Characteristics of monolayer formation in vitro by the chytrid Batrachochytrium dendrobatidis

Longcore, 1999, Batrachochytrium dendrobatidis gen. et sp. nov., a chytrid pathogenic to amphibians, Mycologia, 91, 219, 10.1080/00275514.1999.12061011 Yu, 2006, Chytridiomycosis and amphibian population declines, CHINESE J Zool, 41, 118 Borovsky, 1975, Purification and properties of potato 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-(1,4-alpha-glucano)-transferase. Evidence against a dual catalytic function in amylose-branching enzyme, Eur J Biochem, 59, 615, 10.1111/j.1432-1033.1975.tb02490.x Wake, 2008, Are we in the midst of the sixth mass extinction? A view from the world of amphibians, Proc Natl Acad Sci, 105, 11466, 10.1073/pnas.0801921105 Fisher, 2009, Global emergence of Batrachochytrium dendrobatidis and amphibian chytridiomycosis in space, time, and host, Annu Rev Microbiol, 63, 291, 10.1146/annurev.micro.091208.073435 Hyatt, 2010, Amphibian chytridiomycosis, Dis Aquat Organ, 92, 89, 10.3354/dao02308 Hernandez, 2014, Amphibian chytridiomycosis: a threat to global biodiversity, Int J Aquat Sci, 5, 94 Berger, 2005, Life cycle stages of the amphibian chytrid Batrachochytrium dendrobatidis, Dis Aquat Organ, 68, 51, 10.3354/dao068051 Piotrowski, 2004, Physiology of Batrachochytrium dendrobatidis , a chytrid pathogen of amphibians, Mycologia, 96, 9, 10.1080/15572536.2005.11832990 Ohmer, 2017, Skin sloughing in susceptible and resistant amphibians regulates infection with a fungal pathogen, Sci Rep, 10.1038/s41598-017-03605-z Voyles, 2009, Pathogenesis of chytridiomycosis, a cause of catastrophic amphibian declines, Science, 326, 582, 10.1126/science.1176765 Wu, 2019, Mechanistic basis for the loss of water balance in green tree frogs infected with a fungal pathogen, Am J Physiol Integr Comp Physiol, 10.1152/ajpregu.00355.2018 Kirshtein, 2007, Quantitative PCR detection of Batrachochytrium dendrobatidis DNA from sediments and water, Dis Aquat Organ, 77, 11, 10.3354/dao01831 Chestnut, 2014, Heterogeneous occupancy and density estimates of the pathogenic fungus Batrachochytrium dendrobatidis in waters of North America, PLoS One, 9, 10.1371/journal.pone.0106790 Garmyn, 2012, Waterfowl: potential environmental reservoirs of the chytrid fungus Batrachochytrium dendrobatidis, PLoS One, 7, 10.1371/journal.pone.0035038 McMahon, 2013, Chytrid fungus Batrachochytrium dendrobatidis has nonamphibian hosts and releases chemicals that cause pathology in the absence of infection, Proc Natl Acad Sci, 110, 210, 10.1073/pnas.1200592110 Liew, 2017, Chytrid fungus infection in zebrafish demonstrates that the pathogen can parasitize non-amphibian vertebrate hosts, Nat Commun, 8, 15048, 10.1038/ncomms15048 Shapard, 2012, Batrachochytrium dendrobatidis can infect and cause mortality in the nematode Caenorhabditis elegans, Mycopathologia, 173, 121, 10.1007/s11046-011-9470-2 Brutyn, 2012, Batrachochytrium dendrobatidis zoospore secretions rapidly disturb intercellular junctions in frog skin, Fungal Genet Biol, 49, 830, 10.1016/j.fgb.2012.07.002 Moss, 2008, Chemotaxis of the amphibian pathogen Batrachochytrium dendrobatidis and its response to a variety of attractants, Mycologia, 100, 1, 10.1080/15572536.2008.11832493 Djordjevic, 2002, Microtiter plate assay for assessment of Listeria monocytogenes biofilm formation, Appl Environ Microbiol, 68, 2950, 10.1128/AEM.68.6.2950-2958.2002 Azeredo, 2003, Extraction of exopolymers from biofilms: the protective effect of glutaraldehyde, Water Sci Technol, 47, 175, 10.2166/wst.2003.0312 Wu, 2014, Biofilm-specific extracellular matrix proteins of nontypeable Haemophilus influenzae, Pathog Dis, 72, 143 Santander, 2013, Mechanisms of intrinsic resistance to antimicrobial peptides of Edwardsiella ictaluri and its influence on fish gut inflammation and virulence, Microbiology, 159, 1471, 10.1099/mic.0.066639-0 Bray, 2016, Near-optimal probabilistic RNA-seq quantification, Nat Biotechnol, 34, 525, 10.1038/nbt.3519 Kunze, 1975, Effects of psychotropic drugs on prostaglandin biosynthesis in vitro, J Pharm Pharmacol, 27, 880, 10.1111/j.2042-7158.1975.tb10239.x Pimentel, 2017, Differential analysis of RNA-seq incorporating quantification uncertainty, Nat Methods, 14, 687, 10.1038/nmeth.4324 Benjamini, 1995, Controlling the false discovery rate: a practical and powerful approach to multiple testing, J R Stat Soc Ser B Metsalu, 2015, A web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap, Nucleic Acids Res, 10.1093/nar/gkv468 Törönen, 2018, PANNZER2: a rapid functional annotation web server, Nucleic Acids Res, 10.1093/nar/gky350 Martel, 2011, Developing a safe antifungal treatment protocol to eliminate Batrachochytrium dendrobatidis from amphibians, Med Mycol, 49, 143, 10.3109/13693786.2010.508185 Altman, 1976, Tetrazolium salts and formazans, Prog Histochem Cytochem, 9, 1, 10.1016/S0079-6336(76)80015-0 Dohnalkova, 2011, Imaging hydrated microbial extracellular polymers: comparative analysis by electron microscopy, Appl Environ Microbiol, 77, 1254, 10.1128/AEM.02001-10 Holden, 2014, Evaluation of amphotericin B and chloramphenicol as alternative drugs for treatment of chytridiomycosis and their impacts on innate skin defenses, Appl Environ Microbiol, 80, 4034, 10.1128/AEM.04171-13 Stockwell, 2015, Effects of pond salinization on survival rate of amphibian hosts infected with the chytrid fungus, Conserv Biol, 29, 391, 10.1111/cobi.12402 Stockwell, 2015, Evidence of a salt refuge: chytrid infection loads are suppressed in hosts exposed to salt, Oecologia, 177, 901, 10.1007/s00442-014-3157-6 Di Bonaventura, 2006, Biofilm formation by the emerging fungal pathogen Trichosporon asahii: development, architecture, and antifungal resistance, Antimicrob Agents Chemother, 50, 3269, 10.1128/AAC.00556-06 Kaur, 2014, Biofilm formation by Aspergillus fumigatus, Med Mycol, 52, 2 Martinez, 2015, Biofilm Formation by Cryptococcus neoformans, Microbiol Spectr, 3, 1, 10.1128/microbiolspec.MB-0006-2014 Chandra, 2001, Biofilm formation by the fungal pathogen Candida albicans: development, architecture, and drug resistance, J Bacteriol, 183, 5385, 10.1128/JB.183.18.5385-5394.2001 Martinez, 2007, Cryptococcus neoformans biofilm formation depends on surface support and carbon source and reduces fungal cell susceptibility to heat, cold, and UV light, Appl Environ Microbiol, 73, 4592, 10.1128/AEM.02506-06 Beauvais, 2009, Characterization of a biofilm-like extracellular matrix in FLO1-expressing Saccharomyces cerevisiae cells, FEMS Yeast Res, 9, 411, 10.1111/j.1567-1364.2009.00482.x Zarnowski, 2014, Novel entries in a fungal biofilm matrix encyclopedia, mBio, 5, 10.1128/mBio.01333-14 Faria-Oliveira, 2015, Elemental biochemical analysis of the polysaccharides in the extracellular matrix of the yeast Saccharomyces cerevisiae, J Basic Microbiol, 55, 685 Yang, 2006, Radial spoke proteins of Chlamydomonas flagella, J Cell Sci, 10.1242/jcs.02811 Oh, 2014, Role of alkyl hydroperoxide reductase (AhpC) in the biofilm formation of Campylobacter jejuni, PLoS One, 9, 10.1371/journal.pone.0087312 Jang, 2016, Endogenous hydrogen peroxide increases biofilm formation by inducing exopolysaccharide production in Acinetobacter oleivorans DR1, Sci Rep, 6, 21121, 10.1038/srep21121 Benamara, 2011, Impact of the biofilm mode of growth on the inner membrane phospholipid composition and lipid domains in Pseudomonas aeruginosa, Biochim Biophys Acta, 1808, 98, 10.1016/j.bbamem.2010.09.004 Dubois-Brissonnet, 2016, The biofilm lifestyle involves an increase in bacterial membrane saturated fatty acids, Front Microbiol, 7, 1673, 10.3389/fmicb.2016.01673 Li, 2013, ECM17-dependent methionine/cysteine biosynthesis contributes to biofilm formation in Candida albicans, Fungal Genet Biol, 51, 50, 10.1016/j.fgb.2012.11.010 Davies, 2009, A fatty acid messenger is responsible for inducing dispersion in microbial biofilms, J Bacteriol, 191, 1393, 10.1128/JB.01214-08 Amari, 2013, The putative enoyl-coenzyme A hydratase DspI is required for production of the Pseudomonas aeruginosa biofilm dispersion autoinducer cis-2-decenoic acid, J Bacteriol, 195, 4600, 10.1128/JB.00707-13 Marques, 2015, Control of biofilms with the fatty acid signaling molecule cis-2-Decenoic acid, Pharmaceuticals, 8, 816, 10.3390/ph8040816 Schieber, 2014, ROS function in redox signaling and oxidative stress, Curr Biol, 10.1016/j.cub.2014.03.034 Müller, 2016, Allicin induces thiol stress in bacteria through S-allylmercapto modification of protein cysteines, J Biol Chem, 291, 11477, 10.1074/jbc.M115.702308 Giotis, 2008, Genomic and proteomic analysis of the alkali-tolerance response (AlTR) in Listeria monocytogenes 10403S, BMC Microbiol, 10.1186/1471-2180-8-102 Giotis, 2010, Transcriptome analysis of alkali shock and alkali adaptation in Listeria monocytogenes 10403S, Foodb Pathog Dis, 10.1089/fpd.2009.0501 Panmanee, 2009, Differential roles of OxyR-controlled antioxidant enzymes alkyl hydroperoxide reductase (AhpCF) and catalase (KatB) in the protection of Pseudomonas aeruginosa against hydrogen peroxide in biofilm vs. planktonic culture, FEMS Microbiol Lett, 295, 238, 10.1111/j.1574-6968.2009.01605.x Wang, 2009, Contribution of oxidative damage to antimicrobial lethality, Antimicrob Agents Chemother, 53, 1395, 10.1128/AAC.01087-08 Muñoz, 2018, Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species, Nat Commun, 10.1038/s41467-018-07779-6 Finkelstein, 1973, Aqueous pores created in thin lipid membranes by the polyene antibiotics nystatin and amphotericin B, Membranes Mesa-Arango, 2014, The production of reactive oxygen species is a universal action mechanism of amphotericin B against pathogenic yeasts and contributes to the fungicidal effect of this drug, Antimicrob Agents Chemother, 10.1128/AAC.03570-14 Liu, 2017, Morphological and transcriptomic analysis reveals the osmoadaptive response of endophytic fungus Aspergillus montevidensis ZYD4 to high salt stress, Front Microbiol Bosch, 2015, Successful elimination of a lethal wildlife infectious disease in nature, Biol Lett, 11, 20150874, 10.1098/rsbl.2015.0874