Association analysis of polymorphisms in serotonin 1B receptor (HTR1B) gene with heroin addiction: a comparison of molecular and statistically estimated haplotypes

Barnes, 1999, A review of central 5-HT receptors and their function, Neuropharmacology, 38, 1083, 10.1016/S0028-3908(99)00010-6

Brunner, 1997, Insights into the neurobiology of impulsive behavior from serotonin receptor knockout mice, Ann NY Acad Sci, 836, 81, 10.1111/j.1749-6632.1997.tb52356.x

Saudou, 1994, Enhanced aggressive behavior in mice lacking 5-HT1B receptor, Science, 265, 1875, 10.1126/science.8091214

Zhuang, 1999, Altered emotional states in knockout mice lacking 5-HT1A or 5-HT1B receptors, Neuropsychopharmacology, 21, 52S, 10.1016/S0893-133X(99)00047-0

Malleret, 1999, 5-HT1B receptor knockout mice exhibit increased exploratory activity and enhanced spatial memory performance in the Morris water maze, J Neurosci, 19, 6157, 10.1523/JNEUROSCI.19-14-06157.1999

Rocha, 1998, Increased vulnerability to cocaine in mice lacking the serotonin-1B receptor, Nature, 393, 175, 10.1038/30259

Crabbe, 1996, Elevated alcohol consumption in null mutant mice lacking 5-HT1B serotonin receptors, Nat Genet, 14, 98, 10.1038/ng0996-98

Parsons, 1998, Serotonin1B receptor stimulation enhances cocaine reinforcement, J Neurosci, 18, 10078, 10.1523/JNEUROSCI.18-23-10078.1998

Levitan, 2001, Polymorphism of the serotonin 5HT1B receptor gene (HTR1B) associated with minimum lifetime body mass index in women with bulimia nervosa, Biol Psychiatry, 50, 640, 10.1016/S0006-3223(01)01201-X

Hawi, 2002, Serotonergic system and attention deficit hyperactivity disorder (ADHD): a potential susceptibility locus at the 5-HT1B receptor gene in 273 nuclear families from a multi-centre sample, Mol Psychiatry, 7, 718, 10.1038/sj.mp.4001048

New, 2001, Suicide, impulsive aggression, and HTR1B genotype, Biol Psychiatry, 50, 62, 10.1016/S0006-3223(01)01108-8

Arango, 2003, Genetics of the serotonergic system in suicidal behavior, J Psychiatric Research, 37, 375, 10.1016/S0022-3956(03)00048-7

Sanders, 2001, Genetic diversity of the human serotonin receptor 1B (HTR1B) gene, Genomics, 72, 1, 10.1006/geno.2000.6411

Huang, 2003, Substance abuse disorder and major depression are associated with the human 5-HT1B receptor gene (HTR1B) G861C polymorphism, Neuropsychopharmacology, 28, 163, 10.1038/sj.npp.1300000

Hasegawa, 2002, Association of a polymorphism of the serotonin 1B receptor gene and alcohol dependence with inactive aldehyde dehydrogenase-2, J Neural Transm, 109, 513, 10.1007/s007020200042

Sun, 2002, Association study of novel human serotonin 5-HT1B polymorphisms with alcohol dependence in Taiwanese Han, Biol Psychiatry, 51, 896, 10.1016/S0006-3223(01)01366-X

Nöthen, 1994, Identification of genetic variation in the human serotonin 1Dβ receptor gene, Biochem Biophys Res Commun, 205, 1194, 10.1006/bbrc.1994.2792

Gorwood, 2002, Reappraisal of the serotonin 5-HT1B receptor gene in alcoholism: of mice and men, Brain Res Bull, 57, 103, 10.1016/S0361-9230(01)00641-4

Lappalainen, 1998, Linkage of antisocial alcoholism to the serotonin 5-HT1B receptor gene in 2 populations, Arch Gen Psychiatry, 55, 989, 10.1001/archpsyc.55.11.989

Nishiguchi, 2001, No evidence of an association between 5HT1B receptor gene polymorphisms and suicide victims in Japanese population, Am J Med Genet, 105, 343, 10.1002/ajmg.1347

Turecki, 2003, Suicide and serotonin: Study of variation at seven serotonin receptor genes in suicide completers, Am J Med Genet, 118B, 36, 10.1002/ajmg.b.10006

Huang, 1999, Relationship of psychopathology to the human serotonin 1B genotype and receptor binding kinetics in postmortem brain tissue, Neuropsychopharmacology, 21, 238, 10.1016/S0893-133X(99)00030-5

Stefulj, 2004, Serotonin 1B (5HT-1B) receptor polymorphism (G861C) in suicide victims: association studies in German and Slavic population, Am J Med Genet, 127B, 48, 10.1002/ajmg.b.20174

Rujescu, 2003, Lack of association between serotonin 5-HT1B receptor gene polymorphisms and suicidal behavior, Am J Med Genet, 116B, 69, 10.1002/ajmg.b.10732

Nishiguchi, 2002, Lack of an association between 5-HT1A receptor gene structural polymorphisms and suicide victims, Am J Med Genet, 114, 423, 10.1002/ajmg.10414

Cigler, 2001, Novel and previously reported single-nucleotide polymorphisms in the human 5HT1B receptor gene: no association with cocaine or alcohol abuse or dependence, Am J Med Genet, 105, 489, 10.1002/ajmg.1473

Drysdale, 2000, Complex promoter and coding region β2-adrenergic receptor haplotypes alter receptor expression and predict in vivo responsiveness, Proc Natl Acad Sci USA, 97, 10483, 10.1073/pnas.97.19.10483

Duan, 2003, Synonymous mutations in the human dopamine receptor D2 (DRD2) affect mRNA stability and synthesis of the receptor, Hum Mol Genet, 12, 205, 10.1093/hmg/ddg055

Brzustowicz, 1993, Molecular and statistical approaches to the detection and correction in genotype databases, Am J Hum Genet, 54, 1137

Hoehe, 2000, Sequence variability and candidate gene analysis in complex disease: association of μ opioid receptor gene variation with substance dependence, Hum Mol Genet, 9, 2895, 10.1093/hmg/9.19.2895

Proudnikov, 2004, High-throughput molecular haplotype analysis (allelic assignment) of single nucleotide polymorphisms by fluorescent polymerase chain reaction, Anal Biochem, 335, 165, 10.1016/j.ab.2004.08.025

Witcombe, 1998, A homogeneous fluorescence assay for PCR amplification to real-time single-tube genotyping, Clin Chem, 44, 918, 10.1093/clinchem/44.5.918

Ranade, 2001, High-throughput genotyping with single nucleotide polymorphisms, Genome Res, 11, 1262, 10.1101/gr.157801

Glaab, 1999, A novel assay for allelic discrimination that combines the fluorogenic 5′ nuclease polymerase chain reaction (TaqMan) and mismatch amplification mutation assay, Mutat Res, 430, 1, 10.1016/S0027-5107(99)00147-5

Tost, 2002, Molecular haplotyping at high throughput, Nucleic Acids Res, 30, e96, 10.1093/nar/gnf095

Ding, 2003, Direct molecular haplotyping of long-range genomic DNA with M1-PCR, Proc Natl Acad Sci USA, 100, 7449, 10.1073/pnas.1232475100

Rettig, 1995, Federal regulation of methadone treatment

McLellan, 1992, The Fifth Edition of the Addiction Severity Index, J Subst Abuse Treatm, 9, 199, 10.1016/0740-5472(92)90062-S

Miller, 1988, A simple salting out procedure for extracting DNA from human nucleated cells, Nucleic Acids Res, 16, 1215, 10.1093/nar/16.3.1215

LaForge, 2000, Opioid receptor and peptide gene polymorphisms: potential implications for addictions, Eur J Pharmacol, 410, 249, 10.1016/S0014-2999(00)00819-0

Nielsen, 1998, Detecting marker-disease association by testing for Hardy–Weinberg disequilibrium at a marker locus, Am J Hum Genet, 63, 1531, 10.1086/302114

Abecasis, 2000, GOLD – graphical overview of linkage disequilibrium, Bioinformatics, 16, 182, 10.1093/bioinformatics/16.2.182

Ott, 1999, Analysis of human genetic linkage, 10.56021/9780801861406

Ruano, 1989, Direct haplotyping of chromosomal segments from multiple heterozygotes via allele-specific PCR amplification, Nucleic Acids Res, 17, 8392, 10.1093/nar/17.20.8392

Syvänen, 1990, A primer-guided nucleotide incorporation assay in the genotyping of apolipoprotein E, Genomics, 8, 684, 10.1016/0888-7543(90)90255-S

Sarkar, 1991, Haplotyping by double PCR amplification of specific alleles, BioTechniques, 10, 436

Cha, 1992, Mismatch amplification mutation assay (MAMA): application to the c-H-ras gene, PCR Methods and Applications, 2, 14, 10.1101/gr.2.1.14

Okimoto, 1996, Improved PCR amplification of multiple specific alleles (PAMSA) using internally mismatched primers, BioTechniques, 21, 20, 10.2144/96211bm03

Koss, 2000, Interleukin-10 gene promoter polymorphism in English and Polish healthy controls. Polymerase chain reaction haplotyping using 3′ mismatches in forward and reverse primers, Genes Immun, 1, 321, 10.1038/sj.gene.6363669

Freeman, 1951, Note on an exact treatment of contingency, goodness of fit and other problems of significance, Biometrika, 38, 141, 10.1093/biomet/38.1-2.141

Fisher, 1960, The design of experiments

Hill, 1994, Maximum-likelihood estimation of gene location by linkage disequilibrium, Am J Hum Genet, 54, 705

Lewontin, 1964, The interaction of selection and linkage. I. General considerations; heterotic models, Genetics, 49, 49, 10.1093/genetics/49.1.49

Tenenbein, 1972, A double sampling scheme for estimating from misclassified multinomial data with applications to sampling inspection, Technometrics, 14, 187, 10.1080/00401706.1972.10488895

Niu, 2004, Algorithms for inferring haplotypes, Genet Epidemiol, 27, 334, 10.1002/gepi.20024

Gabriel, 2002, The structure of haplotype blocks in the human genome, Science, 296, 2225, 10.1126/science.1069424

Edwards, 2005, Power and sample size calculations in the presence of phenotype errors for case/control genetic association studies, BMC Genet, 6, 18, 10.1186/1471-2156-6-18

Gordon, 2002, Power and sample size calculations for case–control genetic association tests when errors are present: application to single nucleotide polymorphisms, Hum Hered, 54, 22, 10.1159/000066696

Martinez-Arias, 2002, Determination of haploid DNA sequences in humans: application to the glucocerebrosidase pseudogene, DNA Sequence, 13, 9, 10.1080/10425170290019847

Odeberg, 2002, Molecular haplotyping by pyrosequencing, BioTechniques, 33, 1104, 10.2144/02335dd02

Mitra, 2003, Digital genotyping and haplotyping with polymerase colonies, Proc Natl Acad Sci U S A, 100, 5926, 10.1073/pnas.0936399100

Boldt, 2002, A new strategy for mannose-binding lectin gene haplotyping, Hum Mutat, 19, 296, 10.1002/humu.10051

McDonald, 2002, Molecular haplotyping of genomic DNA for multiple single-nucleotide polymorphisms located kilobases apart using long range polymerase chain reaction and intramolecular ligation, Pharmacogenetics, 12, 93, 10.1097/00008571-200203000-00003

Woolley, 2000, Direct haplotyping of kilobase-size DNA using carbon nanotube probes, Nat Biotechnol, 18, 760, 10.1038/77760

Clark, 1990, Inference of haplotypes from PCR-amplified samples of diploid populations, Mol Biol Evol, 7, 111

Terwilliger, 1994, Handbook of human genetic linkage

Excoffier, 1995, Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population, Mol Biol Evol, 12, 921

Stephens, 2001, A new statistical method for haplotype reconstruction from population data, Am J Hum Genet, 68, 978, 10.1086/319501

Fallin, 2000, Accuracy in haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data, Am J Hum Genet, 67, 947, 10.1086/303069

Matsuzaki, 2004, Parallel genotyping of over 10 000 SNPs using a one-primer assay on a high-density oligonucleotide array, Genome Res, 14, 414, 10.1101/gr.2014904

Duan, 2003, Polymorphisms in the 5′-untranslated region of the human serotonin receptor 1B (HTR1B) gene affect gene expression, Mol Psychiatry, 8, 901, 10.1038/sj.mp.4001403

Arango, 2003, Genetics of the serotonergic system in suicidal behavior, J Psychiatr Res, 37, 375, 10.1016/S0022-3956(03)00048-7

Duan, 2005, No association between serotonin 1B receptor gene and schizophrenia in case-control and family-based association study, Neurosci Lett, 376, 93, 10.1016/j.neulet.2004.11.028

Tsai, 2003, Allelic variants of the tryptophan hydroxylase (A218C) and serotonin 1B receptor (A-161T) and personality traits, Neuropsychobiology, 48, 68, 10.1159/000072879

Sinha, 2003, Linkage disequilibrium and haplotype analysis between serotonin receptor 1B gene variations and subtypes of alcoholism, Am J Med Genet, 121B, 83, 10.1002/ajmg.b.20064