Altered brassinolide sensitivity1 transcriptionally inhibits chlorophyll synthesis and photosynthesis capacity in tomato

Ahammed GJ, Yuan HL, Ogweno JO et al (2012) Brassinosteroid alleviates phenanthrene and pyrene phytotoxicity by increasing detoxification activity and photosynthesis in tomato. Chemosphere 86:546–555. https://doi.org/10.1016/j.chemosphere.2011.10.038

Axelsson E, Lundqvist J, Sawicki A et al (2006) Recessiveness and dominance in barley mutants deficient in Mg-chelatase subunit D, an AAA protein involved in chlorophyll biosynthesis. Plant Cell 18:3606–3616. https://doi.org/10.1105/tpc.106.042374

Brzezowski P, Sharifi MN, Dent RM et al (2016) Mg chelatase in chlorophyll synthesis and retrograde signaling in Chlamydomonas reinhardtii: CHLI2 cannot substitute for CHLI1. J Exp Bot 67:3925–3938. https://doi.org/10.1093/jxb/erw004

Chono M, Honda I, Zeniya H et al (2003) A semidwarf phenotype of barley uzu results from a nucleotide substitution in the gene encoding a putative brassinosteroid receptor. Plant Physiol 133:1209–1219. https://doi.org/10.1104/pp.103.026195

Dai Y, Shen Z, Liu Y et al (2009) Effects of shade treatments on the photosynthetic capacity, chlorophyll fluorescence, and chlorophyll content of Tetrastigma hemsleyanum Diels et Gilg. Environ Exp Bot 65:177–182. https://doi.org/10.1016/j.envexpbot.2008.12.008

Farag M, Najeeb U, Yang J et al (2017) Nitric oxide protects carbon assimilation process of watermelon from boron-induced oxidative injury. Plant Physiol Biochem 111:166–173. https://doi.org/10.1016/j.plaphy.2016.11.024

Feng Y, Yin Y, Fei S (2015) Down-regulation of BdBri1, a putative brassinosteroid receptor gene produces a dwarf phenotype with enhanced drought tolerance in Brachypodium distachyon. Plant Sci 234:163–173. https://doi.org/10.1016/j.plantsci.2015.02.015

Gonzalez N, de Bodt S, Sulpice R et al (2010) Increased leaf size: different means to an end. Plant Physiol 153:1261–1279. https://doi.org/10.1104/pp.110.156018

Guo F, Yu H, Xu Q, Deng X (2015) Transcriptomic analysis of differentially expressed genes in an orange-pericarp mutant and wild type in pummelo (Citrus grandis). BMC Plant Biol 15:44. https://doi.org/10.1186/s12870-015-0435-3

Gururani MA, Venkatesh J, Tran LSP (2015) Regulation of photosynthesis during abiotic stress-induced photoinhibition. Mol Plant 8(9):1304–1320. https://doi.org/10.1016/j.molp.2015.05.005

He HY, He LF, Gu MH, Li XF (2012) Nitric oxide improves aluminum tolerance by regulating hormonal equilibrium in the root apices of rye and wheat. Plant Sci 183:123–130. https://doi.org/10.1016/j.plantsci.2011.07.012

He Y, Li L, Zhang Z, Wu JL (2018) Identification and comparative analysis of premature senescence leaf mutants in rice (Oryza sativa L.). Int J Mol Sci 19(1):140. https://doi.org/10.3390/ijms19010140

Hedden P (2003) The genes of the green revolution. Trends Genet 19(1):5–9. https://doi.org/10.1016/S0168-9525(02)00009-4

Hiller RG, Wrench PM, Sharples FP (1995) The light-harvesting chlorophyll a-c-binding protein of dinoflagellates: a putative polyprotein. FEBS Lett 363:175–178. https://doi.org/10.1016/0014-5793(95)00297-M

Jaillais Y, Vert G (2016) Brassinosteroid signaling and Bri1 dynamics went underground. Curr Opin Plant Biol 33:92–100. https://doi.org/10.1016/j.pbi.2016.06.014

Jansson S (1999) A guide to the Lhc genes and their relatives in Arabidopsis. Trends Plant Sci 4:236–240. https://doi.org/10.1016/S1360-1385(99)01419-3

Järvi S, Suorsa M, Aro EM (2015) Photosystem II repair in plant chloroplasts: regulation, assisting proteins and shared components with photosystem II biogenesis. Biochim Biophys Acta Bioenergy 1847(9):900–909. https://doi.org/10.1016/j.bbabio.2015.01.006

Kalaji HM, Schansker G, Brestic M et al (2017) Frequently asked questions about chlorophyll fluorescence, the sequel. Photosynth Res 132:13–66. https://doi.org/10.1007/s11120-016-0318-y

Khandaker MM, Majrashi A, Boyce AN (2015) The influence of gibberellic acid on the chlorophyll fluorescence, protein content and PAL activity of wax apple (Syzygium samarangense var. jambu madu) fruits. Aust J Crop Sci 9(12):1221–1227

Kim T-W, Wang Z-Y (2010) Brassinosteroid signal transduction from receptor kinases to transcription factors. Annu Rev Plant Biol 61:681–704. https://doi.org/10.1146/annurev.arplant.043008.092057

Kim MH, Kim Y, Kim JW et al (2013) Identification of Arabidopsis BAK1-associating receptor-Like kinase 1 (BARK1) and characterization of its gene expression and brassinosteroid-regulated root phenotypes. Plant Cell Physiol 54(10):1620–1634. https://doi.org/10.1093/pcp/pct106

Kim D, Langmead B, Salzberg SL (2015) HISAT: a fast spliced aligner with low memory requirements. Nat Methods 12(4):357–360. https://doi.org/10.1038/nmeth.3317

Koka CV, Cerny RE, Gardner RG et al (2000) A putative role for the tomato genes DUMPY and CURL-3 in brassinosteroid biosynthesis and response. Plant Physiol 122(1):85–98. https://doi.org/10.1104/pp.122.1.85

Li J (2013) Brassinosteroids. In: Brenner’s encyclopedia of genetics: second edition, pp 19–20

Liao Y, Smyth GK, Shi W (2014) FeatureCounts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics 30(7):923–30. https://doi.org/10.1093/bioinformatics/btt656

Long SP, Zhu XG, Naidu SL, Ort DR (2006) Can improvement in photosynthesis increase crop yields? Plant Cell Environ 29:315–330. https://doi.org/10.1111/j.1365-3040.2005.01493.x

Montoya T, Nomura T, Farrar K et al (2002) Cloning the tomato Curl3 gene highlights the putative dual role of the leucine-rich repeat receptor kinase tBRI1/SR160 in plant steroid hormone and peptide hormone signaling. Plant Cell 14(12):3163–3176. https://doi.org/10.1105/tpc.006379

Morinaka Y, Sakamoto T, Inukai Y et al (2006) Morphological alteration caused by brassinosteroid insensitivity increases the biomass and grain production of rice. Plant Physiol 141(3):924–931. https://doi.org/10.1104/pp.106.077081

Morita R, Sato Y, Masuda Y et al (2009) Defect in non-yellow coloring 3, an α/β hydrolase-fold family protein, causes a stay-green phenotype during leaf senescence in rice. Plant J 59:940–952. https://doi.org/10.1111/j.1365-313X.2009.03919.x

Nie S, Huang S, Wang S et al (2017) Enhancing brassinosteroid signaling via overexpression of tomato (Solanum lycopersicum) SlBRI1 improves major agronomic traits. Front Plant Sci 8:1386. https://doi.org/10.3389/fpls.2017.01386

Nolan T, Chen J, Yin Y (2017) Cross-talk of Brassinosteroid signaling in controlling growth and stress responses. Biochem J 474(16):2641–2661. https://doi.org/10.1042/BCJ20160633

Shi L, Shi Y, Zhang Y, Liao X (2019) A systemic study of indoxacarb resistance in Spodoptera litura revealed complex expression profiles and regulatory mechanism. Sci Rep 9:14997. https://doi.org/10.1038/s41598-019-51234-5

Tang Y, Wen X, Lu C (2005) Differential changes in degradation of chlorophyll-protein complexes of photosystem I and photosystem II during flag leaf senescence of rice. Plant Physiol 43:193–201. Biochem. https://doi.org/10.1016/j.plaphy.2004.12.009

Tanveer M, Shahzad B, Sharma A et al (2018) 24-Epibrassinolide; an active brassinolide and its role in salt stress tolerance in plants: a review. Plant Physiol 130:69–79. https://doi.org/10.1016/j.plaphy.2018.06.035

Vert G, Nemhauser JL, Geldner N et al (2005) Molecular mechanisms of steroid hormone signaling in plants. Annu Rev Cell Dev Biol 21:177–201. https://doi.org/10.1146/annurev.cellbio.21.090704.151241

Vilarrasa-Blasi J, González-García MP, Frigola D et al (2014) Regulation of plant stem cell quiescence by a brassinosteroid signaling module. Dev Cell 30:36–47. https://doi.org/10.1016/j.devcel.2014.05.020

Voitsekhovskaja OV, Tyutereva EV (2015) Chlorophyll b in angiosperms: functions in photosynthesis, signaling and ontogenetic regulation. J Plant Physiol 189:51–64. https://doi.org/10.1016/j.jplph.2015.09.013

Wang S, Liu J, Zhao T et al (2019) Modification of threonine-1050 of SlBri1 regulates BR signalling and increases fruit yield of tomato. BMC Plant Biol 19(1):256. https://doi.org/10.1186/s12870-019-1869-9

Xia XJ, Huang LF, Zhou YH et al (2009) Brassinosteroids promote photosynthesis and growth by enhancing activation of Rubisco and expression of photosynthetic genes in Cucumis sativus. Planta 230(6):1185–1196. https://doi.org/10.1007/s00425-009-1016-1

Zhang Y, Shi Y, Gong H, jun et al (2018) Beneficial effects of silicon on photosynthesis of tomato seedlings under water stress. J Integr Agric 7:2151–2159. https://doi.org/10.1016/S2095-3119(18)62038-6

Zheng L, Gao C, Zhao C et al (2019) Effects of brassinosteroid associated with auxin and gibberellin on apple tree growth and gene expression patterns. Hortic Plant J 5(3):93–108. https://doi.org/10.1016/j.hpj.2019.04.006