Bacterial antigens elicit T cell responses via adaptive and transitional immune recognition

Sciammas, 1994, Unique antigen recognition by a herpes virus-specific TCR-gamma delta cell, J Immunol, 152, 5392, 10.4049/jimmunol.152.11.5392 Sciammas, 1998, HSV-1 glycoprotein I-reactive TCR gamma delta cells directly recognize the peptide backbone in a conformationally dependent manner, J Immunol, 161, 5187, 10.4049/jimmunol.161.10.5187 Morita, 1995, Direct presentation of nonpeptide prenyl pyrophosphate antigens to human gamma delta T cells, Immunity, 3, 495, 10.1016/1074-7613(95)90178-7 Tanaka, 1994, Nonpeptide ligands for human gamma delta T cells, Proc Natl Acad Sci USA, 91, 8175, 10.1073/pnas.91.17.8175 Tanaka, 1995, Natural and synthetic non-peptide antigens recognized by human gamma delta T cells, Nature, 375, 155, 10.1038/375155a0 Bukowski, 1999, Human gamma delta T cells recognize alkylamines derived from microbes, edible plants, and tea: implications for innate immunity, Immunity, 11, 57, 10.1016/S1074-7613(00)80081-3 Constant, 1994, Stimulation of human gamma delta T cells by nonpeptidic mycobacterial ligands, Science, 264, 267, 10.1126/science.8146660 Hayday, 2000, gamma][delta] cells: a right time and a right place for a conserved third way of protection, Annu Rev Immunol, 18, 975, 10.1146/annurev.immunol.18.1.975 McMichael, 1979, A human thymocyte antigen defined by a hybrid myeloma monoclonal antibody, Eur J Immunol, 9, 205, 10.1002/eji.1830090307 Rosat, 1999, CD1-restricted microbial lipid antigen-specific recognition found in the CD8+ alpha beta T cell pool, J Immunol, 162, 366, 10.4049/jimmunol.162.1.366 Sieling, 2000, Evidence for human CD4+ T cells in the CD1-restricted repertoire: derivation of mycobacteria-reactive T cells from leprosy lesions, J Immunol, 164, 4790, 10.4049/jimmunol.164.9.4790 Beckman, 1994, Recognition of a lipid antigen by CD1-restricted alpha beta+ T cells, Nature, 372, 691, 10.1038/372691a0 Moody, 1997, Structural requirements for glycolipid antigen recognition by CD1b-restricted T cells, Science, 278, 283, 10.1126/science.278.5336.283 Sieling, 1995, CD1-restricted T cell recognition of microbial lipoglycan antigens, Science, 269, 227, 10.1126/science.7542404 Moody, 2000, CD1c-mediated T-cell recognition of isoprenoid glycolipids in Mycobacterium tuberculosis infection, Nature, 404, 884, 10.1038/35009119 Gumperz, 2000, Murine CD1d-restricted T cell recognition of cellular lipids, Immunity, 12, 211, 10.1016/S1074-7613(00)80174-0 Briken, 2000, Human CD1b and CD1c isoforms survey different intracellular compartments for the presentation of microbial lipid antigens, J Exp Med, 192, 281, 10.1084/jem.192.2.281 Sugita, 1999, Separate pathways for antigen presentation by CD1 molecules, Immunity, 11, 743, 10.1016/S1074-7613(00)80148-X Sugita, 2000, CD1c molecules broadly survey the endocytic system, Proc Natl Acad Sci USA, 97, 8445, 10.1073/pnas.150236797 Beatty, 2000, Trafficking and release of mycobacterial lipids from infected macrophages, Traffic, 1, 235, 10.1034/j.1600-0854.2000.010306.x Schaible, 2000, Intersection of group I CD1 molecules and mycobacteria in different intracellular compartments of dendritic cells, J Immunol, 164, 4843, 10.4049/jimmunol.164.9.4843 Neyrolles, 2001, Lipoprotein access to MHC class I presentation during infection of murine macrophages with live mycobacteria, J Immunol, 166, 447, 10.4049/jimmunol.166.1.447 Moody, 2000, CD1b-mediated T cell recognition of a glycolipid antigen generated from mycobacterial lipid and host carbohydrate during infection, J Exp Med, 192, 965, 10.1084/jem.192.7.965 Sieling, 1999, CD1 expression by dendritic cells in human leprosy lesions: correlation with effective host immunity, J Immunol, 162, 1851, 10.4049/jimmunol.162.3.1851 Lewinsohn, 2000, Mycobacterium tuberculosis-reactive CD8+ T lymphocytes: the relative contribution of classical versus non classical HLA restriction, J Immunol, 165, 925, 10.4049/jimmunol.165.2.925 Serbina, 2000, CD8+ CTL from lungs of Mycobacterium tuberculosis-infected mice express perforin in vivo and lyse infected macrophages, J Immunol, 165, 353, 10.4049/jimmunol.165.1.353 Sousa, 2000, Relative contributions of distinct MHC class I-dependent cell populations in protection to tuberculosis infection in mice, Proc Natl Acad Sci USA, 97, 4204, 10.1073/pnas.97.8.4204 Kumar, 2000, Cutting edge: CD1d deficiency impairs murine host defense against the spirochete, Borrelia burgdorferi, J Immunol, 165, 4797, 10.4049/jimmunol.165.9.4797 Braud, 1997, The human major histocompatibility complex class Ib molecule HLA-E binds signal sequence-derived peptides with primary anchor residues at positions 2 and 9, Eur J Immunol, 27, 1164, 10.1002/eji.1830270517 Lee, 1998, HLA-E surface expression depends on binding of TAP-dependent peptides derived from certain HLA class I signal sequences, J Immunol, 160, 4951, 10.4049/jimmunol.160.10.4951 Bouwer, 1997, MHC class Ib-restricted cells contribute to antilisterial immunity: evidence for Qa-1b as a key restricting element for Listeria-specific CTLs, J Immunol, 159, 2795, 10.4049/jimmunol.159.6.2795 Lo, 1999, T cell responses to Gram-negative intracellular bacterial pathogens: a role for CD8+ T cells in immunity to Salmonella infection and the involvement of MHC class Ib molecules, J Immunol, 162, 5398, 10.4049/jimmunol.162.9.5398 Lo, 2000, Molecular mimicry mediated by MHC class Ib molecules after infection with gram-negative pathogens, Nat Med, 6, 215, 10.1038/72329 Jiang, 2000, The specific regulation of immune responses by CD8+ T cells restricted by the MHC class Ib molecule, Qa-1, Annu Rev Immunol, 18, 185, 10.1146/annurev.immunol.18.1.185 Gulden, 1996, A Listeria monocytogenes pentapeptide is presented to cytolytic T lymphocytes by the pentapeptide is presented to cytolytic T lymphocytes by the H2-M3 MHC class Ib molecule, Immunity, 5, 73, 10.1016/S1074-7613(00)80311-8 Lenz, 1996, Identification of an H2-M3-restricted Listeria epitope: implications for antigen presentation by M3, Immunity, 5, 63, 10.1016/S1074-7613(00)80310-6 Princiotta, 1998, H2-M3 restricted presentation of a Listeria-derived leader peptide, J Exp Med, 187, 1711, 10.1084/jem.187.10.1711 Kerksiek, 1999, H2-M3- restricted T cells in bacterial infection: rapid primary but diminished memory responses, J Exp Med, 190, 195, 10.1084/jem.190.2.195 Seaman, 2000, MHC class Ib-restricted CTL provide protection against primary and secondary Listeria monocytogenes infection, J Immunol, 165, 5192, 10.4049/jimmunol.165.9.5192 Rolph, 2000, Partially TAP-independent protection against Listeria monocytogenes by H2-M3-restricted CD8(+) T cells, J Immunol, 165, 4575, 10.4049/jimmunol.165.8.4575 Dillon, 1999, Molecular characterization and human T-cell responses to a member of a novel Mycobacterium tuberculosis mtb39 gene family, Infect Immun, 67, 2941, 10.1128/IAI.67.6.2941-2950.1999 Dillon, 2000, Molecular and immunological characterization of Mycobacterium tuberculosis CFP-10, an immunodiagnostic antigen missing in Mycobacterium bovis BCG, J Clin Microbiol, 38, 3285, 10.1128/JCM.38.9.3285-3290.2000 Alderson, 2000, Expression cloning of an immunodominant family of Mycobacterium tuberculosis antigens using human CD4(+) T cells, J Exp Med, 191, 551, 10.1084/jem.191.3.551 Skeiky, 2000, T cell expression cloning of a Mycobacterium tuberculosis gene encoding a protective antigen associated with the early control of infection, J Immunol, 165, 7140, 10.4049/jimmunol.165.12.7140 Lewinsohn, 2001, Classically restricted human CD8(+) T lymphocytes derived from Mycobacterium tuberculosis-infected cells: definition of antigenic specificity, J Immunol, 166, 439, 10.4049/jimmunol.166.1.439 Le Doussal, 2000, Phage display of peptide/major histocompatibility complex, J Immunol Methods, 241, 147, 10.1016/S0022-1759(00)00211-8 Fling, 2001, CD8+ T cells recognize a novel inclusion membrane associated protein from the vacuolar pathogen Chlamydia trachomatis, Proc Natl Acad Sci USA, 98, 1160, 10.1073/pnas.98.3.1160 Coler, 1998, Molecular cloning and immunologic reactivity of a novel low molecular mass antigen of Mycobacterium tuberculosis, J Immunol, 161, 2356, 10.4049/jimmunol.161.5.2356 Rosenkrands, 1998, Identification and characterization of a 29-kilodalton protein from Mycobacterium tuberculosis culture filtrate recognized by mouse memory effector cells, Infect Immun, 66, 2728, 10.1128/IAI.66.6.2728-2735.1998 Weldingh, 1998, Two-dimensional electrophoresis for analysis of Mycobacterium tuberculosis culture filtrate and purification and characterization of six novel proteins, Infect Immun, 66, 3492, 10.1128/IAI.66.8.3492-3500.1998 Kizil, 1999, Identification and characterization of TspA, a major CD4(+) T-cell- and B-cell-stimulating Neisseria-specific antigen, Infect Immun, 67, 3533, 10.1128/IAI.67.7.3533-3541.1999 Mehrotra, 1999, Antigenic definition of plasma membrane proteins of Bacillus Calmette-Guerin: predominant activation of human T cells by low-molecular-mass integral proteins, Scand J Immunol, 50, 411, 10.1046/j.1365-3083.1999.00616.x Prabhakar, 1998, Identification of an immunogenic histone-like protein (HLPMt) of Mycobacterium tuberculosis, Tuber Lung Dis, 79, 43, 10.1054/tuld.1998.0004 Cookson, 1997, Identification of a natural T cell epitope presented by Salmonella-infected macrophages and recognized by T cells from orally immunized mice, J Immunol, 158, 4310, 10.4049/jimmunol.158.9.4310 Skjot, 2000, Comparative evaluation of low-molecular-mass proteins from Mycobacterium tuberculosis identifies members of the ESAT-6 family as immunodominant T-cell antigens, Infect Immun, 68, 214, 10.1128/IAI.68.1.214-220.2000 Pamer, 1994, Direct sequence identification and kinetic analysis of an MHC class I-restricted Listeria monocytogenes CTL epitope, J Immunol, 152, 686, 10.4049/jimmunol.152.2.686 Hemmer, 1999, Identification of candidate T-cell epitopes and molecular mimics in chronic Lyme disease, Nat Med, 5, 1375, 10.1038/70946 Dockrell, 2000, A postgenomic approach to identification of Mycobacterium leprae-specific peptides as T-cell reagents, Infect Immun, 68, 5846, 10.1128/IAI.68.10.5846-5855.2000 Benson, 2000, GenBank, Nucleic Acids Res, 28, 15, 10.1093/nar/28.1.15 Rammensee, 1999, SYFPEITHI: database for MHC ligands and peptide motifs, Immunogenetics, 50, 213, 10.1007/s002510050595 Brockman, 1999, A new liquid chromatography/tandem mass spectrometric approach for the identification of class I major histocompatibility complex associated peptides that eliminates the need for bioassays, Rapid Commun Mass Spectrom, 13, 1024, 10.1002/(SICI)1097-0231(19990615)13:11<1024::AID-RCM601>3.0.CO;2-3 Shen, 1998, Compartmentalization of bacterial antigens: differential effects on priming of CD8 T cells and protective immunity, Cell, 92, 535, 10.1016/S0092-8674(00)80946-0 Gavin, 1998, Major histocompatibility complex allele-specific peptide libraries and identification of T-cell mimotopes, Methods Mol Biol, 87, 235