Analysis of structural and physico-chemical parameters involved in the specificity of binding between α-amylases and their inhibitors

Protein Engineering, Design and Selection - Tập 13 Số 3 - Trang 167-177 - 2000
M.C.M. Da Silva1, Maria Fátima Grossi‐de‐Sá, Maarten J. Chrispeels, Roberto Coiti Togawa, Goran Neshich
1Laboratório de Biologia Molecular and Laboratório de Bioinformática, EMBRAPA, Recursos Genéticos e Biotecnologia, CP 02372, CEP 70770 Brasília, DF, Brazil.

Tóm tắt

Từ khóa


Tài liệu tham khảo

Bacon,D.J. and Moult,J. (1992) J. Mol. Biol., 225, 849–858.

Bompard–Gilles,C., Rousseau,P., Rougé,P. and Payan,F. (1996) Structure, 4, 1441–1452.

Cherfils,J., Duquerroy,S. and Janin,J. (1991) Proteins Struct. Funct. Genet., 11, 271–280.

Cherfils,J. and Janin,J. (1993) Curr. Opin. Struct. Biol., 3, 265–269.

Connolly,M.L. (1986) Biopolymers, 25, 1229–1247.

Chothia,C. and Janin,J. (1975) Nature, 256, 705–708.

Chothia,C. (1974) Nature, 248, 338–339.

Gilson,M. and Honig,B. (1986) Biopolymers, 25, 2097–2119.

Grossi de Sá,M.F. and Chrispeels,M.J. (1997) Insect Bioch. Mol. Biol., 27, 271–281.

Horton,N. and Lewis,M. (1992) Protein Sci., 1, 169–181.

Israelachvili,J. and Wennerstrom,H. (1996) Nature, 379, 219–225.

Jackson,R. and Stenberg,M.J.E. (1995) J. Mol. Biol., 250, 258–275.

Janin,J. (1995) Biochemie, 77, 497–505.

Jones,S. and Thornton,J. (1996) Proc. Natl Acad. Sci. USA, 93, 13–20.

Krem,M.M. and Dicera,E. (1998) Proteins Struct. Funct. Genet., 30, 34–42.

Laskowski,R.A., MacArthur,M.W., Moss,D.S. and Thornton,J.M. (1993) J. Appl. Crystallogr., 26, 283–291.

Matthew,J.B. (1985) Annu. Rev. Biophys. Chem., 14, 387–401.

Meyer,E. (1992) Protein Sci., 1:12, 1543–1562.

Mirkov,T.E., Evans,S.V., Wahstrom,J., Gomes,L., Young,N.M. and Chrispeels,J.M. (1995) Glycobiology, 5, 45–50.

Moreno,J. and Chrispeels,M.J. (1989) Proc. Natl Acad. Sci. USA, 86, 7885–7889.

Neshich,G., Togawa,R.,Vilella,W. and Honig,B. (1998) Brookhaven Protein Data Bank Q. Newsl., 85, 6–7.

Nicholls,A., Sharp,K. and Honig,B. (1991) Protein Struct. Funct. Genet., 11, 281–286.

Norel,R., Lin,S.L., Wolfson,H.J. and Nussinov,R. (1995) J. Mol. Biol., 252, 263–273.

Raymer,M.L., Sanschagrin,P.C., Punch,W.F., Venkataraman,S., Goodman,E.D. and Kuhn,L.A. (1997) J. Mol. Biol., 265, 445–464.

Sali,A. and Blundell,T.L. (1993) J. Mol. Biol., 234, 779–815.

Schoichet,B.K. and Kuntz,I.D. (1991) J. Mol. Biol., 221, 327–346.

Shindyalov,I.N. and Bourne,P.E. (1998) Protein Engng, 11, 739–747.

Strobl,S., Maskos,K., Betz,M., Wiegand,G., Huber,R., Gomis-Ruth,F.X. and Glockshuber,R (1998) J. Mol. Biol., 278, 617–628.

Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) Nucleic Acids Res., 22, 4673–4680.

Xu,D.,Tsai,C.J. and Nussinov,R. (1997) Protein Engng, 10, 999–1012.

Xu,D., Sheves,M. and Schulten,K. (1995) Biophysics J., 69, 2745–2760.

Warshel,A. (1979) Photochem. Photobiol., 30, 285–290.

Warshel,A. (1986) Methods Enzymol., 127, 578–587.