Analysis of the kinetics of the membrane potential generated by cytochrome c oxidase upon single electron injection
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Iwata, 1995, Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans, Nature, 376, 660, 10.1038/376660a0
Tsukihara, 1995, Structure of metal sites of oxidized bovine heart cytochrome c oxidase at 2.8 Å, Science, 269, 1069, 10.1126/science.7652554
Yoshikawa, 1998, Redox-coupled structural changes in bovine heart cytochrome c oxidase, Science, 280, 1723, 10.1126/science.280.5370.1723
Wikstrom, 1977, Proton pump coupled to cytochrome c oxidase in mitochondria, Nature, 266, 271, 10.1038/266271a0
Gennis, 1998, How does cytochrome oxidase pump protons?, Proc. Natl. Acad. Sci. U. S. A., 95, 12747, 10.1073/pnas.95.22.12747
Michel, 1999, Cytochrome c oxidase: catalytic cycle and mechanism of proton pumping—A discussion, Biochemistry, 38, 15129, 10.1021/bi9910934
Michel, 1999, Proton pumping by cytochrome c oxidase, Nature, 402, 602, 10.1038/45133
Wikström, 2000, Proton translocation by cytochrome c oxidase: a rejoinder to recent criticism, Biochemistry, 39, 3515, 10.1021/bi9925322
Musser, 1995, Understanding the cytochrome c oxidase proton pump: the thermodynamics of redox linkage, Biophys. J., 68, 2543, 10.1016/S0006-3495(95)80437-6
Riistama, 1997, Bound water in proton translocation mechanism of the heme-copper oxidase, FEBBS Lett., 414, 275, 10.1016/S0014-5793(97)01003-X
Michel, 1998, The mechanism of proton pumping by cytochrome c oxidase, Proc. Natl. Acad. Sci. U. S. A., 95, 12819, 10.1073/pnas.95.22.12819
Das, 1999, Redox-linked transient deprotonation at the binuclear site in the aa3-type quinol oxidase from Acidianus ambivalens: implications for proton translocation, Proc. Natl. Acad. Sci. U. S. A., 96, 9591, 10.1073/pnas.96.17.9591
Wikström, 2000, Mechanism of proton translocation by cytochrome c oxidase: a new four-stroke histidine cycle, Biochim. Biophys. Acta, 1458, 188, 10.1016/S0005-2728(00)00068-2
Brzezinski, 2003, Redox-driven proton pumping by heme-copper oxidases, Biochim. Biophys. Acta, 1605, 1, 10.1016/S0005-2728(03)00079-3
Tsukihara, 2003, The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process, Proc. Natl. Acad. Sci., 100, 15304, 10.1073/pnas.2635097100
Wikstrom, 2003, Water-gated mechanism of proton translocation by cytochrome c oxidase, Biochim Biophys Acta, 1604, 61, 10.1016/S0005-2728(03)00041-0
Siletsky, 2004, Transmembrane charge separation during the ferryl-oxo→oxidized transition in a nonpumping mutant of cytochrome c oxidase, J. Biol. Chem., 279, 52558, 10.1074/jbc.M407549200
Zaslavsky, 1993, Flash-induced membrane potential generation by cytochrome c oxidase, FEBS Lett., 336, 389, 10.1016/0014-5793(93)80843-J
Konstantinnov, 1997, The Role of the two proton input channels in cytochrome c oxidase from Rhodobacter sphaeroides probed by the effects of site-directed mutations on time-resolved electrogenic intraprotein proton transfer, Proc. Natl. Acad. Sci. U. S. A., 94, 9085, 10.1073/pnas.94.17.9085
Ruitenberg, 2000, Single-electron reduction of the oxidized state is coupled to proton uptake via the k pathway in paracoccus denitrificans cytochrome c oxidase, Proc. Natl. Acad. Sci. U. S. A., 97, 4632, 10.1073/pnas.080079097
Ruitenberg, 2002, Reduction of cytochrome c oxidase by a second electron leads to proton translocation, Nature, 417, 99, 10.1038/417099a
Jasaitis, 1999, Assignment and charge translocation stoichiometries of the major electrogenic phases in the region of cytochrome c oxidase with dioxygen, Biochemistry, 38, 2697, 10.1021/bi982275l
Bloch, 2004, The catalytic cycle of cytochrome c oxidase is not the sum of its two halves, Proc. Natl. Acad. Sci. U. S. A., 101, 529, 10.1073/pnas.0306036101
Popovic, 2004, Electrostatic study of the proton pumping mechanism in cytochrome c oxidase, J. Am. Chem. Soc., 126, 1858, 10.1021/ja038267w
Popovic, 2004, Proton pumping mechanism and catalytic cycle of cytochrome c oxidase: Coulomb pump model with kinetic gating, FEBS Lett., 566, 126, 10.1016/j.febslet.2004.04.016
Stuchebrukhov, 2003, Electron transfer coupled to proton translocation. Proton pumps, cytochrome oxidase, and biological energy transduction, J. Theor. Comp. Chem., 2, 91, 10.1142/S0219633603000318
Zheng, 2003, Computer simulations of internal water in cytochrome c oxidase, Biochim. Biophys. Acta, 1557, 99, 10.1016/S0005-2728(03)00002-1
Tashiro, 2005, Thermodynamic properties of internal water molecules in the hydrophobic cavity around the catalytic center of cytochrome c oxidase, J. Phys. Chem., B, 109, 1015, 10.1021/jp0462456
Verkhovskaya, 1997, Glutamic acid 286 in subunit I of cytochrome bo3 is involved in proton translocation, Proc. Natl. Acad. Sci. U. S. A., 94, 10128, 10.1073/pnas.94.19.10128
Adelroth, 1997, Glutamate 286 in cytochrome aa3 from Rhodobacter sphaeroides is involved in proton uptake during the reaction of the fully-reduced enzyme with dioxygen, Biochemistry, 36, 13824, 10.1021/bi9629079
Wikstrom, 2000, The role of the D- and K-pathways of proton transfer in the function of the haem-copper oxidases, Biochim. Biophys. Acta, 1459, 514, 10.1016/S0005-2728(00)00191-2
Zaslavsky, 2000, Proton pumping by cytochrome oxidase: progress, problems and postulates, Biochim. Biophys. Acta, 1458, 164, 10.1016/S0005-2728(00)00066-9
Popovic, 2005, DFT/Electrostatic calculations of pKa values in cytochrome c oxidase, J. Phys. Chem., B, 109, 3616, 10.1021/jp046535m
Popovic, 2005, Proton exit channels in cytochrome c oxidase, J. Phys. Chem., B, 109, 1999, 10.1021/jp0464371
Wikstrom, 1994, Mechanism of proton translocation by respiratory oxidases. The histidine cycle, Biochim. Biophys. Acta, 1187, 106, 10.1016/0005-2728(94)90093-0
Rich, 1995, Towards an understanding of the chemistry of oxygen reduction and proton translocation in the iron-copper respiratory oxidases, Aust. J. Plant Physiol., 22, 479, 10.1071/PP9950479
Kotelnikov, 2001, Kinetic treatment of coupled electron and proton transfer in flash-photolysis experiments on carbon monoxide-inhibited mixed-valence cytochrome c oxidase, J. Phys. Chem., B, 105, 5789, 10.1021/jp010001t
Hallen, 1994, Internal electron transfer in cytochrome c oxidase is coupled to the protonation of a group close to the bimetallic site, Biochemistry, 33, 1467, 10.1021/bi00172a024
Adelroth, 1995, Internal electron transfer in cytochrome c oxidase from Rhodobacter sphaeroides, Biochemistry, 34, 2844, 10.1021/bi00009a014
Adelroth, 1996, Kinetic coupling between electron and proton transfer in cytochrome c oxidase: simultaneous measurements of conductance and absorbance changes, Proc. Natl. Acad. Sci. U. S. A., 93, 12292, 10.1073/pnas.93.22.12292
Namslauer, 2003, Intramolecular proton-transfer reactions in a membrane-bound proton pump: the effect of Ph on the peroxy to 'ferryl transition in cytochrome c oxidase, Biochemistry, 42, 1488, 10.1021/bi026524o
Puustinen, 1997, Fourier transform infrared evidence for connectivity between CuB and glutamic acid 286 in cytochrome bo3 from Escherichia coli, Biochemistry, 36, 13195, 10.1021/bi971091o
Karpefors, 2000, The onset of the deuterium isotope effect in cytochrome c oxidase, Biochemistry, 39, 5045, 10.1021/bi9925221
Karpefors, 2000, Localized control of proton transfer through the d-pathway in cytochrome c oxidase: application of the proton-inventory technique, Biochemistry, 39, 6850, 10.1021/bi992719t
Mills, 1998, Proton uptake and release in cytochrome c oxidase: separate pathways in time and space, Biochim. Biophys. Acta, 1365, 46, 10.1016/S0005-2728(98)00040-1
Pawate, 2002, N139D mutant lacs pumping but has accelerated turnover, Biochemistry, 41, 13417, 10.1021/bi026582+