Biofilm formation and genetic diversity of Salmonella isolates recovered from clinical, food, poultry and environmental sources

Infection, Genetics and Evolution - Tập 36 - Trang 424-433 - 2015
Amruta Nair1, Deepak B. Rawool1, Swapnil Doijad2, Krupali Poharkar3, Vysakh Mohan1, Sukhadeo B. Barbuddhe4, Rahul Kolhe5, Nitin V. Kurkure3, Ashok Kumar1, S.V.S. Malik1, T. Balasaravanan6
1Division of Veterinary Public Health, Indian Veterinary Research Institute, Izatnagar 243122, India
2Institute of Medical Microbiology, Biomedizinisches Forschungszentrum Seltersberg, Schubertstr. 81, Giessen 35392, Germany
3Nagpur Veterinary College, Maharashtra Animal and Fishery Sciences University, Nagpur 440006, India
4National Institute of Biotic Stress Management, Raipur 493225, India
5K.N.P. College of Veterinary Science, Shirval 412801, India
6Nehru Arts and Science College, Bharathiar University, Coimbatore 641001, India

Tài liệu tham khảo

Acheson, 2001, Nontyphoidal salmonellosis, Clin. Infect. Dis., 32, 263, 10.1086/318457 Agarwal, 2011, Optimization of microtitre plate assay for the testing of biofilm formation ability in different Salmonella, Int. Food Res. J., 18, 1493 Ajayi, 2011, Antibiotic susceptibility Salmonella Typhi and Klebsiella pneumonia from poultry and local birds in Ado-Ekiti State, Nigeria, Ann. Biol. Res., 2, 431 Albufera, 2009, Molecular characterization of Salmonella isolates by REP-PCR and RAPD analysis, Infect. Genet. Evol., 9, 322, 10.1016/j.meegid.2007.12.003 Ammari, 2009, Characterization of Salmonella Enteritidis isolated from foods and patients in northern Morocco, J. Infect. Dev. Countries, 3, 695 Andrews, 2014 Bhowmick, 2012, Serotyping and molecular characterization for study of genetic diversity among seafood associated non typhoidal Salmonella serovars, Indian J. Med. Res., 135, 371 Bohaychuk, 2005, Evaluation of detection methods for screening meat and poultry products for the presence of foodborne pathogens, J. Food Prot., 68, 2637, 10.4315/0362-028X-68.12.2637 Boxrud, 2007, Comparison of multiple-locus variable-number tandem repeat analysis, pulsedfield gel electrophoresis, and phage typing for subtype analysis of Salmonella enterica serotype Enteritidis, J. Clin. Microbiol., 45, 536, 10.1128/JCM.01595-06 Bridier, 2010, The biofilm architecture of sixty opportunistic pathogens deciphered using a high throughput CLSM method, J. Microbiol. Methods, 82, 64, 10.1016/j.mimet.2010.04.006 Campioni, 2012, Genetic diversity, virulence genes and antimicrobial resistance of Salmonella Enteritidis isolated from food and humans over a 24-year period in Brazil, Food Microbiol., 32, 254, 10.1016/j.fm.2012.06.008 Castelijn, 2012, Diversity in biofilm formation and production of curli fimbriae and cellulose of Salmonella Typhimurium strains of different origin in high and low nutrient medium, Biofouling, 28, 51, 10.1080/08927014.2011.648927 CDC CDC Charlebois, 2014, Biofilm formation of Clostridium perfringens and its exposure to low-dose antimicrobials, Front. Microbiol., 5 De Cesare, 2001, Automated ribotyping and random amplified polymorphic DNA analysis for molecular typing of Salmonella Enteritidis and Salmonella Typhimurium strains isolated in Italy, J. Appl. Microbiol., 91, 780, 10.1046/j.1365-2672.2001.01441.x De Freitas, 2010, PCR multiplex for detection of Salmonella Enteritidis, Typhi and Typhimurium and occurrence in poultry meat, Int. J. Food Microbiol., 139, 15, 10.1016/j.ijfoodmicro.2010.02.007 Diez-Garcia, 2012, Influence of serotype on the growth kinetics and the ability to form biofilms of Salmonella isolates from poultry, Food Microbiol., 31, 173, 10.1016/j.fm.2012.03.012 El-Sebay, 2012, Genotyping of some local isolates of genus Salmonella using RAPD-PCR, World Appl. Sci. J., 17, 1377 Fakhr, 2005, Multilocus sequence typing lacks the discriminatory ability of pulsed-field gel electrophoresis for typing Salmonella enterica serovar Typhimurium, J. Clin. Microbiol., 43, 2215, 10.1128/JCM.43.5.2215-2219.2005 Fendri, 2013, Genetic diversity of food-isolated Salmonella strains through pulsed field gel electrophoresis (PFGE) and enterobacterial repetitive intergenic consensus (ERIC-PCR), PLoS One, 8, e81315, 10.1371/journal.pone.0081315 Foley, 2006, Comparison of subtyping methods for differentiating Salmonella enterica serovar Typhimurium isolates obtained from food animal sources, J. Clin. Microbiol., 44, 3569, 10.1128/JCM.00745-06 Fux, 2005, Survival strategies of infectious biofilms, Trends Microbiol., 13, 34, 10.1016/j.tim.2004.11.010 Ghasemmahdi, 2015, Antibiotic resistance pattern and biofilm formation ability of clinically isolates of Salmonella enteric serotype Typhimurium, Int. J. Enteric Pathog., 3, e27372, 10.17795/ijep27372 Goeres, 2005, Statistical assessment of a laboratory method for growing biofilms, Microbiol, 151, 757, 10.1099/mic.0.27709-0 Goldman, 2009, The family enterobacteriaceae, 220 Grantcharova, 2010, Bistable expression of CsgD in biofilm development of Salmonella enteric serovar Typhimurium, J. Bacteriol., 192, 456, 10.1128/JB.01826-08 Guerra, 2000, Application of PFGE performed with XbaI to an epidemiological and phylogenetic study of Salmonella serotype Typhimurium. Relations between genetic types and phage types, New Microbiol., 23, 11 Habimana, 2010, Enhanced surface colonization by Escherichia coli O157: H7 in biofilms formed by an Acinetobacter calcoaceticus isolate from meat-processing environments, Appl. Environ. Microbiol., 76, 4557, 10.1128/AEM.02707-09 Jeoffreys, 2001, Practical evaluation of molecular subtyping and phage typing in outbreaks of infection due to Salmonella enterica serotype Typhimurium, Pathology, 33, 66, 10.1080/00313020124110 Joseph, 2001, Biofilm formation by Salmonella spp. on food contact surfaces and their sensitivity to sanitizers, Int. J. Food Microbiol., 64, 367, 10.1016/S0168-1605(00)00466-9 Kagambèga, 2013, Prevalence and characterization of Salmonella enterica from the feces of cattle, poultry, swine and hedgehogs in Burkina Faso and their comparison to human Salmonella isolates, BMC Microbiol., 13, 253, 10.1186/1471-2180-13-253 Kalaivani Kalai Chelvam, 2014, Variations in motility and biofilm formation of Salmonella enterica serovar Typhi, Gut Pathog., 6, 2, 10.1186/1757-4749-6-2 Kim, 2007, Biofilm formation by multidrug-resistant Salmonella enterica serotype Typhimurium phage type DT104 and other pathogens, J. Food Prot., 70, 22, 10.4315/0362-028X-70.1.22 Legendre, 2011, Evaluation of antibacterial activity against Salmonella Enteritidis, J. Microbiol., 49, 349, 10.1007/s12275-011-0162-x Lindstedt, 2000, Fluorescent amplified-fragment length polymorphism genotyping of Salmonella enterica subsp. enterica serovars and comparison with pulsed-field gel electrophoresis typing, J. Clin. Microbiol., 38, 1623, 10.1128/JCM.38.4.1623-1627.2000 Majtan, 2008, In vitro effect of subinhibitory concentrations of antibiotics on biofilm formation by clinical strains of Salmonella enterica serovar Typhimurium isolated in Slovakia, J. Appl. Microbiol., 104, 1294, 10.1111/j.1365-2672.2007.03653.x Mangalappalli-Illathu, 2008, Differential adaptive response and survival of Salmonella enterica serovar Enteritidis planktonic and biofilm cells exposed to benzalkonium chloride, Antimicrob. Agents Chemother., 52, 3669, 10.1128/AAC.00073-08 Monds, 2009, The developmental model of microbial biofilms: ten years of a paradigm up for review, Trends Microbiol., 17, 73, 10.1016/j.tim.2008.11.001 Morshed, 2010, Drug resistance, plasmid profile and random amplified polymorphic DNA analysis of Iranian isolates of Salmonella Enteritidis, New Microbiol., 33, 47 Naeem, 2014, Detection of swarming and biofilm formation ability of Salmonella typhimurium isolated from landfills waste, Curr. Res. Microbiol. Biotechnol., 2, 444 Nath, 2010, ERIC PCR and RAPD based fingerprinting of Salmonella Typhi strains isolated over a period of two decades, Infect. Genet. Evol., 10, 530, 10.1016/j.meegid.2010.02.004 Newton, 2013, Typhoid & Paratyphoid Fever, 356 (9228), 319 Oliveira, 2003, Evaluation of selective and non-selective enrichment PCR procedures for Salmonella detection, Lett. Appl. Microbiol., 36, 217, 10.1046/j.1472-765X.2003.01294.x Papavasileiou, 2010, Comparative antimicrobial susceptibility of biofilm versus planktonic forms of Salmonella enterica strains isolated from children with gastroenteritis, Eur. J. Clin. Microbiol. Infect. Dis., 29, 1401, 10.1007/s10096-010-1015-y Patel, 2010, Differences in attachment of Salmonella enterica serovars to cabbage and lettuce leaves, Int. J. Food Microbiol., 139, 41, 10.1016/j.ijfoodmicro.2010.02.005 Pui, 2011, Biofilm formation by Salmonella Typhi and Salmonella Typhimurium on plastic cutting board and its transfer to dragon fruit, Int. Food Res. J., 18, 31 Ribot, 2006, Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157: H7, Salmonella, and Shigella for PulseNet, Foodborne Pathog. Dis., 3, 59, 10.1089/fpd.2006.3.59 Rivoal, 2009, Use of pulsed-field gel electrophoresis to characterize the heterogeneity and clonality of Salmonella serotype Enteritidis, Typhimurium and Infantis isolates obtained from whole liquid eggs, Int. J. Food Microbiol., 129, 180, 10.1016/j.ijfoodmicro.2008.11.021 Rodrigues, 2011, Listeria monocytogenes and Salmonella enterica Enteritidis biofilms susceptibility to different disinfectants and stress-response and virulence gene expression of surviving cells, Microb. Drug Resist., 17, 181, 10.1089/mdr.2010.0183 Seixas, 2014, Effect of Simulated Gastrointestinal Conditions on Biofilm Formation by Salmonella 1, 4,[5], 12: i:-, Sci. World J., 10.1155/2014/153956 Shabarinath, 2007, Detection and characterization of Salmonella associated with tropical seafood, Int. J. Food Microbiol., 114, 227, 10.1016/j.ijfoodmicro.2006.09.012 Sheffield, 2012, Invasion and Survival of Salmonella in the Environment: The Role of Biofilms, Salmonella—A Diversified Superbug Solomon, 2005, Biofilm formation, cellulose production, and curli biosynthesis by Salmonella originating from produce, animal, and clinical sources, J. Food Prot., 5, 906, 10.4315/0362-028X-68.5.906 Son, 2002, Molecular characterization of Vibrio cholera O1 outbreak strains in Miri, Sarawak (Malaysia), Acta Trop., 83, 169, 10.1016/S0001-706X(02)00110-9 Steenackers, 2012, Salmonella biofilms: An overview on occurrence, structure, regulation and eradication, Food Res. Int., 45, 502, 10.1016/j.foodres.2011.01.038 Stepanović, 2001, Influence of dynamic conditions on biofilm formation by staphylococci, Eur. J. Clin. Microbiol. Infect. Dis., 20, 502, 10.1007/s100960100534 Stepanovic, 2003, Influence of the incubation temperature, atmosphere and dynamic conditions on biofilm formation by Salmonella spp, Food Microbiol., 20, 339, 10.1016/S0740-0020(02)00123-5 Stepanovic, 2004, Biofilm formation by Salmonella spp. and Listeria monocytogenes on plastic surface, Lett. Appl. Microbiol., 38, 428, 10.1111/j.1472-765X.2004.01513.x Torpdahl, 2005, Genotypic characterization of Salmonella by multilocus sequence typing, pulsed-field gel electrophoresis and amplified fragment length polymorphism, J. Microbiol. Methods, 63, 173, 10.1016/j.mimet.2005.03.006 Tsen, 2002, Pulse field electrophoresis for animal Salmonella enterica serovar Typhimurium isolates in Taiwan, Vet. Microbiol., 87, 73, 10.1016/S0378-1135(02)00020-2 Turki, 2014, Comparison of five molecular subtyping methods for differentiation of Salmonella Kentucky isolates in Tunisia, World J. Microbiol. Biotechnol., 30, 87, 10.1007/s11274-013-1414-1 Van Belkum, 2007, Guidelines for the validation and application of typing methods for use in bacterial epidemiology, Clin. Microbiol. Infect., 13, 1, 10.1111/j.1469-0691.2007.01786.x Versalovic, 1991, Distribution of repetitive DNA sequences in eubacteria and application to fingerprint of bacterial genomes, Nucleic Acids Res., 24, 6823, 10.1093/nar/19.24.6823 Vestby, 2009, Biofilm forming abilities of Salmonella are correlated with persistence in fish meal- and feed factories, BMC Vet. Res., 5, 20, 10.1186/1746-6148-5-20 Wang, 2013, Biofilm formation of meat-borne Salmonella enterica and inhibition by the cell-free supernatant from Pseudomonas aeruginosa, Food Control, 32, 650, 10.1016/j.foodcont.2013.01.047 Woo, 2006, Genetic diversity of multi-resistant Salmonella enterica serotype Typhimurium isolates from animals and humans, J. Microbiol. (Seoul Korea), 44, 106 Zulkifli, 2009, Random amplified polymorphic DNA–PCR and ERIC PCR analysis on Vibrio parahaemolyticus isolated from cocles in Padang, Indonesia, Int. Food Res. J., 16, 141