Characterization of JDP genes, an evolutionarily conserved J domain-only protein family, from human and moths

Jieun Lee1, Yoonsoo Hahn1, Ji Hye Yun1, Kazuei Mita2, Jae Hoon Chung1
1Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Taejon 305-701, South Korea
2Genome Research Group, National Institute of Radiological Sciences, Anagawa 4-9-1, Inage-ku, Chiba 263-8555, Japan

Tài liệu tham khảo

Bukau, 1998, The Hsp70 and Hsp60 chaperone machines, Cell, 92, 351, 10.1016/S0092-8674(00)80928-9 Rudiger, 1997, Interaction of Hsp70 chaperones with substrates, Nat. Struct. Biol., 4, 342, 10.1038/nsb0597-342 Mayer, 1998, Hsp70 chaperone systems: diversity of cellular functions and mechanism of action, Biol. Chem., 379, 261 Caplan, 1991, Characterization of YDJ1: a yeast homologue of the bacterial dnaJ protein, J. Cell Biol., 114, 609, 10.1083/jcb.114.4.609 Rowley, 1994, Mdj1p, a novel chaperone of the DnaJ family, is involved in mitochondrial biogenesis and protein folding, Cell, 77, 249, 10.1016/0092-8674(94)90317-4 Ohtsuka, 1993, Cloning of a cDNA for heat-shock protein hsp40, a human homologue of bacterial DnaJ, Biochem. Biophys. Res. Commun., 197, 235, 10.1006/bbrc.1993.2466 Blumberg, 1991, A homologue of the bacterial heat-shock gene DnaJ that alters protein sorting in yeast, Nature, 349, 627, 10.1038/349627a0 Raabe, 1991, A human homologue of the Escherichia coli DnaJ heat-shock protein, Nucleic Acids Res., 19, 6645, 10.1093/nar/19.23.6645 Kanazawa, 1997, HSDJ, a human homolog of DnaJ, is farnesylated and is involved in protein import into mitochondria, J. Biochem., 121, 890, 10.1093/oxfordjournals.jbchem.a021670 Andres, 1996, Expression cloning of a novel farnesylated protein, RDJ2, encoding a DnaJ protein homologue, Arch. Biochem. Biophys., 346, 113, 10.1006/abbi.1997.0296 Kelley, 1997, The T/t common exon of simian virus 40, JC, and BK polyomavirus T antigens can functionally replace the J-domain of the Escherichia coli DnaJ molecular chaperone, Proc. Natl. Acad. Sci. USA, 94, 3679, 10.1073/pnas.94.8.3679 Buchner, 1997, The DnaJ-like cysteine string protein and exocytotic neurotransmitter release, Trends Neurosci., 20, 223, 10.1016/S0166-2236(96)10082-5 Sadler, 1989, A yeast gene important for protein assembly into the endoplasmic reticulum and the nucleus has homology to DnaJ, an Escherichia coli heat shock protein, J. Cell Biol., 109, 2665, 10.1083/jcb.109.6.2665 Zhang, 1992, Zuotin, a putative Z-DNA binding protein in Saccharomyces cerevisiae, EMBO J., 11, 3787, 10.1002/j.1460-2075.1992.tb05464.x Ungewickell, 1995, Role of auxilin in uncoating clathrin-coated vesicles, Nature, 378, 632, 10.1038/378632a0 Syken, 1999, TID1, a human homolog of the Drosophila tumor suppressor l(2)tid, encodes two mitochondrial modulators of apoptosis with opposing functions, Proc. Natl. Acad. Sci. USA, 96, 8499, 10.1073/pnas.96.15.8499 Pellecchia, 1996, NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone, J. Mol. Biol., 260, 236, 10.1006/jmbi.1996.0395 Huang, 1999, The influence of C-terminal extension on the structure of the ‘J-domain’ in E. coli DnaJ, Protein Sci., 8, 203, 10.1110/ps.8.1.203 Qian, 1996, Nuclear magnetic resonance solution structure of the human Hsp40 (HDJ-1) J-domain, J. Mol. Biol., 260, 224, 10.1006/jmbi.1996.0394 Kelley, 1998, The J-domain family and the recruitment of chaperone power, Trends Biochem. Sci., 23, R222, 10.1016/S0968-0004(98)01215-8 Kelly, 1999, Molecular chaperones: how J domains turn on Hsp70s, Curr. Biol., 9, 305, 10.1016/S0960-9822(99)80185-7 Hahn, 1999, Structural analysis of phylogenetically conserved J domain protein gene, Biochim. Biophys. Acta, 1447, 325, 10.1016/S0167-4781(99)00162-1 Altschul, 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res., 25, 3389, 10.1093/nar/25.17.3389 Huang, 1992, A contig assembly program based on sensitive detection of fragment overlaps, Genomics, 14, 18, 10.1016/S0888-7543(05)80277-0 Mita, 1999, The construction of EST database for genome analysis of Bombyx mori, RIKEN Rev., 22, 63 H.M. Robertson, R. Martos, C.R. Sears, E.Z. Todres, K.K.O. Walden, J.B. Nardi, Diversity of odorant binding proteins revealed by an expressed sequence tag project on male Manduca sexta moth antennae, Insect Mol. Biol., in press. Church, 1984, Genomic sequencing, Proc. Natl. Acad. Sci. USA, 81, 1991, 10.1073/pnas.81.7.1991 Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673 Bateman, 1999, Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins, Nucleic Acids Res., 27, 260, 10.1093/nar/27.1.260 Pearson, 1988, Improved tools for biological sequence analysis, Proc. Natl. Acad. Sci. USA, 85, 2444, 10.1073/pnas.85.8.2444 Aguinaldo, 1997, Evidence for a clade of nematodes, arthropods and other moulting animals, Nature, 387, 489, 10.1038/387489a0 Olson, 1989, A common language for physical mapping of the human genome, Science, 245, 1434, 10.1126/science.2781285 Deloukas, 1998, A physical map of 30,000 human genes, Science, 282, 744, 10.1126/science.282.5389.744 Blake, 1999, The Mouse Genome Database (MGD): genetic and genomic information about the laboratory mouse. The Mouse Genome Database Group, Nucleic Acids Res., 27, 95, 10.1093/nar/27.1.95