Challenges of antibiotic resistance biofilms and potential combating strategies: a review
Tóm tắt
Từ khóa
Tài liệu tham khảo
Alves MJ, Isabel CFR, Ferreira IL, Eduardo C, Anabela M, Manuela P (2014) Wild mushroom extracts as inhibitors of bacterial biofilm formation. Pathogens 3(3):667–679
An SQ, Murtagh J, Twomey KB, Gupta MK, Sullivan TP, Ingram R, Tang JL (2019) Modulation of antibiotic sensitivity and biofilm formation in Pseudomonas aeruginosa by interspecies signal analogues. Nat Commun. 10(1):1–11
Arciola CR, Montanaro L, Costerton JW (2011) New trends in diagnosis and control strategies for implant infections. Int J Artif Organs 34(09):727–736
Ayrapetyan M, Williams TC, Oliver JD (2015) Bridging the gap between viable but non-culturable and antibiotic persistent bacteria. Trends Microbiol 23:7–13
Barraud N, Schleheck D, Klebensberger J, Webb JS, Hassett DJ, Rice SA, Kjelleberg S (2009) Nitric oxide signaling in Pseudomonas aeruginosa biofilms mediates phosphodiesterase activity, decreased cyclic di-GMP levels, and enhanced dispersal. J Bacteriol 191:7333–7342
Bekele, ST, Abay, GK, Gelaw, B, Tessema, B (2018) Bacterial biofilms; links to pathogenesis and resistance mechanism. https://doi.org/10.20944/preprints201807.0598.v1
Bengtsson-Palme J, Gunnarsson L, Larsson DJ (2018) Can branding and price of pharmaceuticals guide informed choices towards improved pollution control during manufacturing? J Clean Prod 171:137–146
Berendonk TU, Manaia CM, Merlin C, Fatta-Kassinos D, Cytryn E, Walsh FM (2015) JL Tackling antibiotic resistance: the environmental framework. Nat Rev Microbiol 13(5):310–317
Blair JM, Webber MA, Baylay AJ, Ogbolu DO, Piddock LJ (2015) Molecular mechanisms of antibiotic resistance. Nat Rev Microbiol 13:42–51
Brauner A, Fridman O, Gefen O (2016) Distinguishing between resistance, tolerance and persistence to antibiotic treatment. Nat Rev Microbiol 14:320–330
Briggs T, Blunn G, Hislop S (2018) Antimicrobial photodynamic therapy-a promising treatment for prosthetic joint infections. Lasers Med Sci 33(03):523–532
Camargo AC, Woodward JJ, Call DR, Nero LA (2017) Listeria monocytogenes in food-processing facilities, food contamination, and human listeriosis: the Brazilian Scenario. Foodborne Pathog Dis 14:623–636
Cascioferro S, Carbone D, Parrino B, Pecoraro C, Giovannetti E, Cirrincione G, Diana P (2021) Therapeutic strategies to counteract antibiotic resistance in MRSA biofilm-associated infections. Med Chem 16(1):65–80
Cascioferro S, Parrino B, Petri GL, Cusimano MG, Schillaci D, Di Sarno V, Musella S, Giovannetti E, Cirrincione G, Diana P (2019) 2, 6-Disubstituted imidazo [2, 1-b] [1, 3, 4] thiadiazole derivatives as potent staphylococcal biofilm inhibitors. Eur J Med Chem 167:200–210
Castano AP, Demidova TN, Hamblin MR (2005) Mechanisms in photodynamic therapy: part two-cellular signaling, cell metabolismand modes of cell death. Photodiagn Photodyn Ther 2(01):1–23
Chowdhury N, Wood TL, Martínez-Vázquez M, García-Contreras R, Wood TK (2016) DNA-crosslinker cisplatin eradicates bacterial persister cells. Biotechnol Bioeng 113(09):1984–1992
Coenye T, Brackman G, Rigole P (2012) Eradication of Propioni bacterium acnes biofilms by plant extracts and putative identification of icariin, resveratrol and salidroside as active compounds. Phytomedicine 19(5):409–412
Cox G, Wright GD (2013) Intrinsic antibiotic resistance: mechanisms, origins, challenges and solutions. Int J Med Microbiol 303:287–292
Cranston, D, Sidebottom, E (2016) Penicillin and the legacy of Norman Heatley. Words by Design. Oxford (England). ISBN 9781909075467
Darouiche RO, Mansouri MD, Gawande PV, Madhyastha S (2009) Antimicrobial and antibiofilm efficacy of triclosan and DispersinB combination. J Antimicrob Chemother 64(01):88–93
Davies D (2003) Understanding biofilm resistance to antibacterial agents. Nat Rev 5:6-12
Davies D (2003) Understanding biofilm resistance to antibacterial agents. Nat Rev Drug Discov 2(2):114–122
Dörr T, Vulić M, Lewis K (2010) Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli. PLoS Biol 8(2):1000317
Ernest EP, Machi AS, Karolcik BA, LaSala PR, Dietz MJ (2018) Topical adjuvants incompletely remove adherent Staphylococcus aureus from implant materials. J Orthop Res 36(06):1599–1604
Fernández J, Greenwood-Quaintance KE, Patel R (2016) In vitro activity of dalbavancin against biofilms of staphylococci isolated from prosthetic joint infections. Diagn Microbiol Infect Dis 85(04):449–451
Flemming HC, Wingender J, Szewzyk U, Steinberg P, Rice SA, Kjelleberg S (2016) Biofilms: an emergent form of bacterial life. Nat Rev Microbiol 14:563–575
Fratamico PM, Annous BA, Guenther NW (2009) Biofilms in the Food and Beverage Industries. Woodhead Publishing, Sawston, pp 1–580
Galié S, García-Gutiérrez C, Miguélez EM, Villar CJ, Lombó F (2018) Biofilms in the food industry: health aspects and control methods. Front Microbiol 9:898
Giannelli M, Landini G, Materassi F (2017) Effects of photodynamic laser and violet-blue led irradiation on Staphylococcus aureus biofilm and Escherichia coli lipopolysaccharide attached to moderately rough titanium surface: in vitro study. Lasers Med Sci 32(04):857–864
Gião MS, Keevil CW (2014) Listeria monocytogenes can form biofilms in tap water and enter into the viable but non-cultivable state. Microb Ecol 67:603–611
Gopal N, Hill C, Ross PR, Beresford TP, Fenelon MA, Cotter PD (2015) The prevalence and control of Bacillus and related spore-forming bacteria in the dairy industry. Front Microbial 6:1418
Gries CM, Kielian T (2017) Staphylococcal biofilms and immune polarization during prosthetic joint infection. J Am Acad Orthop Surg 25(Suppl 1):S20–S24
Gupta P, Sarkar S, Das B, Bhattacharjee S, Tribedi P (2016) Biofilm, pathogenesis and prevention -a journey to break the wall: a review. Arch Microbial 198:1–15
Hall CW, Mah TF (2017) Molecular mechanisms of biofilm-based antibiotic resistance and tolerance in pathogenic bacteria. FEMS MIcrobo Rec 41(3):276–301
Hernández-Sierra JF, Ruiz F, Cruz Pena DC (2008) The antimicrobial sensitivity of Streptococcus mutans to nanoparticles of silver, zinc oxide, and gold. Nanomed 4:237–240
Hochbaum AI, Kolodkin-Gal I, Foulston L, Kolter R, Aizenberg J, Losick R (2011) Inhibitory effects of D-amino acids on Staphylococcus aureus biofilm development. J Bacteriol 193:5616–5622
Hoffmann N, Lee B, Hentzer M, Rasmussen TB, Song Z, Johansen HK, Givskov M, Høiby N (2007) Azithromycin blocks quorum sensing and alginate polymer formation and increases the sensitivity to serum and stationary-growth-phase killing of Pseudomonas aeruginosa and attenuates chronic P. aeruginosa lung infection in Cftr2/2 mice. Antimicrob Agents Chemother 51:3677–3687
Høiby N, Bjarnsholt T, Givskov M, Molin S, Ciofu O (2010) Antibiotic resistance of bacterial biofilms. Int J Antimicrob Agents 35(04):322–332
Hughes G, Webber MA (2017) Novel approaches to the treatment of bacterial biofilm infections. Br J Pharmacol 174:2237–2246
Iannitelli A, Grande R, Di Stefano A, Di Giulio M, Sozio P, Bessa LJ, Laserra S, Paolini C, Protasi F, Cellini L (2011) Potential antibacterial activity of carvacrol-loaded poly (DL-lactide-co-glycolide) (PLGA) nanoparticles against microbial biofilm. Int J Mol Sc 12(8):5039–5051
Jolivet-Gougeon A, Bonnaure-Mallet M (2014) Biofilms as a mechanism of bacterial resistance. Drug Discov Today Technol 11:49–56
Jones-Dias D, Manageiro V, Caniça M (2016) Influence of agricultural practice on mobile blagenes: Inc I1-bearing CTX-M, SHV, CMY and TEM in Escherichia coli from intensive farming soils. Environ Microbiol 18:260–272
Kalpana BJ, Aarthy S, Pandian SK (2012) Antibiofilm activity of α-amylase from Bacillus subtilis S8–18 against biofilm forming human bacterial pathogens. Appl Biochem Biotechnol 167(6):1778–1794
Kaplan JB (2009) Therapeutic potential of biofilm-dispersing enzymes. Int J Artif Organs 32(09):545–554
Kaur G, Balamurugan P, Vasudevan S, Jadav S, Princy SA (2017) Antimicrobial and Antibiofilm potential of acyclic amines and diamines against multi-drug resistant Staphylococcus aureus. Front Microbiol 8:1767
Khan F, Pham DTN, Kim Y (2020) Alternative strategies for the application of aminoglycoside antibiotics against the biofilm-forming human pathogenic bacteria. Appl Microbiol Biotechnol 104:1955–1976
Kobayashi K, Ikemoto Y (2019) Biofilm-associated toxin and extracellular protease cooperatively suppress competitors in Bacillus subtilis biofilms. PLoS Genet 15(10):1008232
Kolodkin-Gal I, Cao S, Chai L, Bo¨ttcher T, Kolter R, Clardy J, Losick R (2012) A self-produced trigger for biofilm disassembly that targets exopolysaccharide. Cell 149:684–692
Koo H, Allan RN, Howlin RP, Stoodley P, HallStoodley L (2017) Targeting microbial biofilms: current and prospective therapeutic strategies. Nat Rev Microbiol 15:740–755
Kulshrestha S, Khan S, Hasan S, Khan ME, Misba L, Khan AU (2016) Calcium fluoride nanoparticles induced suppression of Streptococcus mutans biofilm: an in vitro and in vivo approach. Appl Microbiol Biotechnol 100:1901–1914
Kulshrestha S, Khan S, Meena R, Khan AU (2014) A graphene/zinc oxide nanocomposite film protects dental implant surfaces against cariogenic Streptococcus mutans. Biofouling 30:1281–1294
Larsson DGJ, Andremont A, Bengtsson-Palme J, Brandt KK, Husman AMR, Patriq Fagerstedt P, Jerker Fick J, Carl-Fredrik Flach CF, Gaze WH, Makoto Kuroda M, Kvint K, Laxminarayan R, Manaia CM, Nielsen KM, Plant L, Ploy MC, Segovia C, Simonet P, Smalla K, Snape J, Topp E, Hengel AJV, Verner-Jeffreys DW, Virta MPJ, Wellington EM, Wernersson AS (2018) Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance. Environ Int 117:132–138
Laxminarayan R, Amábile-Cuevas CF, Cars O, EvansT Heymann DL, Hoffman S, Holmes A, Mendelson M, Sridhar D, Woolhouse M, Røttingen JA (2016) UN High-Level Meeting on antimicrobials—what do we need? The Lancet 388(10041):218–220
Lerch TZ, Chenu C, Dignac MF, Barriuso E, Mariotti A (2017) Biofilm vs planktonic lifestyle : consequences for pesticide 2, 4-D metabolism by Cupriavidus necator. Front Microbiol 8:1–11
Li J, Ma L, Liao X (2018) Ultrasound-induced Escherichia coli O157: H7 cell death exhibits physical disruption and biochemical apoptosis. Front Microbiol 9:2486
Li YJ, Harroun SG, Su YC (2016) Synthesis of self-assembled spermidine-carbon quantum dots effective against multidrugresistant bacteria. Adv Healthc Mater 5(19):2545–2554
Lonn-Stensrud J, Landin MA, Benneche T, Petersen FC, Scheie AA (2009) Furanones, potential agents for preventing Staphylococcus epidermidis biofilm infections. J Antimicrob Chemother 63:309–316
Malhotra R, Dhawan B, Garg B, Shankar V, Nag TC (2019) A comparison of bacterial adhesion and biofilm formation on commonly used orthopaedic metal implant materials: an in vitro study. Indian J Orthop 53(01):148–153
Manaia CM (2017) Assessing the risk of antibiotic resistance transmission from the environment to humans: non-direct proportionality between abundance and risk. Trends Microbiol 25(3):173–181
McCarty S, Percival SL, Hunt JA, Woods EJ (2014) The effects of pH on wound healing, biofilms, and antimicrobial efficacy. Wound Repair Regen 22(2):174–186
McCluskey J, Hinds J, Husain S, Witney A, Mitchell TJ (2004) A two-component system that controls the expression of pneumococcal surface antigen A (PsaA) and regulates virulence and resistance to oxidative stress in Streptococcus pneumoniae. Molecular Microbiol 51(6):1661–1675
Metso L, Mäki M, Tissari P (2014) Efficacy of a novel PCR- and microarray-based method in diagnosis of a prosthetic joint infection. Acta Orthop 85(02):165–170
Misba L, Khan AU (2018) Enhanced photodynamic therapy using light fractionation against S. mutans biofilm: type I and type II mechanism. Future Microbiol 13:437–454
Munita JM, Arias CA (2016) Mechanisms of antibiotic resistance. Microbiol Spectr 4: VMBF–0016–2015
Muñoz-Egea MC, Garcia-Pedrazuela M, Mahillo-Fernandez I, Esteban J (2016) Effect of antibiotics and antibiofilm agents in the ultrastructure and development of biofilms developed by nonpigmented rapidly growing mycobacteria. Microb Drug Resist 22:1–6
Nithya C, Devi MG, Karutha PS (2011) A novel compound from the marine bacterium Bacillus pumilus S6–15 inhibits biofilm formation in gram-positive and gram-negative species. Biofouling 27:519–528
O’Neill J. (2016) Tackling drug-resistant infections globally: final report and recommendations. Rev Antimicrobal Resist
Parrino B, Attanzio A, Spanò V, Cascioferro S, Montalbano A, Barraja P, Tesoriere L, Diana P, Cirrincione G, Carbone A (2017) Synthesis, antitumor activity and CDK1 inhibiton of new thiazole nortopsentin analogues. Eur J Med Chem 138:371–383
Parrino B, Carbone D, Cascioferro S, Pecoraro C, Giovannetti E, Deng D, Girolamo C, Diana P (2021) 1, 2, 4-Oxadiazole topsentin analogs as staphylococcal biofilm inhibitors targeting the bacterial transpeptidase sortase A. Eur J Med Chem 209:112892
Pelgrift RY, Friedman AJ (2013) Nanotechnology as a therapeutic tool to combat microbial resistance. Adv Drug Deliv Rev 65:1803–1815
Pruden A, Pei R, Storteboom H, Carlson KH (2006) Antibiotic resistance genes asemerging contaminants: studies in northern Colorado. Environ Sci Technol 40:7445–7450
Qayyum S, Khan AU (2016) Biofabrication of broad range antibacterial and antibiofilm silver nanoparticles. IET Nanobiotechnol 10(05):349–357
Robinson TP, Bu DP, Carrique-Mas J, Fevre EM, Gilbert M, Grace D, Hay SI, Jiwakanon J, Kakkar M, Kariuki S, Laxminarayan S, Lubroth J, Magnusson U, Ngoc PT, Van Boeckel TP, Woolhouse ME (2016) Antibiotic resistance is the quintessential one health issue. Trans R Soc Trop Med Hyg 110(2016):377–380
Roca I, Akova M, Baquero F, Carlet J, Cavaleri M, Coenen S, Cohen J, Findlay D, Gyssens I, Heure OE, Kahlmeter G, Kruse H, Laxminarayan R, Liébana E, López-Cerero L, MacGowan A, Martins M, Rodríguez-Baño J, Rolain JM, Segovia C, Sigauque B, Tacconelli E, Wellington E, Vila J (2015) The global threat of antimicrobial resistance: science for intervention. New Microbes New Infect 6:22–29
Rose T, Verbeken G, Vos DD (2014) Experimental phage therapy of burn wound infection: difficult first steps. Int J Burns Trauma 4(02):66–73
Roy R, Tiwari M, Donelli G, Tiwari V (2018) Strategies for combating bacterial biofilms: a focus on anti-biofilm agents and their mechanisms of action. Virulence 9:522–554
Schillaci D, Spanò V, Parrino B, Carbone A, Montalbano A, Barraja P, Diana P, Cirrincione G, Cascioferro S (2017) Pharmaceutical approaches to target antibiotic resistance mechanisms. J Med Chem 60(20):8268–8297
Sharma D, Misba L, Khan AU (2019) Antibiotics versus biofilm: an emerging battleground in microbial communities. Antimicrob Resist Infect Control 8:76
Shoji MM, Chen AF (2020) Biofilms in periprosthetic joint infections: a review of diagnostic modalities, current treatments, and future directions. J Knee Surgery 33:119–131
Shunmugaperumal, Tamilvanan, (2010) Biofilm eradication and prevention: a pharmaceutical approach to medical device infections. ISBN 10: 0470479965 ISBN 13: 9780470479964
Singh BN, Singh HB, Singh A, Singh BR, Mishra A, Nautiyal CS (2012) Lagerst roemia species a fruit extract modulates quorum sensing-controlled virulence factor production and biofilm formation in Pseudomonas aeruginosa. Microbiol 158(2):529–538
Singh R, Ray P, Das A, Sharma M (2010) Penetration of antibiotics through Staphylococcus aureus and Staphylococcus epidermis biofilms. J Antimicrob Chemother 65:1955–1958
Song Z, Kong KF, Wu H, Maricic N, Ramalingam B, Priestap H, Schneper L, Quirke JME, Høiby N, Mathee K (2010) Panax ginseng has anti-infective activity against opportunistic pathogen Pseudomonas aeruginosa by inhibiting quorum sensing, a bacterial communication process critical for establishing infection. Phytomedicine 17:1040–1046
Speranza B, Corbo MR (2017) The impact of biofilms on food spoilage. The Microbiological Quality of Food, Woodhead Publishing Series in Food Science, Technology and Nutrition 259–282.
Srey S, Jahid IK, Ha S (2013) Biofilm formation in food industries: a food safety concern. Food Control 31:572–585
Sun F, Qu F, Ling Y, Mao P, Xia P, Chen H, Zhou D (2013) Biofilm-associated infections: antibiotic resistance and novel therapeutic strategies. Futur Microbiol 8:877–886
Tetz GV, Artemenko NK, Tetz VV (2009) Effect of DNase and antibiotics on biofilm characteristics. Antimicrob Agents Chemother 53:1204–1209
Thanner S, Drissner D, Walsh F (2016) Antimicrobial resistance in agriculture. mBio 7(2):e02227-15. https://doi.org/10.1128/mBio.02227-15
Tsang STJ, Gwynne PJ, Gallagher MP, Simpson AHRW (2018) The biofilm eradication activity of acetic acid in the management of periprosthetic joint infection. Bone Joint Res 7(08):517–523
Ventola CL (2015) The antibiotic resistance crisis: part 1: causes and threats. P T 40:277–283
Verderosa AD, Totsika M, Fairfull-Smith KE (2019) Bacterial biofilm eradication agents: a current review. Front Chem 7:824
Walters MC, Roe F, Bugnicourt A, Franklin MJ, Stewart PS (2003) Contributions of antibiotic penetration, oxygen limitation, and low metabolic activity to tolerance of Pseudomonas aeruginosa biofilms to ciprofloxacin and tobramycin. Antimicrob Agents Chemother 47(01):317–323
Watkins RR, Smith TC, Bonomo RA (2016) On the path to untreatable infections: colistin use in agriculture and the end of ‘last resort’ antibiotics. Expert Rev Antiinfect Ther 14(9):785–788
Wolfmeier H, Pletzer D, Sarah C, Mansour REW (2018) New perspectives in biofilm eradication. ACS Infect Diseas 4(2):93–106
Wood TK, Knabel SJ, Kwan BW (2013) Bacterial persister cell formation and dormancy. Appl Environ Microbiol 79(23):7116–7121
World Health Organization (2014) Global status report on noncommunicable diseases 2014. World Health Organization. No. WHO/NMH/NVI/15.1
Wuijts S, van den Berg HH, Miller J, Abebe L, Sobsey M, Andremont A, Medlicott KO, van Passel MW, de Roda Husman AM (2017) Towards a research agenda for water, sanitation and antimicrobial resistance. J Water Health 15(2):175–184
Zaidi S, Misba L, Khan AU (2017) Nano-therapeutics: a revolution in infection control in post antibiotic era. Nanomedicine 13(07):2281–2301
Zhang L, Chiang WC, Gao Q, Givskov M, Tolker-Nielsen T, Yang L, Zhang G (2012) The catabolite repression control protein Crc plays a role in the development of antimicrobial-tolerant subpopulations in Pseudomonas aeruginosa biofilms. Microbiol 158(12):3014–3019
Zhao X, Yu Z, Ding T (2020) Quorum-sensing regulation of antimicrobial resistance in bacteria. Microorgan 8(3):425
Zhu YG, Zhao Y, Li B, Huang CL, Zhang SY, Yu S, Chen YS, Zhang T, Gillings MR, Su JQ (2017) Continental-scale pollution of estuaries with antibiotic re-sistance genes. Nat Microbiol 2:16270