Chapter 23 Analysis of apoptosis in plant cells

Andree, 1990, Binding of vascular anticoagulant α (VAC α) to planar phospholipid bilayers, J. Biol. Chem., 265, 4923, 10.1016/S0021-9258(19)34062-1 Ayling, 1994, The cytoplasmic streaming response of tomato root hairs to auxin; observations of cytosolic calcium levels, J. Plant Physiol., 143, 184, 10.1016/S0176-1617(11)81684-6 Binding, 1974, Regeneration of haploid and diploid plants from protoplasts of Petunia hybrids L, Z. Pflanzenphysiol., 74, 327, 10.1016/S0044-328X(75)80161-9 Bush, 1990, Measuring intracellular Ca2+ levels in plant cells using the fluorescent probes, Indo-1 and Fura-2, Plant Physiol., 93, 841, 10.1104/pp.93.3.841 Castedo, 1996, Sequential acquisition of mitochondrial and plasma membrane alterations during early lymphocyte apoptosis, J. Immunol., 157, 512, 10.4049/jimmunol.157.2.512 Darzynkiewicz, 1990, Probing nuclear chromatin by flow cytometry, 315 Darzynkiewicz, 1994, Acid-induced denaturation of DNA in situ as a probe of chromatin structure, Vol. 41, 527 Darzynkiewicz, 1992, Features of apoptotic cells measured by flow cytometry, Cytometry, 13, 795, 10.1002/cyto.990130802 Darzynkiewicz, 1993, Altered sensitivity of DNA in situ to denaturation in apoptotic cells, Ann. N.Y. Acad. Sci., 677, 334, 10.1111/j.1749-6632.1993.tb38788.x Darzynkiewicz, 1994, Assays of cell viability: Discrimination of cells dying by apoptosis, Vol. 41, 15 Dive, 1992, Analysis and discrimination of necrosis and apoptosis (programmed cell death) by multiparameter flow cytometry, Biochim. Biophys. Acta, 1133, 275, 10.1016/0167-4889(92)90048-G Earnshaw, 1995, Apoptosis: Lessons from in vitro systems, Trends Cell Biol., 5, 217, 10.1016/S0962-8924(00)89006-6 Elliott, 1990, Measurement of cytoplasmic free calcium in plant protoplasts, Plant Sci., 67, 125, 10.1016/0168-9452(90)90058-V Fadok, 1992, Exposure of phosphatidylserine on the surface of apoptotic lymphocytes triggers specific recognition and removal by macrophages, J. Immunol., 148, 2207, 10.4049/jimmunol.148.7.2207 Fukuda, 1980, Establishment of an experimental system for the study of tracheary element differentiation from single cells isolated from the mesophyll of Zinnia elegans, Plant Physiol., 65, 57, 10.1104/pp.65.1.57 Galbraith, 1983, Rapid flow cytometric analysis of the cell cycle in intact plant tissues, Science, 220, 1049, 10.1126/science.220.4601.1049 Givan, 1992 Gold, 1994, Differentiation between cellular apoptosis and necrosis by the combined use of in situ tailing and nick translation techniques, Lab. Invest., 71, 219 Gorczyca, 1993, Detection of DNA strand breaks in individual apoptotic cells by the in situ terminal deoxynucleotidyl transferase and nick translation assays, Cancer Res., 53, 1945 Groover, 1997, Programmed cell death of plant tracheary elements differentiating in vitro, Protoplasma, 196, 197, 10.1007/BF01279568 Hale, 1996, Apoptosis: Molecular regulation of cell death, Eur. J. Biochem., 236, 1, 10.1111/j.1432-1033.1996.00001.x Hotz, 1992, Changes in nuclear chromatin related to apoptosis or necrosis induced by the DNA topoisomerase 11 inhibitor fostriecin in MOLT-4 and HL-60 cells are revealed by altered DNA sensitivity to denaturation, Exp. Cell Res., 201, 184, 10.1016/0014-4827(92)90362-C Hotz, 1994, Flow cytometric detection of apoptosis: Comparison of the assays of in situ DNA degradation and chromatin changes, Cytometry, 15, 237, 10.1002/cyto.990150309 Kerr, 1972, Apoptosis: A basic biological phenomenon with wide-ranging implications in tissue kinetics, Br. J. Cancer, 26, 239, 10.1038/bjc.1972.33 Koopman, 1994, Annexin V for flow cytometric detection of phosphatidylserine expression on B cells undergoing apoptosis, Blood, 84, 1415, 10.1182/blood.V84.5.1415.bloodjournal8451415 Levine, 1996, Calcium-mediated apoptosis in a plant hypersensitive disease resistance response, Curr. Biol., 6, 427, 10.1016/S0960-9822(02)00510-9 McCabe, 1997, A programmed cell death pathway activated in carrot cells cultured at low cell density, Plant J., 12, 267, 10.1046/j.1365-313X.1997.12020267.x Malgaroli, 1987, Fura-2 measurement of cytosolic free Ca2+ in monolayers and suspensions of various types of animal cells, J. Cell Biol., 105, 2145, 10.1083/jcb.105.5.2145 Martin, 1995, Early redistribution of plasma membrane phospatidylserine is a general feature of apoptosis regardless of the initiating stimulus: Inhibition by overexpression of Bcl-2 and Abl, J. Exp. Med., 182, 1545, 10.1084/jem.182.5.1545 Mittler, 1995, In situ detection of nDNA fragmentation during the differentiation of tracheary elements in higher plants, Plant Physiol., 108, 489, 10.1104/pp.108.2.489 O'Brien, 1993, Protoplasts to plants in Gentianaceae. Regeneration of lisianthus (Eustoma grandiflorum) is affected by calcium ion preconditioning, osmolality and pH of the culture media, Plant Cell Tissue Organ Cult., 33, 31, 10.1007/BF01997595 O'Brien, 1997, The use of annexin V and TUNEL to monitor the progression of apoptosis in plants, Cytometry, 29, 28, 10.1002/(SICI)1097-0320(19970901)29:1<28::AID-CYTO2>3.0.CO;2-9 O'Brien, 1998, The early stages in the pathway for apoptosis in plant cells are reversible, Plant J., 13, 803, 10.1046/j.1365-313X.1998.00087.x O'Brien, 1998, Major changes in chromatin condensation suggest the presence of an apoptotic pathway in plant cells, Exp. Cell Res., 241, 46, 10.1006/excr.1998.4036 Orzaez, 1997, DNA fragmentation is regulated by ethylene during carpel senescence in Pisum sativum, Plant J., 11, 137, 10.1046/j.1365-313X.1997.11010137.x Pennell, 1997, Programmed cell death in plants, Plant Cell, 9, 1157, 10.1105/tpc.9.7.1157 Petit, 1992, Flow cytometric analysis of rhodamine 123 fluorescence during modulation of the membrane potential in plant mitochondria, Plant Physiol., 98, 279, 10.1104/pp.98.1.279 Petit, 1996, Mitochondria and programmed cell death: Back to the future, FEBS Lett., 396, 7, 10.1016/0014-5793(96)00988-X Ryerson, 1996, Cleavage of nuclear DNA into oligonucleosomal fragments during cell death induced by fungal infection or by abiotic treatments, Plant Cell, 8, 393, 10.1105/tpc.8.3.393 Sgorbati, 1993, Chromatin structure variation in successful and unsuccessful arbuscular mycorrhizas of pea, Protoplasma, 175, 1, 10.1007/BF01403279 Steinberg, 1988, A prelysosomal compartment sequesters membrane-impermeant fluorescent dyes from the cytoplasmic matrix of J774 macrophages, J. Cell Biol., 107, 887, 10.1083/jcb.107.3.887 Tait, 1989, Phospholipid binding properties of human placental anticoagulant protein-1, a member of the lipocortin family, J. Biol. Chem., 264, 7944, 10.1016/S0021-9258(18)83133-7 Van Engeland, 1996, A novel assay to measure loss of plasma membrane asymmetry during apoptosis of adherent cells in culture, Cytometry, 24, 131, 10.1002/(SICI)1097-0320(19960601)24:2<131::AID-CYTO5>3.0.CO;2-M Vermes, 1995, A novel assay for apoptosis. Flow cytometric detection of phosphatidylserine expression on early apoptotic cells using fluorescein labelled annexin V, J. Immunol. Methods, 184, 39, 10.1016/0022-1759(95)00072-I Wang, 1996, Apoptosis: A functional paradigm for programmed cell death induced by a host-selective phytotoxin and invoked during development, Plant Cell, 8, 375, 10.1105/tpc.8.3.375 Wyllie, 1980, Cell death: The significance of apoptosis, Int. Rev. Cytol., 68, 251, 10.1016/S0074-7696(08)62312-8 Zhang, 1998, Determination of intracellular Ca2+ in cells of intact wheat roots: Loading of acetoxymethyl ester of Fluo-3 under low temperature, Plant J., 15, 147, 10.1046/j.1365-313X.1998.00188.x