Transcriptional oscillation of canonical clock genes in mouse peripheral tissues, BMC Mol Biol, 5, 18, 10.1186/1471-2199-5-18 Yoo, 2004, Inaugural article: PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues, PNAS, 101, 5339, 10.1073/pnas.0308709101 Stokkan, 2001, Entrainment of the circadian clock in the liver by feeding, Science, 291, 490, 10.1126/science.291.5503.490 Morse, 2003, No circadian rhythms in testis: Period1 expression is clock independent and developmentally regulated in the mouse, Mol Endocrinol, 17, 141, 10.1210/me.2002-0184 Alvarez, 2005, The thymus is similar to the testis in its pattern of circadian clock gene expression, J Biol Rhythms, 20, 111, 10.1177/0748730404274078 Smaaland, 2002, Rhythms in human bone marrow and blood cells, Chronobiol Int, 19, 101, 10.1081/CBI-120002594 Abrahamsen, 1997, Circadian cell cycle variations of erythro- and myelopoiesis in humans, Eur J Haematol, 58, 333, 10.1111/j.1600-0609.1997.tb01680.x Smaaland, 1992, Colony forming unit-granulocyte-macrophage and DNA synthesis of human bone marrow are circadian stage-dependent and show covariation, Blood, 79, 2281, 10.1182/blood.V79.9.2281.bloodjournal7992281 D'Hondt, 2004, Circadian variations of bone marrow engraftability, J Cell Physiol, 200, 63, 10.1002/jcp.20032 Filipski, 2004, Persistent twenty-four hour changes in liver and bone marrow despite suprachiasmatic nuclei ablation in mice, Am J Physiol Regul Integr Comp Physiol, 287, R844, 10.1152/ajpregu.00085.2004 Bourin, 2002, In-vitro circadian rhythm of murine bone marrow progenitor production, Chronobiol Int, 19, 57, 10.1081/CBI-120002677 Chen, 2000, Expression of mPer1 and mPer2, two mammalian clock genes, in murine bone marrow, Biochem Biophys Res Comm, 276, 724, 10.1006/bbrc.2000.3536 Granda, 2004, Circadian regulation of cell cycle and apoptosis proteins in mouse bone marrow and tumor, FASEB J, 19, 304 Tsinkalovsky, 2005, Clock gene expression in purified mouse hematopoietic stem cells, Exp Hematol, 33, 100, 10.1016/j.exphem.2004.09.007 Lapidot, 2002, Current understanding of stem cell mobilization: the roles of chemokines, proteolytic enzymes, adhesion molecules, cytokines, and stromal cells, Exp Hematol, 30, 973, 10.1016/S0301-472X(02)00883-4 Spees, 2003, Differentiation, cell fusion, and nuclear fusion during ex vivo repair of epithelium by human adult stem cells from bone marrow stroma, PNAS, 100, 2397, 10.1073/pnas.0437997100 Filipski, 2004, Effects of chronic jet lag on tumor progression in mice, Cancer Res, 64, 7879, 10.1158/0008-5472.CAN-04-0674 Claustrat, 1984, A chronobiological study of melatonin and cortisol secretion in depressed subjects: plasma melatonin, a biochemical marker in major depression, Biol Psychiatry, 19, 1215 Rollag, 1976, Radioimmunoassay of serum concentrations of melatonin in sheep exposed to different lighting regimens, Endocrinology, 98, 482, 10.1210/endo-98-2-482 Goodell, 1996, Isolation and functional properties of murine hematopoietic stem cells that are replicating in vivo, J Exp Med, 183, 1797, 10.1084/jem.183.4.1797 Tamaru, 2003, Nucleocytoplasmic shuttling and phosphorylation of BMAL1 are regulated by circadian clock in cultured fibroblasts, Genes Cells, 8, 973, 10.1046/j.1365-2443.2003.00686.x User bulletin no. 2 ABI PRISM 7700 Sequence Detection System. Available at http://docs.appliedbiosystems.com/pebiodocs/04303859.pdf Vandesompele, 2002, Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes, Genome Biol, 3, 10.1186/gb-2002-3-7-research0034 Mojon, 1992, Chronolab: an interactive software package for chronobiologic time series analysis written for the Macintosh computer, Chronobiol Int, 9, 403, 10.3109/07420529209064552 Bjarnason, 2001, Circadian expression of clock genes in human oral mucosa and skin: association with specific cell-cycle phases, Am J Pathol, 158, 1793, 10.1016/S0002-9440(10)64135-1 Filipski, 2002, Host circadian clock as a control point in tumor progression, J Natl Cancer Inst, 94, 690, 10.1093/jnci/94.9.690 Li, 2000, Relationship of atypical melatonin rhythm with two circadian clock outputs in B6D2F(1) mice, Am J Physiol Regul Integr Comp Physiol, 278, R924, 10.1152/ajpregu.2000.278.4.R924 Matsuo, 2003, Control mechanism of the circadian clock for timing of cell division in vivo, Science, 302, 255, 10.1126/science.1086271 Arai, 2004, Tie2/angiopoietin-1 signaling regulates hematopoietic stem cell quiescence in the bone marrow niche, Cell, 118, 149, 10.1016/j.cell.2004.07.004 Park, 2002, Differential gene expression profiling of adult murine hematopoietic stem cells, Blood, 99, 488, 10.1182/blood.V99.2.488 Phillips, 2000, The genetic program of hematopoietic stem cells, Science, 288, 1635, 10.1126/science.288.5471.1635 Zhang, 2000, Identification of four human cDNAs that are differentially expressed by early hematopoietic progenitors, Exp Hematol, 28, 1286, 10.1016/S0301-472X(00)00539-7 Ivanova, 2002, A stem cell molecular signature, Science, 298, 601, 10.1126/science.1073823 Akashi, 2003, Transcriptional accessibility for genes of multiple tissues and hematopoietic lineages is hierarchically controlled during early hematopoiesis, Blood, 101, 383, 10.1182/blood-2002-06-1780 Raaijmakers, 2002, Quantitative assessment of gene expression in highly purified hematopoietic cells using real-time reverse transcriptase polymerase chain reaction, Exp Hematol, 30, 481, 10.1016/S0301-472X(02)00787-7 Bustin, 2002, Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems, J Mol Endocrinol, 29, 23, 10.1677/jme.0.0290023 Preitner, 2002, The orphan nuclear receptor REV-ERB[alpha] controls circadian transcription within the positive limb of the mammalian circadian oscillator, Cell, 110, 251, 10.1016/S0092-8674(02)00825-5 Sato, 2004, A functional genomics strategy reveals Rora as a component of the mammalian circadian clock, Neuron, 43, 527, 10.1016/j.neuron.2004.07.018 Guillaumond, 2005, Differential control of Bmal1 circadian transcription by REV-ERB and ROR nuclear receptors, J Biol Rhythms, 20, 391, 10.1177/0748730405277232 Teboul, 2005, Atypical patterns of circadian clock gene expression in human peripheral blood mononuclear cells, J Mol Med, 83, 693, 10.1007/s00109-005-0697-6 Lopez-Molina, 1997, The DBP gene is expressed according to a circadian rhythm in the suprachiasmatic nucleus and influences circadian behavior, EMBO J, 16, 6762, 10.1093/emboj/16.22.6762 Gachon, 2004, The mammalian circadian timing system: from gene expression to physiology, Chromosoma, 113, 103, 10.1007/s00412-004-0296-2