Phân tích dữ liệu lớn về các tương tác chức năng của não người dựa trên fMRI

Bullmore E, Sporns O (2009) Complex brain networks: graph theoretical analysis of structural and functional systems. Nat Rev Neurosci 10:186–198 Smith SM, Jenkinson M, Woolrich MW et al (2004) Advances in functional and structural MR image analysis and implementation as FSL. NeuroImage 23:S208–S219 Sporns O, Chialvo DR, Kaiser M et al (2004) Organization, development and function of complex brain networks. Trends Cogn Sci 8:418–425 Supekar K, Uddin LQ, Prater K et al (2010) Development of functional and structural connectivity within the default mode network in young children. NeuroImage 52:290–301 Power JD, Cohen AL, Nelson SM et al (2011) Functional network organization of the human brain. Neuron 72:665–678 Zatorre RJ, Fields RD, Johansen-Berg H (2012) Plasticity in gray and white: neuroimaging changes in brain structure during learning. Nat Neurosci 15:528–536 Turk-Browne NB (2013) Functional interactions as big data in the human brain. Science 342:580–584 Ogawa S, Lee TM, Kay AR et al (1990) Brain magnetic resonance imaging with contrast dependent on blood oxygenation. Proc Natl Acad Sci USA 87:9868–9872 Moeller S, Yacoub E, Olman CA et al (2010) Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI. Magnet Reson Med 63:1144–1153 Feinberg DA, Yacoub E (2012) The rapid development of high speed, resolution and precision in fMRI. NeuroImage 62:720–725 Finney EM, Fine I, Dobkins KR (2001) Visual stimuli activate auditory cortex in the deaf. Nat Neurosci 4:1171–1173 Belin P, Zatorre RJ, Lafaille P et al (2000) Voice-selective areas in human auditory cortex. Nature 403:309–312 Mechsner F, Kerzel D, Knoblich G et al (2001) Perceptual basis of bimanual coordination. Nature 414:69–73 Phillips ML, Young AW, Senior C et al (1997) A specific neural substrate for perceiving facial expressions of disgust. Nature 389:495–498 Lacourse MG, Orr EL, Cramer SC et al (2005) Brain activation during execution and motor imagery of novel and skilled sequential hand movements. NeuroImage 27:505–519 Holland SK, Plante E, Weber Byars A et al (2001) Normal fMRI brain activation patterns in children performing a verb generation task. NeuroImage 14:837–843 Phan KL, Wager T, Taylor SF et al (2002) Functional neuroanatomy of emotion: a meta-analysis of emotion activation studies in PET and fMRI. NeuroImage 16:331–348 Johnson SC, Saykin AJ, Flashman LA et al (2001) Brain activation on fMRI and verbal memory ability: functional neuroanatomic correlates of CVLT performance. J Int Neuropsych Soc 7:55–62 Kanwisher N (2010) Functional specificity in the human brain: a window into the functional architecture of the mind. Proc Natl Acad Sci USA 107:11163–11170 Haxby JV, Gobbini MI, Furey ML et al (2001) Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 293:2425–2430 Zhang H, Xu L, Wang S et al (2011) Behavioral improvements and brain functional alterations by motor imagery training. Brain Res 1407:38–46 Andersen AH, Gash DM, Avison MJ (1999) Principal component analysis of the dynamic response measured by fMRI: a generalized linear systems framework. Magn Reson Imaging 17:795–815 van de Ven VG, Formisano E, Prvulovic D et al (2004) Functional connectivity as revealed by spatial independent component analysis of fMRI measurements during rest. Hum Brain Mapp 22:165–178 Lazar N (2008) The statistical analysis of functional MRI data. Springer, Berlin Hu D, Yan L, Liu Y et al (2005) Unified SPM-ICA for fMRI analysis. NeuroImage 25:746–755 Bookheimer S (2002) Functional MRI of language: new approaches to understanding the cortical organization of semantic processing. Annu Rev Neurosci 25:151–188 Wu X, Lu J, Chen K et al (2009) Multiple neural networks supporting a semantic task: an fMRI study using independent component analysis. NeuroImage 45:1347–1358 Vaadia E, Haalman I, Abeles M et al (1995) Dynamics of neuronal interactions in monkey cortex in relation to behavioural events. Nature 373:515–518 Cohen AL, Fair DA, Dosenbach NU et al (2008) Defining functional areas in individual human brains using resting functional connectivity MRI. NeuroImage 41:45–57 Cauda F, D’Agata F, Sacco K et al (2011) Functional connectivity of the insula in the resting brain. NeuroImage 55:8–23 Gusnard DA, Akbudak E, Shulman GL et al (2001) Medial prefrontal cortex and self-referential mental activity: relation to a default mode of brain function. Proc Natl Acad Sci USA 98:4259–4264 Shulman GL, Fiez JA, Corbetta M et al (1997) Common blood flow changes across visual tasks: II. Decreases in cerebral cortex. J Cogn Neurosci 9:648–663 Mckiernan KA, Kaufman JN, Kucera-Thompson J et al (2003) A parametric manipulation of factors affecting task-induced deactivation in functional neuroimaging. J Cogn Neurosci 15:394–408 Mazoyer B, Zago L, Mellet E et al (2001) Cortical networks for working memory and executive functions sustain the conscious resting state in man. Brain Res Bull 54:287–298 Maddock RJ (1999) The retrosplenial cortex and emotion: new insights from functional neuroimaging of the human brain. Trends Neurosci 22:310–316 Shannon BJ, Buckner RL (2004) Functional-anatomic correlates of memory retrieval that suggest nontraditional processing roles for multiple distinct regions within posterior parietal cortex. J Neurosci 24:10084–10092 Fox MD, Snyder AZ, Vincent JL et al (2005) The human brain is intrinsically organized into dynamic, anticorrelated functional networks. Proc Natl Acad Sci USA 102:9673–9678 Smith SM (2012) The future of FMRI connectivity. NeuroImage 62:1257–1266 Zeng L, Wang D, Fox MD et al (2014) Neurobiological basis of head motion in brain imaging. Proc Natl Acad Sci USA 111:6058–6062 Zheng X, Rajapakse JC (2006) Learning functional structure from fMR images. NeuroImage 31:1601–1613 Goebel R, Roebroeck A, Kim D et al (2003) Investigating directed cortical interactions in time-resolved fMRI data using vector autoregressive modeling and Granger causality mapping. Magn Reson Imaging 21:1251–1261 Mclntosh AR, Gonzalez Lima F (1994) Structural equation modeling and its application to network analysis in functional brain imaging. Hum Brain Mapp 2:2–22 Friston KJ, Harrison L, Penny W (2003) Dynamic causal modelling. NeuroImage 19:1273–1302 Miao X, Wu X, Li R et al (2011) Altered connectivity pattern of hubs in default-mode network with Alzheimer’s disease: an Granger causality modeling approach. PLoS One 6:e25546 Wu X, Li R, Fleisher AS et al (2011) Altered default mode network connectivity in Alzheimer’s disease—a resting functional MRI and Bayesian network study. Hum Brain Mapp 32:1868–1881 Li R, Yu J, Zhang S et al (2013) Bayesian network analysis reveals alterations to default mode network connectivity in individuals at risk for Alzheimer’s disease. PLoS One 8:e82104 Li R, Chen K, Fleisher AS et al (2011) Large-scale directional connections among multi resting-state neural networks in human brain: a functional MRI and Bayesian network modeling study. NeuroImage 56:1035–1042 Murphy KP (2002) Dynamic bayesian networks: representation, inference and learning. University of California, Berkeley Cox RW, Jesmanowicz A, Hyde JS (1995) Real-Time functional magnetic resonance imaging. Magnet Reson Med 33:230–236 Ma X, Zhang H, Zhao X et al (2012) Semi-blind independent component analysis of fMRI based on real-time fMRI system. IEEE Trans Neural Syst Rehabil Eng 21:416–426 Guo H, Hsu W (2002). A survey of algorithms for real-time Bayesian network inference. AAAI/KDD/UAI02 Joint Workshop on Real-Time Decision Support and Diagnosis Systems. Edmonton, Canada Rajapakse JC, Zhou J (2007) Learning effective brain connectivity with dynamic Bayesian networks. NeuroImage 37:749–760 Wu X, Wen X, Li J et al (2014) A new dynamic Bayesian network approach for determining effective connectivity from fMRI data. Neural Comput Appl 24:91–97 Caria A, Sitaram R, Birbaumer N (2012) Real-Time fMRI a tool for local brain regulation. Neurosci 18:487–501 Zhang G, Yao L, Zhang H et al (2013) Improved working memory performance through Self-Regulation of dorsal lateral prefrontal cortex activation using Real-Time fMRI. PLoS One 8:e73735 Esposito F, Seifritz E, Formisano E et al (2003) Real-time independent component analysis of fMRI time-series. NeuroImage 20:2209–2224 Liu Y, Gao J, Liotti M et al (1999) Temporal dissociation of parallel processing in the human subcortical outputs. Nature 400:364–367 Büchel C, Friston K (2000) Assessing interactions among neuronal systems using functional neuroimaging. Neural Netw 13:871–882 Xu L, Zhang H, Hui M et al (2013) Motor execution and motor imagery: a comparison of functional connectivity patterns based on graph theory. Neuroscience 261:184–194 Zhang H, Xu L, Zhang R et al (2012) Parallel alterations of functional connectivity during execution and imagination after motor imagery learning. PLoS One 7:e36052 Buckner RL, Sepulcre J, Talukdar T et al (2009) Cortical hubs revealed by intrinsic functional connectivity: mapping, assessment of stability, and relation to Alzheimer’s disease. J Neurosci 29:1860–1873 Sepulcre J, Liu H, Talukdar T et al (2010) The organization of local and distant functional connectivity in the human brain. PLoS Comput Biol 6:e1000808 Tomasi D, Volkow ND (2010) Functional connectivity density mapping. Proc Natl Acad Sci USA 107:9885–9890 Lohmann G, Margulies DS, Horstmann A et al (2010) Eigenvector centrality mapping for analyzing connectivity patterns in fMRI data of the human brain. PLoS One 5:e10232 Giedd JN (2004) Structural magnetic resonance imaging of the adolescent brain. Ann Ny Acad Sci 1021:77–85 Mori S, Zhang J (2006) Principles of diffusion tensor imaging and its applications to basic neuroscience research. Neuron 51:527–539 Rohren EM, Turkington TG, Coleman RE (2004) Clinical applications of PET in oncology 1. Radiology 231:305–332 Sacher J, Neumann J, Fünfstück T et al (2012) Mapping the depressed brain: a meta-analysis of structural and functional alterations in major depressive disorder. J Affect Disorders 140:142–148