Assessment and management of plant genetic diversity: considerations of intra- and interspecific variation

Field Crops Research - Tập 29 - Trang 185-204 - 1992
Stephen Kresovich1, James R. McFerson1
1USDA-ARS Plant Genetic Resources Unit, Cornell University, Geneva, NY, USA

Tài liệu tham khảo

Allard, 1988, Genetic changes associated with the evolution of adaptedness in cultivated plants and their wild progenitors, J. Hered., 79, 225, 10.1093/oxfordjournals.jhered.a110503 Allard, 1990, The genetics of host-pathogen coevolution: implications for genetic resource conservation, J. Hered., 81, 1, 10.1093/oxfordjournals.jhered.a110918 Allard, 1990, Future directions in plant population genetics, evolution and breeding, 1 Asins, 1986, A comparative study on variability and phylogeny of Triticum species. 1. Intraspecific variability, Theor. Appl. Genet., 72, 551, 10.1007/BF00289540 Asins, 1986, A comparative study on variability and phylogeny of Triticum species. 2. Interspecific relationships, Theor. Appl. Genet., 72, 559, 10.1007/BF00289541 Asins, 1987, Concepts involved in measuring genetic variability and its importance in conservation of plant genetic resources, Evol. Trends Plants, 1, 51 Asins, 1989, Distribution of genetic variability in a durum wheat world collection, Theor. Appl. Genet., 77, 287, 10.1007/BF00266199 Astley, 1992, Preservation of genetic diversity and accession integrity, Field Crops Res., 29, 205, 10.1016/0378-4290(92)90026-6 Baum, 1981, Taxonomy of infraspecific variability of cultivated plants, Kulturpflanze, 29, 209, 10.1007/BF02014751 Baum, 1986, Computer methods in infraspecific taxonomy of wild and cultivated plants, 239 Baverstock, 1990, Sampling design, 13 Bennett, 1985, Intraspecific variation in DNA amount and the nucleotypic dimension in plant genetics, 283 Bernatzky, 1989, Restriction fragments as molecular markers for germ-plasm evaluation and utilization, 353 Brandenburg, 1986, Objectives in classification of cultivated plants, 87 Breese, 1989 Brown, 1978, Isozymes, plant population genetic structure, and genetic conservation, Theor. Appl. Genet., 52, 145, 10.1007/BF00282571 Brown, 1989, The case for core collections, 136 Brown, 1992, Sampling strategies for genetic variation in ex situ collections of endangered plant species, 99 1989 1990 Brown, 1990, Genetic structure of Glycine canescens, a perennial relative of soybean, Theor. Appl. Genet., 79, 729, 10.1007/BF00224237 Chang, 1989, The case for large collections, 123 Clegg, 1989, Analyses of molecular diversity within and among plant species, 51 Clegg, 1990, Molecular diversity in plant populations, 98 Crawford, 1990 Crisci, 1984, Taxonomic congruence, Taxon, 33, 233, 10.2307/1221163 Crossa, 1988, Theory and practice in determining sample size for conservation of maize germplasm, 149 Crossa, 1989, Methodologies for estimating the sample size required for genetic conservation of outbreeding crops, Theor. Appl. Genet., 77, 153, 10.1007/BF00266180 Dallas, 1988, Detection of DNA ‘fingerprints’ of cultivated rice by hybridization with human minisatellite DNA probe, 85, 6831 de Candolle, 1959 Doebley, 1989, Application of RFLPs to plant systematics, 57 Doebley, 1987, Restriction site variation in the Zea chloroplast genome, Genetics, 117, 139, 10.1093/genetics/117.1.139 Doyle, 1990, Chloroplast DNA polymorphism and phylogeny in the B genome of Glycine subgenus Glycine (Leguminosae), Am. J. Bot., 77, 772, 10.1002/j.1537-2197.1990.tb14467.x Duvick, 1984, Genetic diversity in major farm crops on the farm and in reserve, Econ. Bot., 38, 161, 10.1007/BF02858829 Edwards, 1992, Use of molecular markers in the evaluation and introgression of genetic diversity for quantitative traits, Field Crops Res., 29, 241, 10.1016/0378-4290(92)90028-8 Ehrenfeld, 1988, Why put a value on biodiversity?, 212 Everitt, 1979, Unresolved problems in cluster analysis, Biometrics, 35, 169, 10.2307/2529943 Figdore, 1988, Assessment of the degree of restriction fragment length polymorphism in Brassica, Theor. Appl. Genet., 75, 833, 10.1007/BF00258042 Frankel, 1989, Principles and strategies of evaluation, 245 Frankel, 1981 Gepts, 1989, Genetic diversity in pearl millet [Pennisetum glaucum (L.) R. Br.] at the DNA sequence level, J. Hered., 80, 203, 10.1093/oxfordjournals.jhered.a110836 Goodman, 1990, Genetic and germ plasm stocks worth conserving, J. Hered., 81, 11, 10.1093/oxfordjournals.jhered.a110919 Gould, 1990, The golden rule—a proper scale for our environmental crisis, Nat. Hist., 9, 24 Grant, 1981 Hamrick, 1990, Allozyme diversity in plant species, 43 Harlan, 1975 Harlan, 1971, Toward a rational classification of cultivated plants, Taxon, 20, 509, 10.2307/1218252 Hartl, 1989 Hawkes, 1983 1990 Hilu, 1989, taxonomy of cultivated plants, 33 Hosaka, 1990, Development and chromosomal localization of genome-specific DNA markers of Brassica and the evolution of amphidiploids and n = 9 diploid species, Genome, 33, 131, 10.1139/g90-021 Hoyt, 1988 Hull, 1988 Jain, 1975, Geographical patterns of phenotypic diversity in a world collection of durum wheat, Crop Sci., 15, 700, 10.2135/cropsci1975.0011183X001500050026x James, 1990, Multivariate analysis in ecology and systematics: panacea or Pandora's box?, Ann. Rev. Ecol. Syst., 21, 129, 10.1146/annurev.es.21.110190.001021 Kloppenburg, 1988 Lande, 1988, Genetics and demography in biological conservation, Science, 241, 1455, 10.1126/science.3420403 Laurie, 1985, Nuclear DNA content in the genera Zea and Sorghum: intergeneric, interspecific, and intraspecific variation, Heredity, 55, 307, 10.1038/hdy.1985.112 Levy, 1991, DNA fingerprinting with a dispersed repeated sequence resolves pathotype diversity in the rice blast fungus, Plant Cell, 3, 95, 10.2307/3869203 Marshall, 1989, Limitations to the use of germplasm collections, 105 Marx, 1988, A suite of mutants that modify pattern formation in pea leaves, Plant Mol. Biol. Rep., 5, 311, 10.1007/BF02668994 Mayr, 1982 Mcgrath, 1990, Identification of Brassica oleracea monosomic alien chromosome addition lines with molecular markers reveals extensive gene duplication, Mol. Gen. Genet., 223, 198, 10.1007/BF00265054 Miller, 1990, RFLP analysis of phylogenetic relationships and genetic variation in the genus Lycopersicon, Theor. Appl. Genet., 80, 437, 10.1007/BF00226743 Moritz, 1990, Molecular systematics: context and controversies, 1 Nei, 1987 Nybom, 1990, DNA ‘fingerprints’ reveal genotypic distributions in natural populations of blackberries and raspberries (Rubus, Rosaceae), Am. J. Bot., 77, 883, 10.1002/j.1537-2197.1990.tb15183.x Nybom, 1990, DNA ‘fingerprints’ applied to paternity analysis in apples (Malus × domestica), Theor. Appl. Genet., 79, 763, 10.1007/BF00224242 Nybom, 1990, Genetic variation detected by use of the M13 ‘DNA fingerprint’ probe in Malus, Prunus, and Rubus (Rosaceae), Theor. Appl. Genet., 79, 153, 10.1007/BF00225944 Office of Technology Assessment, 1987 Oldfield, 1984 Olson, 1989, A common language for physical mapping of the human genome, Science, 245, 1434, 10.1126/science.2781285 Palmer, 1982, Chloroplast DNA evolution and phylogenetic relationships in Lycopersicon, 79, 5006 Pamilo, 1990, Statistical tests of phenograms based on genetic distances, Evolution, 44, 689, 10.2307/2409445 Peeters, 1988, The emergence of new centres of diversity; evidence from barley, Theor. Appl. Genet., 76, 17, 10.1007/BF00288826 Peeters, 1988, Germplasm collections and breeding needs in Europe, Econ. Bot., 42, 503, 10.1007/BF02862795 Peeters, 1989, Hierarchical cluster analysis as a tool to manage variation in germplasm collections, Theor. Appl. Genet., 78, 42, 10.1007/BF00299751 Peeters, 1990, The use of ecogeographical data in the exploitation of variation from gene banks, Theor. Appl. Genet., 80, 110, 10.1007/BF00224023 percy, 1990, Allozyme evidence for the origin and diversification of Gossypium barbadense L., Theor. Appl. Genet., 79, 529, 10.1007/BF00226164 Quiros, 1988, Exploring the role of x=7 species in Brassica evolution: hybridization with B. nigra and B. oleracea, Heredity, 79, 351, 10.1093/oxfordjournals.jhered.a110527 Rabinowitz, 1981, Seven forms of rarity, 205 Raven, 1976, Systematics and plant population biology, Syst. Bot., 1, 284, 10.2307/2418721 Riedel, 1990, Denaturing gradient gel electrophoresis identifies genomic DNA polymorphism with high frequency in maize, Theor. Appl. Genet., 80, 1, 10.1007/BF00224008 Rivin, 1983, Evaluation of genomic variability at the nucleic acid level, Plant Mol. Biol. Rep., 1, 9, 10.1007/BF02680256 Rumbaugh, 1988, Variability in a collection of alfalfa germplasm from Morocco, Crop Sci., 28, 605, 10.2135/cropsci1988.0011183X002800040005x Schaal, 1991, Molecular variation in native plant populations, Trends Ecol. Evol., 6, 329, 10.1016/0169-5347(91)90041-U Schaal, 1992, Methods of assessing genetic variation, 123 Seberg, 1989, Genome analysis, phylogeny, and classification, Pl. Syst. Evol., 166, 159, 10.1007/BF00935946 Shands, 1990, Plant genetic resources conservation: the role of the gene bank in delivering useful genetic materials to the research scientist, J. Hered., 81, 7, 10.1093/oxfordjournals.jhered.a110928 Simmonds, 1962, Variability in crop plants, its use and conservation, Biol. Rev., 37, 422, 10.1111/j.1469-185X.1962.tb01620.x 1976 Singh, 1991, Genetic diversity in cultivated common beans: II. marker-based analysis of morphological and agronomic traits, Crop Sci., 31, 23, 10.2135/cropsci1991.0011183X003100010005x Singh, 1991, Genetic diversity in cultivated common bean: I. allozymes, Crop Sci., 31, 19, 10.2135/cropsci1991.0011183X003100010004x Slatkin, 1987, Gene flow and the geographic structure of natural populations, Science, 236, 787, 10.1126/science.3576198 Smith, 1989, The description and assessment of distance between inbred lines of maize: I. The use of morphological traits as descriptors, Maydica, 34, 141 Smith, 1989, The description and assessment of distances between inbred lines of maize: II. The utility of morphological, biochemical, and descriptors and a scheme for testing of distinctiveness between inbred line, Maydica, 34, 151 Smith, 1990, Similarities among a group of elite maize inbreds as measured by pedigree, F1 grain yield, grain yield, heterosis, and RFLPs, Theor. Appl. Genet., 80, 833, 10.1007/BF00224201 Song, 1988, Brassica taxonomy based on nuclear restriction fragment length polymorphisms (RFLPs). 2. Preliminary analysis of subspecies within B. rapa (syn. campestris) and B. oleracea, Theor. Appl. Genet., 76, 593, 10.1007/BF00260914 1989 Spagnoletti Zeuli, 1987, Geographic diversity for quantitative spike characters in a world collection of durum wheat, Crop Sci., 27, 235, 10.2135/cropsci1987.0011183X002700020022x Stace, 1976, The study of infraspecific variation, Curr. Adv. Plant Sci., 23, 513 1989 Strauss, 1988, Quantification of diversity in ex situ plant collections, Diversity, 16, 30 Stuessy, 1990 1986 Sytsma, 1986, Chloroplast DNA evolution and the phylogenetic relationships in Clarkia sect. Peripetasma (Onagraceae), Evolution, 40, 1248 Syvanen, 1989, Classical plant taxonomic ambiguities extend to the molecular level, J. Mol. Evol., 28, 536, 10.1007/BF02602934 Talbert, 1990, Tripsacum andersonii is a natural hybrid involving Zea and Tripsacum: molecular evidence, Am. J. Bot., 77, 722, 10.1002/j.1537-2197.1990.tb14461.x Tomato Genetics Stock Center Task Force, 1988 Uitterlinden, 1989, Two-dimensional DNA typing, Trends Biotech., 7, 336, 10.1016/0167-7799(89)90033-4 Vavilov, 1950 Weir, 1990 Weir, 1990, Intraspecific differentiation, 373 Wendel, 1989, Genetic diversity, introgression, and independent domestication of old world cultivated cottons, Am. J. Bot., 76, 1795, 10.1002/j.1537-2197.1989.tb15169.x Williams, 1990, DNA polymorphisms amplified by arbitrary primers are useful as genetic markers, Nucleic Acids Res., 18, 6531, 10.1093/nar/18.22.6531