Beyond QSAR: Lead Hopping to Different Structures

Wiley - Tập 28 Số 8 - Trang 797-801 - 2009
Yvonne C. Martin1,2,3, Steven W. Muchmore1,2,3
1FAX: 1.847.937.2625
2Global Pharmaceutical Research and Development, Department R4CG. Abbott Laboratories, Abbott Park IL 60064, USA
3Tel.: 1.847.937.5362

Tóm tắt

AbstractWe investigated the ability of several computer programs to detect lead hops that had been reported to result from pharmacophore searching. None of the methods identified all of these lead hops and some were not found by any program. The methods that performed the best identified different lead hops. Hence, we have deployed a lead hopping application that uses belief theory to combine the results of ROCS, Daylight, and ECFP_6 similarities.

Từ khóa


Tài liệu tham khảo

10.1021/ci060117s

Boyd D. B., Reviews in Computational Chemistry

10.1021/ci049782w

Martin Y. C., Comprehensive Medicinal Chemistry II

10.2174/1381612013397843

Martin Y. C., Comprehensive Medicinal Chemistry II

10.1021/jm980409n

10.1021/jm020155c

10.1111/j.1747-0285.2006.00341.x

10.1016/S0079-6468(02)41002-8

10.1002/cbic.200400376

10.1002/(SICI)1521-3773(19991004)38:19<2894::AID-ANIE2894>3.0.CO;2-F

10.1016/S1359-6446(02)02411-X

Daylight Theory Manual Daylight Chemical Information Inc. 2008 http://www.daylight.com/dayhtml/doc/theory/theory.thor.html

SciTegic Chemistry Components Accelrys2008 http://accelrys.com/products/datasheets/chemistry‐component‐collection.pdf

J. L. Durant B. A. Leland J. G. Nourse The Enkfil.dat and Eksfil.dat files: The Keys to Understanding MDL Keyset Technology Elsevier New York2005 http://www.mdl.com/solutions/white_papers/downloads/public/SSKeys_whitepaper.pdf

Ontochem Halle Germany.

10.1021/ci00054a008

10.1021/ci950274j

Feature Trees BiosolveIT 2008 http://www.biosolveit.de/FTrees/

AdrianaMolecular Networks Erlangen2007.

CorinaMolecular Networks Erlangen2007.

OpenEye Scientific Software Santa Fe NM.

J. Leonard Abbott Laboratories 2006.

Unity Tripos 2008 http://www.tripos.com/data/SYBYL/Unity_072505.pdf

10.1021/ci7004498

10.1021/ci700052x

10.1023/B:JCAM.0000017375.61558.ad

10.1021/ci034296e

10.1021/jm040108f