Analysis of the Redox Oscillations in the Circadian Clockwork
Tài liệu tham khảo
Asher, 2008, SIRT1 regulates circadian clock gene expression through PER2 deacetylation, Cell, 134, 317, 10.1016/j.cell.2008.06.050
Barranco-Medina, 2009, The oligomeric conformation of peroxiredoxins links redox state to function, FEBS Letters, 583, 1809, 10.1016/j.febslet.2009.05.029
Beaver, 2012, Circadian regulation of glutathione levels and biosynthesis in Drosophila melanogaster, PLoS One, 7, e50454, 10.1371/journal.pone.0050454
Blanco, 2007, Diurnal variation in glutathione and cysteine redox states in human plasma, The American Journal of Clinical Nutrition, 86, 1016, 10.1093/ajcn/86.4.1016
Brody, 1973, Circadian rhythms in Neurospora: Spatial differences in pyridine nucleotide levels, Science, 180, 498, 10.1126/science.180.4085.498
Bryk, 2000, Peroxynitrite reductase activity of bacterial peroxiredoxins, Nature, 407, 211, 10.1038/35025109
Circu, 2010, Reactive oxygen species, cellular redox systems, and apoptosis, Free Radical Biology and Medicine, 48, 749, 10.1016/j.freeradbiomed.2009.12.022
Cox, 2009, Mitochondrial peroxiredoxin 3 is more resilient to hyperoxidation than cytoplasmic peroxiredoxins, Biochemical Journal, 421, 51, 10.1042/BJ20090242
Cox, 2009, Redox potential and peroxide reactivity of human peroxiredoxin 3, Biochemistry, 48, 6495, 10.1021/bi900558g
Cox, 2010, Measuring the redox state of cellular peroxiredoxins by immunoblotting, Methods in Enzymology, 474, 51, 10.1016/S0076-6879(10)74004-0
Crowe, 2014, Atmospheric oxygenation three billion years ago, Nature, 501, 535, 10.1038/nature12426
Edgar, 2012, Peroxiredoxins are conserved markers of circadian rhythms, Nature, 485, 459, 10.1038/nature11088
Farooqui, 1984, Circadian periodicity of tissue glutathione and its relationship with lipid peroxidation in rats, Life Sciences, 34, 2413, 10.1016/0024-3205(84)90430-2
Flohé, 2007, Peroxiredoxin systems: Structures and fuctions, Vol. 44
Gupta, 2011, Thiol-disulfide redox dependence of heme binding and heme ligand switching in nuclear hormone receptor rev-erb, The Journal of Biological Chemistry, 286, 4392, 10.1074/jbc.M110.193466
Hall, 2011, Structure-based insights into the catalytic power and conformational dexterity of peroxiredoxins, Antioxidants & Redox Signaling, 15, 795, 10.1089/ars.2010.3624
Hirayama, 2007, Circadian control by the reduction/oxidation pathway: Catalase represses light-dependent clock gene expression in the zebrafish, Proceedings of the National Academy of Sciences of the United States of America, 104, 15747, 10.1073/pnas.0705614104
Ivleva, 2005, LdpA: A component of the circadian clock senses redox state of the cell, The EMBO Journal, 24, 1202, 10.1038/sj.emboj.7600606
Kaminsky, 1984, Analysis of the circadian rhythm in energy metabolism of rat liver, The International Journal of Biochemistry, 16, 629, 10.1016/0020-711X(84)90032-6
Kil, 2012, Feedback control of adrenal steroidogenesis via H, Molecular Cell, 46, 584, 10.1016/j.molcel.2012.05.030
Kim, 1985, Nonenzymatic cleavage of proteins by reactive oxygen species generated by dithiothreitol and iron, The Journal of Biological Chemistry, 260, 15394, 10.1016/S0021-9258(17)36264-6
Kondratov, 2006, Early aging and age-related pathologies in mice deficient in BMAL1, the core component of the circadian clock, Genes & Development, 20, 1868, 10.1101/gad.1432206
Konhauser, 2012, Aerobic bacterial pyrite oxidation and acid rock drainage during the Great Oxidation Event, Nature, 478, 369, 10.1038/nature10511
Krishnan, 2008, Circadian regulation of response to oxidative stress in drosophila melanogaster, Biochemical and Biophysical Research Communications, 374, 299, 10.1016/j.bbrc.2008.07.011
Lee, 2007, Human peroxiredoxin 1 and 2 are not duplicate proteins: The unique presence of CYS83 in Prx1 underscores the structural and functional differences between Prx1 and Prx2, The Journal of Biological Chemistry, 282, 22011, 10.1074/jbc.M610330200
Manevich, 2004, Activation of the antioxidant enzyme 1-CYS peroxiredoxin requires glutathionylation mediated by heterodimerization with πGST, Proceedings of the National Academy of Sciences of the United States of America, 101, 3780, 10.1073/pnas.0400181101
Musiek, 2013, Circadian clock proteins regulate neuronal redox homeostasis and neurodegeneration, Journal of Clinical Investigation, 123, 5389, 10.1172/JCI70317
O’Neill, 2011, Circadian clocks in human red blood cells, Nature, 469, 498, 10.1038/nature09702
O’Neill, 2011, Circadian rhythms persist without transcription in a eukaryote, Nature, 469, 554, 10.1038/nature09654
Park, 2014, 2-Cys peroxiredoxins: Emerging hubs determining redox dependency of mammalian signaling networks, International Journal of Cell Biology, 2014, 1, 10.1155/2014/715867
Peskin, 2013, Hyperoxidation of peroxiredoxins 2 and 3: Rate constants for the reactions of the sulfenic acid of the peroxidatic cysteine, The Journal of Biological Chemistry, 288, 14170, 10.1074/jbc.M113.460881
Peskin, 2007, The high reactivity of peroxiredoxin 2 with H2O2 is not reflected in its reaction with other oxidants and thiol reagents, The Journal of Biological Chemistry, 282, 11885, 10.1074/jbc.M700339200
Plautz, 1997, Quantitative analysis of Drosophila period gene transcription in living animals, Journal of Biological Rhythms, 12, 204, 10.1177/074873049701200302
Poynton, 2014, Peroxiredoxins as biomarkers of oxidative stress, Biochimica et Biophysica Acta (BBA)—General Subjects, 1840, 906, 10.1016/j.bbagen.2013.08.001
Radha, 1985, Glutathione levels in human platelets display a circadian rhythm in vitro, Thrombosis Research, 40, 823, 10.1016/0049-3848(85)90319-6
Ramsey, 2009, Circadian clock feedback cycle through NAMPT-mediated NAD+biosynthesis, Science, 324, 651, 10.1126/science.1171641
Randall, 2013, Peroxiredoxins as preferential targets in H2O2-induced signaling, Methods in Enzymology, 527, 41, 10.1016/B978-0-12-405882-8.00003-9
Reddy, 2014, Metabolic and nontranscriptional circadian clocks: Eukaryotes, Annual Review of Biochemistry, 83, 165, 10.1146/annurev-biochem-060713-035623
Rhee, 2012, Peroxiredoxin functions as a peroxidase and a regulator and sensor of local peroxides, The Journal of Biological Chemistry, 287, 4403, 10.1074/jbc.R111.283432
Rutter, 2001, Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors, Science, 293, 510, 10.1126/science.1060698
Scheer, 2011, The human endogenous circadian system causes greatest platelet activation during the biological morning independent of behaviors, PLoS One, 6, e24549, 10.1371/journal.pone.0024549
Stangherlin, 2013, Regulation of circadian clocks by redox homeostasis, The Journal of Biological Chemistry, 288, 26505, 10.1074/jbc.R113.457564
Wagner, 1974, Cycles in plants, Journal of Interdisciplinary Cycle Research, 5, 231, 10.1080/09291017409359428
Wang, 2012, Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons, Science, 337, 839, 10.1126/science.1222826
Woo, 2003, Reversible oxidation of the active site cysteine of peroxiredoxins to cysteine sulfinic acid: Immunoblot detection with antibodies specific for the hyperoxidized cysteine-containing sequence, The Journal of Biological Chemistry, 278, 47361, 10.1074/jbc.C300428200
Wood, 2003, Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling, Science, 300, 650, 10.1126/science.1080405
Wood, 2002, Dimers to doughnuts: Redox-sensitive oligomerization of 2-cysteine peroxiredoxins, Biochemistry, 41, 5493, 10.1021/bi012173m
Wood, 2003, Structure, mechanism and regulation of peroxiredoxins, Trends in Biochemical Sciences, 28, 32, 10.1016/S0968-0004(02)00003-8
Yang, 2002, Inactivation of human peroxiredoxin I during catalysis as the result of the oxidation of the catalytic site cysteine to cysteine-sulfinic acid, The Journal of Biological Chemistry, 277, 38029, 10.1074/jbc.M206626200
Zander, 1998, Disulfide bond catalysis in E. coli, Methods in Enzymology, 290, 59, 10.1016/S0076-6879(98)90007-6
