CaM and CML emergence in the green lineage

Trends in Plant Science - Tập 20 - Trang 483-489 - 2015
Xiaoyang Zhu1,2, Christophe Dunand1,2, Wayne Snedden3, Jean-Philippe Galaud1,2
1Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326 Castanet-Tolosan, France
2CNRS, UMR 5546, BP 42617, F-31326, Castanet-Tolosan, France
3Department of Biology, Queen's University, Kingston, Ont. K7L 3N6, Canada

Tài liệu tham khảo

Ramegowda, 2014, The interactive effects of simultaneous biotic and abiotic stresses on plants: Mechanistic understanding from drought and pathogen combination, J. Plant Physiol., 176, 47, 10.1016/j.jplph.2014.11.008 Dodd, 2010, The language of calcium signaling, Annu. Rev. Plant Biol., 61, 593, 10.1146/annurev-arplant-070109-104628 Kudla, 2010, Calcium signals: the lead currency of plant information processing, Plant Cell, 22, 541, 10.1105/tpc.109.072686 Reddy, 2011, Coping with stresses: roles of calcium- and calcium/calmodulin-regulated gene expression, Plant Cell, 23, 2010, 10.1105/tpc.111.084988 Das, 2014, Calcium/calmodulin in plant stress response and signaling, 53 Downie, 2014, Calcium signals in plant immunity: a spiky issue, New Phytol., 204, 733, 10.1111/nph.13119 McAinsh, 2009, Shaping the calcium signature, New Phytol., 181, 275, 10.1111/j.1469-8137.2008.02682.x Kursula, 2014, The many structural faces of calmodulin: a multitasking molecular jackknife, Amino Acids, 46, 2295, 10.1007/s00726-014-1795-y McCormack, 2003, Calmodulins and related potential calcium sensors of Arabidopsis, New Phytol., 159, 585, 10.1046/j.1469-8137.2003.00845.x DeFalco, 2009, Breaking the code: Ca2+ sensors in plant signalling, Biochem. J., 14, 27 Perochon, 2011, Calmodulin and calmodulin-like proteins in plant calcium signaling, Biochimie, 93, 2048, 10.1016/j.biochi.2011.07.012 Kleist, 2014, Comparative phylogenomics of the CBL-CIPK calcium-decoding network in the moss Physcomitrella, Arabidopsis, and other green lineages, Front. Plant Sci., 14, 187 Hamel, 2014, Ancient signals: comparative genomics of green plant CDPKs, Trends Plant Sci., 19, 79, 10.1016/j.tplants.2013.10.009 Bouché, 2005, Plant-specific calmodulin-binding proteins, Annu. Rev. Plant Biol., 56, 435, 10.1146/annurev.arplant.56.032604.144224 McCormack, 2005, Handling calcium signaling: Arabidopsis CaMs and CMLs, Trends Plant Sci., 10, 383, 10.1016/j.tplants.2005.07.001 Vadassery, 2012, CML42-mediated calcium signaling coordinates responses to Spodoptera herbivory and abiotic stresses in Arabidopsis, Plant Physiol., 159, 1159, 10.1104/pp.112.198150 Scholz, 2014, Mutation of the Arabidopsis calmodulin-like protein CML37 deregulates the jasmonate pathway and enhances susceptibility to herbivory, Mol. Plant, 7, 1712, 10.1093/mp/ssu102 Chiasson, 2005, Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato, Plant Mol. Biol., 58, 887, 10.1007/s11103-005-8395-x Ma, 2008, Innate immunity signaling: cytosolic Ca2+ elevation is linked to downstream nitric oxide generation through the action of calmodulin or a calmodulin-like protein, Plant Physiol., 148, 818, 10.1104/pp.108.125104 Leba, 2012, CML9, an Arabidopsis calmodulin-like protein, contributes to plant innate immunity through a flagellin-dependent signalling pathway, Plant J., 71, 976, 10.1111/j.1365-313X.2012.05045.x Cheval, 2013, Calcium/calmodulin-mediated regulation of plant immunity, Biochim. Biophys. Acta, 1833, 1766, 10.1016/j.bbamcr.2013.01.031 Yamaguchi, 2005, Vacuolar Na+/H+ antiporter cation selectivity is regulated by calmodulin from within the vacuole in a Ca2+- and pH-dependent manner, Proc. Natl. Acad. Sci. U.S.A., 102, 16107, 10.1073/pnas.0504437102 Rao, 2014, Overexpression of GmCaM4 in soybean enhances resistance to pathogens and tolerance to salt stress, Mol. Plant Pathol., 15, 145, 10.1111/mpp.12075 Magnan, 2008, Mutations in AtCML9, a calmodulin-like protein from Arabidopsis thaliana, alter plant responses to abiotic stress and abscisic acid, Plant J., 56, 575, 10.1111/j.1365-313X.2008.03622.x Tsai, 2007, Arabidopsis potential calcium sensors regulate nitric oxide levels and the transition to flowering, Plant Signal. Behav., 2, 446, 10.4161/psb.2.6.4695 Dobney, 2009, The calmodulin-related calcium sensor CML42 plays a role in trichome branching, J. Biol. Chem., 284, 31647, 10.1074/jbc.M109.056770 Wang, 2015, Arabidopsis thaliana CML25 mediates the Ca2+ regulation of K+ transmembrane trafficking during pollen germination and tube elongation, Plant Cell Environ., 10.1111/pce.12559 Won, 2009, Cis-element- and transcriptome-based screening of root hair-specific genes and their functional characterization in Arabidopsis, Plant Physiol., 150, 1459, 10.1104/pp.109.140905 Lin, 2011, Coexpression-based clustering of Arabidopsis root genes predicts functional modules in early phosphate deficiency signaling, Plant Physiol., 155, 1383, 10.1104/pp.110.166520 Bender, 2013, The Arabidopsis calmodulin-like protein, CML39, functions during early seedling establishment, Plant J., 76, 634, 10.1111/tpj.12323 Azimzadeh, 2008, Arabidopsis TONNEAU1 proteins are essential for preprophase band formation and interact with centrin, Plant Cell, 20, 2146, 10.1105/tpc.107.056812 Mikami, 2014, Structural divergence and loss of phosphoinositide-specific phospholipase C signaling components during the evolution of the green plant lineage: implications from structural characteristics of algal components, Front. Plant Sci., 5, 380, 10.3389/fpls.2014.00380 Song, 2014, Delineation of plant caleosin residues critical for functional divergence, positive selection and coevolution, BMC Evol. Biol., 9, 124, 10.1186/1471-2148-14-124 Lallement, 2014, The still mysterious roles of cysteine-containing glutathione transferases in plants, Front. Pharmacol., 20, 192 Büchel, 2015, Evolution and function of light harvesting proteins, J. Plant Physiol., 172, 62, 10.1016/j.jplph.2014.04.018 Finet, 2010, Multigene phylogeny of the green lineage reveals the origin and diversification of land plants, Curr. Biol., 21, 2217, 10.1016/j.cub.2010.11.035 Graham, 1996, Green algae to land plants: an evolutionary transition J, Plant Res., 109, 241, 10.1007/BF02344471 Weinl, 2009, The CBL-CIPK Ca(2+)-decoding signaling network: function and perspectives, New Phytol., 184, 517, 10.1111/j.1469-8137.2009.02938.x Valmonte, 2014, Calcium-dependent protein kinases in plants: evolution, expression and function, Plant Cell Physiol., 55, 551, 10.1093/pcp/pct200 Fuchs, 2011, Calmodulin and calmodulin-like proteins in Arabidopsis thaliana, Endocytobiosis Cell Res., 21, 114 Boonburapong, 2007, Genome-wide identification and analyses of the rice calmodulin and related potential calcium sensor proteins, BMC Plant Biol., 7, 1, 10.1186/1471-2229-7-4 Chinpongpanich, 2011, Biophysical characterization of calmodulin and calmodulin-like proteins from rice, Oryza sativa L, Acta Biochim. Biophys. Sin. (Shanghai), 43, 867, 10.1093/abbs/gmr081 Bender, 2013, Calmodulin-related proteins step out from the shadow of their namesake, Plant Physiol., 163, 486, 10.1104/pp.113.221069 Banks, 2009, Selaginella and 400 million years of separation, Annu. Rev. Plant Biol., 60, 223, 10.1146/annurev.arplant.59.032607.092851 Bender, 2014, The calmodulin-like protein CML43 functions as a salicylic-acid-inducible root-specific Ca(2+) sensor in Arabidopsis, Biochem. J., 457, 127, 10.1042/BJ20131080 Wang, 2008, Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis, Plant Physiol., 148, 1201, 10.1104/pp.108.126375 Chigri, 2012, The Arabidopsis calmodulin-like proteins AtCML30 and AtCML3 are targeted to mitochondria and peroxisomes, respectively, Plant Mol. Biol., 78, 211, 10.1007/s11103-011-9856-z Rodriguez-Concepcion, 1999, The prenylation status of a novel plant calmodulin directs plasma membrane or nuclear localization of the protein, EMBO J., 18, 1996, 10.1093/emboj/18.7.1996 Rodriguez-Concepcion, 2000, Carboxy-methylation of prenylated calmodulin CaM53 is required for efficient plasma membrane targeting of the protein, Plant J., 24, 775, 10.1046/j.1365-313x.2000.00924.x Dong, 2002, The subcellular localization of an unusual rice calmodulin isoform, OsCaM61, depends on its prenylation status, Plant Mol. Biol., 48, 203, 10.1023/A:1013380814919 Jamshidiha, 2013, Structural analysis of a calmodulin variant from rice: the C-terminal extension of OsCaM61 regulates its calcium binding and enzyme activation properties, J. Biol. Chem., 288, 32036, 10.1074/jbc.M113.491076 Dominguez, 2015, Calcium binding proteins and calcium signaling in prokaryotes, Cell Calcium, 57, 151, 10.1016/j.ceca.2014.12.006 Day, 2002, Analysis of EF-hand-containing proteins in Arabidopsis, Genome Biol., 3, 10.1186/gb-2002-3-10-research0056 Harmon, 2000, CDPKs: a kinase for every Ca2 signal?, Trends Plant Sci., 5, 154, 10.1016/S1360-1385(00)01577-6 Batistic, 2009, Plant calcineurin B-like proteins and their interacting protein kinases, Biochim. Biophys. Acta, 1793, 985, 10.1016/j.bbamcr.2008.10.006 Kudla, 1999, Genes for calcineurin B-like proteins in Arabidopsis are differentially regulated by stress signals, Proc. Natl. Acad. Sci. U.S.A., 96, 4718, 10.1073/pnas.96.8.4718 Boudsocq, 2010, Differential innate immune signalling via Ca(2+) sensor protein kinases, Nature, 464, 418, 10.1038/nature08794 McCourt, 1995, Green algae phylogeny, Trends Ecol. Evol., 10, 159, 10.1016/S0169-5347(00)89027-8 Abzhanov, 2006, The calmodulin pathway and evolution of elongated beak morphology in Darwin's finches, Nature, 442, 563, 10.1038/nature04843 Dent, 2015, Large-scale insertional mutagenesis of Chlamydomonas supports phylogenomic functional prediction of photosynthetic genes and analysis of classical acetate-requiring mutants, Plant J., 82, 337, 10.1111/tpj.12806 Tamura, 2013, MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0, Mol. Biol. Evol., 30, 2725, 10.1093/molbev/mst197 Cheng, 2002, Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family, Plant Physiol., 129, 469, 10.1104/pp.005645 Luan, 2002, Calmodulins and calcineurin B-like proteins calcium sensors for specific signal response coupling in plants, Plant Cell, 14, S389, 10.1105/tpc.001115 Luan, 2009, The CBL–CIPK network in plant calcium signaling, Trends Plant Sci., 14, 37, 10.1016/j.tplants.2008.10.005 Zhang, 2008, Calcineurin B-Like family in Populus: comparative genome analysis and expression pattern under cold, drought and salt stress treatment, Plant Growth Regul., 56, 129, 10.1007/s10725-008-9293-4 Asano, 2005, Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: comprehensive analysis of the CDPKs gene family in rice, Plant Cell Physiol., 46, 356, 10.1093/pcp/pci035 Gu, 2008, Expression analysis of the calcineurin B-like gene family in rice (Oryza sativa L.) under environmental stresses, Gene, 415, 1, 10.1016/j.gene.2008.02.011