Characterization of MSlys, the endolysin of Streptococcus pneumoniae phage MS1

Biotechnology Reports - Tập 28 - Trang e00547 - 2020
Maria Daniela Silva1, Hugo Oliveira1, Alberta Faustino2, Sanna Sillankorva3
1CEB, Centre of Biological Engineering, LIBRO–Laboratório de Investigação em Biofilmes Rosário Oliveira, University of Minho, 4710-057 Braga, Portugal
2Clinical Pathology Department, Hospital de Braga, 4710-243 Braga, Portugal
3INL - International Iberian Nanotechnology Laboratory, Avenida Mestre José Veiga, 4715-330 Braga, Portugal

Tài liệu tham khảo

Weiser, 2018, Streptococcus pneumoniae: transmission, colonization and invasion, Nat. Rev. Microbiol., 16, 355, 10.1038/s41579-018-0001-8 Andrade, 2011, Pneumococcal disease manifestation in children before and after vaccination: what’s new?, Vaccine, 29, C2, 10.1016/j.vaccine.2011.06.096 World Health Organization WHO, 2007, Pneumococcal conjugate vaccine for childhood immunization - WHO position paper, Bull. Epidemiol. Inf. Receiv., 82, 93 Donlan, 2002, Biofilms: Microbial life on surfaces, Emerg. Infect. Dis., 8, 881, 10.3201/eid0809.020063 Costerton, 1999, Bacterial biofilms: a common cause of persistent infections, Science, 284, 1318, 10.1126/science.284.5418.1318 Tacconelli, 2017, 1 López, 2004, Recent trends on the molecular biology of pneumococcal capsules, lytic enzymes, and bacteriophage, FEMS Microbiol. Rev., 28, 553, 10.1016/j.femsre.2004.05.002 Kot, 2017, Complete genome sequence of Streptococcus pneumoniae virulent Phage MS1, Genome Announc., 5, 4, 10.1128/genomeA.00333-17 Loeffler, 2001, Rapid killing of Streptococcus pneumoniae with a bacteriophage cell wall hydrolase, Science, 294, 2170, 10.1126/science.1066869 Loeffler, 2003, Synergistic lethal effect of a combination of phage lytic enzymes with different activities on penicillin-sensitive and -resistant Streptococcus pneumoniae strains, Antimicrob. Agents Chemother., 47, 375, 10.1128/AAC.47.1.375-377.2003 Djurkovic, 2005, Synergistic killing of Streptococcus pneumoniae with the bacteriophage lytic enzyme Cpl-1 and penicillin or gentamicin depends on the level of penicillin resistance, Antimicrob. Agents Chemother., 49, 1225, 10.1128/AAC.49.3.1225-1228.2005 Loeffler, 2003, Phage lytic enzyme Cpl-1 as a novel antimicrobial for pneumococcal bacteremia, Infect. Immun., 71, 6199, 10.1128/IAI.71.11.6199-6204.2003 Entenza, 2005, Therapeutic effects of bacteriophage Cpl-1 lysin against Streptococcus pneumoniae endocarditis in rats, Antimicrob. Agents Chemother., 49, 4789, 10.1128/AAC.49.11.4789-4792.2005 McCullers, 2007, Novel strategy to prevent otitis media caused by colonizing Streptococcus pneumoniae, PLoS Pathog., 3, e28, 10.1371/journal.ppat.0030028 Maestro, 2016, Choline binding proteins from Streptococcus pneumoniae: a dual role as enzybiotics and targets for the design of new antimicrobials, Antibiotics, 5, 21, 10.3390/antibiotics5020021 Finn, 2016, The Pfam protein families database: towards a more sustainable future, Nucleic Acids Res., 44, D279, 10.1093/nar/gkv1344 Sigrist, 2013, New and continuing developments at PROSITE, Nucleic Acids Res. Gasteiger, 2005, Protein identification and analysis tools on the ExPASy server, 571 Larkin, 2007, Clustal W and Clustal X version 2.0, Bioinformatics, 10.1093/bioinformatics/btm404 Sambrook, 2001 Harhala, 2018, Safety studies of pneumococcal endolysins Cpl-1 and Pal, Viruses, 10, 638, 10.3390/v10110638 Oliveira, 2016, Structural and enzymatic characterization of ABgp46, a novel phage endolysin with broad anti-Gram-negative bacterial activity, Front. Microbiol., 7, 1, 10.3389/fmicb.2016.00208 Compton, 1986, Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication, Anal. Biochem., 155, 155, 10.1016/0003-2697(86)90241-1 Van Stokkum, 1990, Estimation of protein secondary structure and error analysis from circular dichroism spectra, Anal. Biochem., 10.1016/0003-2697(90)90396-Q Whitmore, 2004, DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data, Nucleic Acids Res., 10.1093/nar/gkh371 McGuffin, 2000, The PSIPRED protein structure prediction server, Bioinformatics, 10.1093/bioinformatics/16.4.404 Centers for Disease Control and Prevention, Conventional PCR Serotype Deduction Protocols, (n.d.). https://www.cdc.gov/streplab/pneumococcus/resources.html. Pai, 2006, Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniaeisolates, J. Clin. Microbiol., 44, 124, 10.1128/JCM.44.1.124-131.2006 Merritt, 2005, Growing and analyzing static biofilms Sheehan, 1997, The lytic enzyme of the pneumococcal phage Dp-1: a chimeric lysin of intergeneric origin, Mol. Microbiol., 25, 717, 10.1046/j.1365-2958.1997.5101880.x Domenech, 2011, In vitro destruction of Streptococcus pneumoniae biofilms with bacterial and phage peptidoglycan hydrolases, Antimicrob. Agents Chemother., 55, 4144, 10.1128/AAC.00492-11 Kurola, 2010, Presence of capsular locus genes in immunochemically identified encapsulated and unencapsulated Streptococcus pneumoniae sputum isolates obtained from elderly patients with acute lower respiratory tract infection, J. Med. Microbiol., 59, 1140, 10.1099/jmm.0.016956-0 Xu, 2011, Nontypeable Streptococcus pneumoniae as an otopathogen, Diagn. Microbiol. Infect. Dis., 69, 200, 10.1016/j.diagmicrobio.2010.09.019 Keller, 2016, Nonencapsulated Streptococcus pneumoniae: emergence and pathogenesis, MBio, 7, 1, 10.1128/mBio.01792-15 Murrah, 2015, Nonencapsulated Streptococcus pneumoniae causes otitis media during single-species infection and during polymicrobial infection with nontypeable Haemophilus influenzae, Pathog. Dis., 73, 1, 10.1093/femspd/ftu011 Portuguese Directorate-General of Health, 2017, 1 Blázquez, 2016, PL3 amidase, a tailor-made lysin constructed by domain shuffling with potent killing activity against pneumococci and related species, Front. Microbiol., 7, 1, 10.3389/fmicb.2016.01156 Bustamante, 2010, Cpl-7, a lysozyme encoded by a pneumococcal bacteriophage with a novel cell wall-binding motif, J. Biol. Chem., 285, 33184, 10.1074/jbc.M110.154559 Díez-Martínez, 2013, Improving the lethal effect of Cpl-7, a pneumococcal phage lysozyme with broad bactericidal activity, by inverting the net charge of its cell wall-binding module, Antimicrob. Agents Chemother., 57, 5355, 10.1128/AAC.01372-13 Varea, 2004, Structural and thermodynamic characterization of Pal, a phage natural chimeric lysin active against Pneumococci, J. Biol. Chem., 279, 43697, 10.1074/jbc.M407067200 Diez-Martinez, 2015, A novel chimeric phage lysin with high in vitro and in vivo bactericidal activity against Streptococcus pneumoniae, J. Antimicrob. Chemother., 70, 1763, 10.1093/jac/dkv038 Sanz, 1990, Structural studies of the lysozyme coded by the pneumococcal phage Cp-1. Conformational changes induced by choline, Eur. J. Biochem., 187, 409, 10.1111/j.1432-1033.1990.tb15319.x Levander, 2017, Variation in normal ear temperature, Am. J. Med. Sci., 354, 370, 10.1016/j.amjms.2017.05.013 Wezyk, 2000, pH of fluid collected from middle ear in the course of otitis media in children, Otolaryngol. Pol., 54, 131 Maestro, 2007, Inhibition of pneumococcal choline-binding proteins and cell growth by esters of bicyclic amines, FEBS J., 274, 364, 10.1111/j.1742-4658.2006.05584.x Hall-Stoodley, 2006, Direct detection of bacterial biofilms on the middle-ear mucosa of children with chronic otitis media, JAMA, 296, 202, 10.1001/jama.296.2.202 Hoa, 2009, Identification of adenoid biofilms with middle ear pathogens in otitis-prone children utilizing SEM and FISH, Int. J. Pediatr. Otorhinolaryngol., 73, 1242, 10.1016/j.ijporl.2009.05.016 Vázquez, 2019, Synergy between two chimeric lysins to kill Streptococcus pneumoniae, Front. Microbiol., 10, 1, 10.3389/fmicb.2019.01251 Resch, 2011, A stable phage lysin (Cpl-1) dimer with increased antipneumococcal activity and decreased plasma clearance, Int. J. Antimicrob. Agents, 38, 516, 10.1016/j.ijantimicag.2011.08.009