Automatic Multifaceted Matlab Package for Analysis of Ocular Images (AMPAO)

Fercher, 2003, Optical coherence tomography-principles and applications, Rep Progr Phys, 66, 239, 10.1088/0034-4885/66/2/204 Abràmoff, 2010, Retinal imaging and image analysis, IEEE Rev Biomed Eng, 3, 169, 10.1109/RBME.2010.2084567 Hajizadeh, 2018, Introduction to optical coherence tomography, 1 Oertel, 2018, Optical coherence tomography in neuromyelitis optica spectrum disorders: potential advantages for individualized monitoring of progression and therapy, EPMA J, 9, 21, 10.1007/s13167-017-0123-5 Tian, 2016, Performance evaluation of automated segmentation software on optical coherence tomography volume data, J Biophotonics, 9, 478, 10.1002/jbio.201500239 Sonka, 2016, Quantitative analysis of retinal OCT, Med Image Anal, 33, 165, 10.1016/j.media.2016.06.001 Lee, 2016, Automated segmentability index for layer segmentation of macular SD-OCT images, Transl Vis Sci Technol, 5, 14, 10.1167/tvst.5.2.14 Teng, 2013, Caserel−an open source software for computer-aided segmentation of retinal layers in optical coherence tomography images, Zenodo, 10 Lang, 2013, Retinal layer segmentation of macular OCT images using boundary classification, Biomed Opt Express, 4, 1133, 10.1364/BOE.4.001133 Bhargava, 2014, Cross-platform comparison of retinal neuronal layers in multiple sclerosis utilizing a novel open-source optical coherence tomography automated segmentation algorithm (p2. 256), Neurology, 82 Ranguelova, 2018 Mokhtari M, Rabbani H, Mehri-Dehnavi A, Kafieh R. Exact localization of breakpoints of Retinal pigment epithelium in optical coherence tomography of optic nerve head, in engineering in medicine and biology society (EMBC), in: 2017 39th annual international conference of the IEEE, 2017, pp. 1505-8. MathWorks, MATLAB version R2016b, ed: The Mathworks Mathworks, Natick, 2016. Kafieh, 2013, Curvature correction of retinal OCTs using graph-based geometry detection, Phys Med Biol, 58, 2925, 10.1088/0031-9155/58/9/2925 Amini, 2017, Optical coherence tomography image denoising using Gaussianization transform, J Biomed Opt, 22 Kafieh, 2015, Three dimensional data-driven multi scale atomic representation of optical coherence tomography, IEEE Trans Med Imaging, 34, 1042, 10.1109/TMI.2014.2374354 Niknejad, 2015, Image restoration using Gaussian mixture models with spatially constrained patch clustering, IEEE Trans Image Process, 24, 3624, 10.1109/TIP.2015.2447836 Kafieh, 2013, Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map, Med Image Anal, 17, 907, 10.1016/j.media.2013.05.006 Mujat, 2005, Retinal nerve fiber layer thickness map determined from optical coherence tomography images, Opt Express, 13, 9480, 10.1364/OPEX.13.009480 Lederer, 2003, Analysis of macular volume in normal and glaucomatous eyes using optical coherence tomography, Am J Ophthalmol, 135, 838, 10.1016/S0002-9394(02)02277-8 ETDRSR Group, Early photocoagulation for diabetic retinopathy: ETDRS report number 9, Ophthalmology, 98 (1991) pp. 766-85.