Changes of gut microbiota structure in rats infected with Toxoplasma gondii
Tóm tắt
Từ khóa
Tài liệu tham khảo
Afgan, 2018, The galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update, Nucleic Acids Res., 46, W537, 10.1093/nar/gky379
Almeria, 2021, Foodborne transmission of toxoplasma gondii infection in the last decade, overview. Res. vet Sci., 135, 371, 10.1016/j.rvsc.2020.10.019
Benedetto, 1996, Susceptibility to toxoplasmosis: correlation between macrophage function, brain cyst formation and mortality in rats, New microbiol, 19, 47
Blacher, 2019, Potential roles of gut microbiome and metabolites in modulating ALS in mice, Nature, 572, 474, 10.1038/s41586-019-1443-5;
Bolyen, 2019, Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2, Nat. Biotechnol., 37, 852, 10.1038/s41587-019-0209-9
Burger, 2018, Loss of paneth cell autophagy causes acute susceptibility to toxoplasma gondii-mediated inflammation, Cell Host Microbe, 23, 177, 10.1016/j.chom.2018.01.001
Callahan, 2016, DADA2: High-resolution sample inference from illumina amplicon data, Nat. Methods, 13, 581, 10.1038/nmeth.3869
Cani, 2022, Akkermansia muciniphila: paradigm for next-generation beneficial microorganisms, Nat. Rev. Gastroenterol. Hepatol, 10.1038/s41575-022-00631-9
Cerutti, 2020, The bradyzoite: A key developmental stage for the persistence and pathogenesis of toxoplasmosis, Pathog. (Basel Switzerland), 9, 10.3390/pathogens9030234
Cervantes-Barragan, 2019, CRTAM protects against intestinal dysbiosis during pathogenic parasitic infection by enabling Th17 maturation, Front. Immunol., 10, 10.3389/fimmu.2019.01423
Chen, 2018, Fastp: an ultra-fast all-in-one FASTQ preprocessor, Bioinf. (Oxford England), 34, i884, 10.1093/bioinformatics/bty560
Couturier-Maillard, 2018, Interleukin-22-deficiency and microbiota contribute to the exacerbation of toxoplasma gondii-induced intestinal inflammation, Mucosal Immunol., 11, 1181, 10.1038/s41385-018-0005-8
Derosa, 2022, Intestinal akkermansia muciniphila predicts clinical response to PD-1 blockade in patients with advanced non-small-cell lung cancer, Nat. Med., 28, 315, 10.1038/s41591-021-01655-5
Dubey, 2020, All about toxoplasmosis in cats: the last decade, Vet Parasitol., 283, 109145, 10.1016/j.vetpar.2020.109145
Dubey, 2016, Experimental toxoplasmosis in rats induced orally with eleven strains of toxoplasma gondii of seven genotypes: Tissue tropism, tissue cyst size, neural lesions, tissue cyst rupture without reactivation, and ocular lesions, PloS One, 11, 10.1371/journal.pone.0156255
Dubey, 1998, Toxoplasmosis of rats: a review, with considerations of their value as an animal model and their possible role in epidemiology, Vet Parasitol., 77, 1, 10.1016/S0304-4017(97)00227-6
Dubey, 1998, Structures of toxoplasma gondii tachyzoites, bradyzoites, and sporozoites and biology and development of tissue cysts, Clin. Microbiol. Rev., 11, 267, 10.1128/CMR.11.2.267
Dubey, 2021, Epidemiological significance of toxoplasma gondii infections in wild rodents: 2009-2020, J. Parasitol., 107, 182, 10.1645/20-121
Dunay, 2018, Treatment of toxoplasmosis: Historical perspective, animal models, and current clinical practice, Clin. Microbiol. Rev., 31, 10.1128/CMR.00057-17
Flemer, 2017, Fecal microbiota variation across the lifespan of the healthy laboratory rat, Gut Microbes, 8, 428, 10.1080/19490976.2017.1334033
Gao, 2015, Investigation of infectivity of neonates and adults from different rat strains to toxoplasma gondii prugniaud shows both variation which correlates with iNOS and arginase-1 activity and increased susceptibility of neonates to infection, Exp. Parasitol., 149, 47, 10.1016/j.exppara.2014.12.008
Hildebrand, 2013, Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice, Genome Biol., 14, R4, 10.1186/gb-2013-14-1-r4
Hou, 2018, Genotyping and virulence analysis of toxoplasma gondii isolates from a dead human fetus and dead pigs in jiangsu province, Eastern China, Acta parasitol, 63, 397, 10.1515/ap-2018-0046
Howe, 1995, Toxoplasma gondii comprises three clonal lineages: correlation of parasite genotype with human disease, J. Infect. Dis., 172, 1561, 10.1093/infdis/172.6.1561
Jiang, 2013, Genetic characterization of toxoplasma gondii from pigs from different localities in China by PCR-RFLP, Parasites Vectors, 6, 227, 10.1186/1756-3305-6-227
Jin, 2022, β-glucan-triggered akkermansia muciniphila expansion facilitates the expulsion of intestinal helminth via TLR2 in mice, Carbohydr. polymers, 275, 118719, 10.1016/j.carbpol.2021.118719
Khan, 2011, Genetic analyses of atypical toxoplasma gondii strains reveal a fourth clonal lineage in north America, Int. J. Parasitol., 41, 645, 10.1016/j.ijpara.2011.01.005
Lambert, 2006, Induction of dendritic cell migration upon toxoplasma gondii infection potentiates parasite dissemination, Cell. Microbiol., 8, 1611, 10.1111/j.1462-5822.2006.00735.x
Liesenfeld, 1996, Association of CD4+ T cell-dependent, interferon-gamma-mediated necrosis of the small intestine with genetic susceptibility of mice to peroral infection with toxoplasma gondii, J. Exp. Med., 184, 597, 10.1084/jem.184.2.597
Li, 2014, Phylogeny and virulence divergency analyses of toxoplasma gondii isolates from China, Parasites Vectors, 7, 133, 10.1186/1756-3305-7-133
Liu, 2022, Life lactobacillus rhamnosus GG colonisation inhibits intestinal tumour formation, Br. J. Cancer, 126, 1421, 10.1038/s41416-021-01562-z
Liu, 2021, Trichinella spiralis infection decreases the diversity of the intestinal flora in the infected mouse, J. microbiol immunol infection = Wei mian yu gan ran za zhi, 54, 490, 10.1016/j.jmii.2019.09.009
Li, 2012, Differences in iNOS and arginase expression and activity in the macrophages of rats are responsible for the resistance against t. gondii infection, PloS One, 7, 10.1371/journal.pone.0035834
Loeuillet, 2019, Toxoplasma hypervirulence in the rat model parallels human infection and is modulated by the Toxo1 locus, Front. Cell. infection Microbiol., 9, 10.3389/fcimb.2019.00134
Machado, 2021, Toxoplasma gondii infection impairs the colonic motility of rats due to loss of myenteric neurons, Neurogastroenterol. Motil. Off. J. Eur. Gastroint Motil. Soc., 33, 10.1111/nmo.13967
Menghini, 2019, Neutralization of IL-1α ameliorates crohn's disease-like ileitis by functional alterations of the gut microbiome, Proc. Natl. Acad. Sci. United States America, 116, 26717, 10.1073/pnas.1915043116
Oksanen, 2020, Vegan community ecology package version 2.5-7 November 2020
Olson, 2018, The gut microbiota mediates the anti-seizure effects of the ketogenic diet, Cell, 173, 1728, 10.1016/j.cell.2018.04.027
Parker, 2020, The genus alistipes: Gut bacteria with emerging implications to inflammation, cancer, and mental health, Front. Immunol., 11, 10.3389/fimmu.2020.00906
Quast, 2012, The SILVA ribosomal RNA gene database project: improved data processing and web-based tools, Nucleic Acids Res., 41, D590, 10.1093/nar/gks1219
Sanchez, 2021, The pathogenicity and virulence of toxoplasma gondii, Virulence, 12, 3095, 10.1080/21505594.2021.2012346
Schneider, 2018, Toxoplasma gondii promotes changes in VIPergic submucosal neurons, mucosal intraepithelial lymphocytes, and goblet cells during acute infection in the ileum of rats, Neurogastroenterol. Motil. Off. J. Eur. Gastroint Motil. Soc., 30, 10.1111/nmo.13264
Sergent, 2005, Innate refractoriness of the Lewis rat to toxoplasmosis is a dominant trait that is intrinsic to bone marrow-derived cells, Infection Immun., 73, 6990, 10.1128/IAI.73.10.6990-6997.2005
Shao, 2020, Changes to the gut microbiota in mice induced by infection with toxoplasma gondii, Acta tropica, 203, 105301, 10.1016/j.actatropica.2019.105301
Sibley, 2004, Intracellular parasite invasion strategies, Sci. (New York NY), 304, 248, 10.1126/science.1094717
Sibley, 1992, Virulent strains of toxoplasma gondii comprise a single clonal lineage, Nature, 359, 82, 10.1038/359082a0
Snyder, 2020, From initiators to effectors: Roadmap through the intestine during encounter of toxoplasma gondii with the mucosal immune system, Front. Cell. infection Microbiol., 10, 10.3389/fcimb.2020.614701
Sturge, 2014, Complex immune cell interplay in the gamma interferon response during toxoplasma gondii infection, Infection Immun., 82, 3090, 10.1128/IAI.01722-14
Su, 2002, Identification of quantitative trait loci controlling acute virulence in toxoplasma gondii, Proc. Natl. Acad. Sci. United States America, 99, 10753, 10.1073/pnas.172117099
Suss-Toby, 1996, Toxoplasma invasion: the parasitophorous vacuole is formed from host cell plasma membrane and pinches off via a fission pore, Proc. Natl. Acad. Sci. United States America, 93, 8413, 10.1073/pnas.93.16.8413
Taggart, 2022, Gut microbiota composition does not associate with toxoplasma infection in rats, Mol. Ecol, 31, 3963, 10.1111/mec.16552
Tonin, 2013, E-NTPDase and e-ADA activities in lymphocytes associated with the immune response of rats experimentally infected with toxoplasma gondii, Exp. Parasitol., 135, 325, 10.1016/j.exppara.2013.07.014
Trevizan, 2016, Kinetics of acute infection with toxoplasma gondii and histopathological changes in the duodenum of rats, Exp. Parasitol., 165, 22, 10.1016/j.exppara.2016.03.015
Wang, 2015, Seroprevalence and genetic characterization of toxoplasma gondii in cancer patients in anhui province, Eastern China, Parasites Vectors, 8, 162, 10.1186/s13071-015-0778-5
Wang, 2016, Seroprevalence and genotypes of toxoplasma gondii isolated from pigs intended for human consumption in liaoning province, northeastern China, Parasites Vectors, 9, 248, 10.1186/s13071-016-1525-2
Yan, 2022, Study on the effect of koumiss on the intestinal microbiota of mice infected with toxoplasma gondii, Sci. Rep., 12, 1271, 10.1038/s41598-022-05454-x
Zenner, 1999, Infection with toxoplasma gondii RH and prugniaud strains in mice, rats and nude rats: kinetics of infection in blood and tissues related to pathology in acute and chronic infection, Pathol Res. Pract., 195, 475, 10.1016/S0344-0338(99)80051-X