Biodegradation of crude oil and dispersants in deep seawater from the Gulf of Mexico: Insights from ultra-high resolution mass spectrometry

Aeppli, 2012, Oil weathering after the Deepwater Horizon disaster led to the formation of oxygenated residues, Environ. Sci. Technol., 46, 8799, 10.1021/es3015138 Almeda, 2014, Toxicity of dispersant Corexit 9500A and crude oil to marine microzooplankton, Ecotoxicol. Environ. Saf., 106, 76, 10.1016/j.ecoenv.2014.04.028 Atlas, 1972, Degradation and mineralization of petroleum in sea water: limitation by nitrogen and phosphorous, Biotechnol. Bioeng., 14, 309, 10.1002/bit.260140304 Campo, 2013, Biodegradability of Corexit 9500 and dispersed South Louisiana crude oil at 5 and 25°C, Environ. Sci. Technol., 47, 1960, 10.1021/es303881h Chapelle, 1999, Bioremediation of petroleum hydrocarbon-contaminated ground water: the perspectives of history and hydrology, Ground Water, 37, 122, 10.1111/j.1745-6584.1999.tb00965.x Chapman, 1997, Carbon substrate mineralization and sulphur limitation, Soil Biol. Biochem., 29, 115, 10.1016/S0038-0717(96)00302-1 Corilo, 2013, Oil spill source identification by principal component analysis of electrospray ionization Fourier transform ion cyclotron resonance mass spectra, Anal. Chem., 85, 9064, 10.1021/ac401604u Dittmar, 2008, A simple and efficient method for the solid-phase extraction of dissolved organic matter (SPE–DOM) from seawater, Limnol. Oceanogr. – Methods, 6, 230, 10.4319/lom.2008.6.230 Flerus, 2011, Molecular level investigation of reactions between dissolved organic matter and extraction solvents using FT-ICR MS, Mar. Chem., 124, 100, 10.1016/j.marchem.2010.12.006 Foght, 1982, Effect of the dispersant Corexit 9527 on the microbial degradation of Prudhoe Bay oil, Can. J. Microbiol., 28, 117, 10.1139/m82-012 Fontanals, 2005, New hydrophilic materials for solid-phase extraction, Trends Anal. Chem., 24, 394, 10.1016/j.trac.2005.01.012 Garrett, 1998, Photooxidation of crude oils, Environ. Sci. Technol., 32, 3719, 10.1021/es980201r George-Ares, 2000, Aquatic toxicity of two Corexit® dispersants, Chemosphere, 40, 897, 10.1016/S0045-6535(99)00498-1 Graham, B., Reilly, W.K., Beinecke, F., Boesch, D.F., Garcia, T.D., Murray, C.A., Ulmer, F., 2011. National commission on the BP Deepwater Horizon oil spill and offshore drilling: the use of surface and subsea dispersants during the BP Deepwater Horizon oil spill. Staff working paper. Updated January 11, p. 4. Hall, 2013, Oxygenated weathering products of Deepwater Horizon oil come from surprising precursors, Mar. Pollut. Bull., 75, 140, 10.1016/j.marpolbul.2013.07.048 Jannasch, 1982, Deep-sea bacteria: isolation in the absence of decompression, Science, 216, 1315, 10.1126/science.216.4552.1315 Kido Soule, 2010, Impact of instrument and experiment parameters on reproducibility of ultrahigh resolution ESI FT-ICR mass spectra of natural organic matter, Org. Geochem., 41, 725, 10.1016/j.orggeochem.2010.05.017 Kleindienst, 2015, Using dispersants after oil spills: impacts on the composition and activity of microbial communities., Nat. Rev. Microbiol., 13, 388, 10.1038/nrmicro3452 Kleindienst, 2015, Chemical dispersants can suppress the activity of natural oil-degrading microorganisms, Proc. Natl. Acad. Sci., 112, 14900, 10.1073/pnas.1507380112 Koch, 2006, From mass to structure: an aromaticity index for high-resolution mass data of natural organic matter, Rapid Commun. Mass Spectrom., 20, 926, 10.1002/rcm.2386 Koch, 2007, Fundamentals of molecular formula assignment to ultrahigh resolution mass data of natural organic matter, Anal. Chem., 79, 1758, 10.1021/ac061949s Kujawinski, 2011, Fate of dispersants associated with the Deepwater Horizon oil spill, Environ. Sci. Technol., 45, 1298, 10.1021/es103838p Lemkau, 2014, Molecular evidence of heavy-oil weathering following the M/V Cosco Busan spill: insights from Fourier transform ion cyclotron resonance mass spectrometry, Environ. Sci. Technol., 48, 3760, 10.1021/es403787u Lewis, 2013, Toxicities of oils, dispersants and dispersed oils to algae and aquatic plants: Review and database value to resource sustainability, Environ. Pollut., 180, 345, 10.1016/j.envpol.2013.05.001 Lindstrom, 2002, Biodegradation of petroleum hydrocarbons at low temperature in the presence of the dispersant Corexit 9500, Mar. Pollut. Bull., 44, 739, 10.1016/S0025-326X(02)00050-4 Lu, 2012, Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume, ISME J., 6, 451, 10.1038/ismej.2011.91 Marshall, 2003, Petroleomics: the next grand challenge for chemical analysis, Acc. Chem. Res., 37, 53, 10.1021/ar020177t Marshall, 2008, Petroleomics: chemistry of the underworld, Proc. Natl. Acad. Sci. USA, 105, 18090, 10.1073/pnas.0805069105 Mathew, 2012, Dioctyl sulfosuccinate analysis in near-shore Gulf of Mexico water by direct-injection liquid chromatography–tandem mass spectrometry, J. Chromatogr. A, 1231, 46, 10.1016/j.chroma.2012.01.088 McKenna, 2013, Expansion of the analytical window for oil spill characterization by ultrahigh resolution mass spectrometry: beyond gas chromatography, Environ. Sci. Technol., 47, 7530, 10.1021/es305284t McNutt, 2012, Review of flow rate estimates of the Deepwater Horizon oil spill, Proc. Natl. Acad. Sci. USA, 109, 20260, 10.1073/pnas.1112139108 Methé, 2005, The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses, Proc. Natl. Acad. Sci. USA, 102, 10913, 10.1073/pnas.0504766102 National Research Council, 2005 National Response Team, 2011. On Scene Coordinator report, Deepwater Horizon oil spill, submitted to the National Response Team, September 2011. United States Coast Guard. Oksanen, J., Blanchet, F.G., Kindt, R., Legendre, P., Minchin, P.R., O'Hara, R.B., Simpson, G.L., Solymos, P., Stevens, M.H.H., Wagner, H., 2013. Vegan: Community Ecology Package. R package version 2.0-10. http://CRAN.R-project.org/package=vegan. Osterholz, 2014, Molecular evidence for rapid dissolved organic matter turnover in Arctic fjords, Mar. Chem., 160, 1, 10.1016/j.marchem.2014.01.002 Parkes, 2009, Culturable prokaryotic diversity of deep, gas hydrate sediments: first use of a continuous high-pressure, anaerobic, enrichment and isolation system for subseafloor sediments (DeepIsoBUG), Environ. Microbiol., 11, 3140, 10.1111/j.1462-2920.2009.02018.x Place, 2010, A role for analytical chemistry in advancing our understanding of the occurrence, fate, and effects of Corexit oil dispersants, Environ. Sci. Technol., 44, 6016, 10.1021/es102319w Place B.J., Perkins M.J., Sinclair E., Barsamian A.L., Blakemore P.R., Field J.A., 2016. Trace analysis of surfactants in Corexit oil dispersant formulations and seawater, Deep-Sea Res. II, 129, 273–281. 10.1016/j.dsr2.2014.01.015 R Core Team, 2014 Ramachandran, 2004, Oil dispersant increases PAH uptake by fish exposed to crude oil, Ecotoxicol. Environ. Saf., 59, 300, 10.1016/j.ecoenv.2003.08.018 Ramette, 2007, Multivariate analyses in microbial ecology, FEMS Microbiol. Ecol., 62, 142, 10.1111/j.1574-6941.2007.00375.x Ramirez, 2013, High sensitivity liquid chromatography tandem mass spectrometric methods for the analysis of dioctyl sulfosuccinate in different stages of an oil spill response monitoring effort, Anal. Bioanal. Chem., 405, 4167, 10.1007/s00216-013-6841-1 Rivers, 2013, Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill, ISME J., 7, 2315, 10.1038/ismej.2013.129 Röling, 2002, Robust hydrocarbon degradation and dynamics of bacterial communities during nutrient-enhanced oil spill bioremediation, Appl. Environ. Microbiol., 68, 5537, 10.1128/AEM.68.11.5537-5548.2002 Ruddy, 2014, Targeted petroleomics: analytical investigation of Macondo well oil oxidation products from Pensacola Beach, Energy Fuels, 28, 4043, 10.1021/ef500427n Schwedt, 2015, Substrate use of Pseudovibrio sp. growing in ultra-oligotrophic seawater, PLoS ONE, 10, e0121675, 10.1371/journal.pone.0121675 Seidel, 2014, Biogeochemistry of dissolved organic matter in an anoxic intertidal creek bank, Geochim. Cosmochim. Acta, 140, 418, 10.1016/j.gca.2014.05.038 ter Braak, 1985, Correspondence analysis of incidence and abundance data: properties in terms of a unimodal response model, Biometrics, 41, 859, 10.2307/2530959 White, 2014, Long-term persistence of dispersants following the Deepwater Horizon oil spill, Environ. Sci. Technol., 1, 295, 10.1021/ez500168r