Allelic variants of polymorphic genes associated with a higher frequency of chromosome aberrations

Russian Journal of Genetics - Tập 47 - Trang 1364-1371 - 2011
L. E. Sal’nikova1, A. G. Chumachenko1, N. Sh. Lapteva1, I. N. Vesnina1, G. I. Kuznetsova1, A. V. Rubanovich1
1Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia

Tóm tắt

Genotypic associations were studied for the frequency of chromosome aberrations in human peripheral blood lymphocytes. Cytogenetic analysis (1000 metaphase plate per individual) and genotyping at 19 sites of genes involved in detoxification and DNA repair were performed in a sample of 83 Chernobyl liquidators and a matched control sample of 96 volunteers. In either sample, the frequency of chromosome aberrations was higher in carriers of the minor alleles of the XPD gene (sites 2251T > G and 862G > A) and the positive genotypes of the GSTM1-GSTT1 genes. The highest frequency of chromosome aberrations was observed in carriers of a combined genotype including at least one minor allele of the XPD sites + at least one insertion in the GSTM1-GSTT1 genes. The high-risk genotype, which had a prevalence of 64%, was strongly associated with a higher frequency of chromosome aberrations in both volunteers (OR = 6.9, p = 0.008) and Chernobyl liquidators (OR = 5.6, p = 0.002).

Tài liệu tham khảo

Dinamika populyatsionnykh genofondov pri antropogennykh vozdeistviyakh (Dynamics of Population Gene Pools under Anthropogenic Impact), Altukhov, Yu.P., Ed., Moscow: Nauka, 2004. Altukhov, Yu.P., Population Genetics: Diversity and Stability, London: Harwood, 1990. Sal’nikova, L.E., Fomin, D.K., Elisova, T.V., et al., Genotype Dependence of Cytogenetic and Epidemiological Characteristics in the Liquidators of the Accident at the ChNPP, Radiat. Biol. Radioekol., 2008, vol. 48, no. 3, pp. 303–312. Hamajima, N., PCR-CTPP: A New Genotyping Technique in the Era of Genetic Epidemiology, Exp. Rev. Mol. Diagnosis, 2001, vol. 1, no. 1, pp. 119–123. Fawcett, T., An Introduction to ROC Analysis, Pattern Recognition Lett., 2006, vol. 27, pp. 861–874. Lloyd, D.C., Purrott, R.J., and Reeder, E.J., The Incidence of Unstable Aberrations in Peripheral Blood Lymphocytes from Unirradiated and Occupationally Exposed People, Mutat. Res., 1980, vol. 72, pp. 523–532. Bender, M.A., Awa, A.A., Brooks, A.L., et al., Current Status of Cytogenetic Procedures to Detect and Quantify Previous Exposures to Radiation, Mutat. Res., 1988, vol. 196, pp. 103–159. Sevan’kaev, A.V., Potetnya, O.I., Mikhailova, G.F., et al., Chromosomal Aberration Frequencies in Peripheral Blood Lymphocytes among Population of Orlov Region, Inhabiting Contaminated with Radionuclides Territories after Chernobyl Accident, Radiat. Risk, 2003, special issue, pp. 87–95. Ainsburya, E.A., Livingstonb, G.K., Abbottb, M.G., et al., Interlaboratory Variation in Scoring Dicentric Chromosomes in a Case of Partial-Body X-Ray Exposure: Implications for Biodosimetry Networking and Cytogenetic “Triage Mode” Scoring, Radiat. Res., 2009, vol. 172, no. 6, pp. 746–752. Baranov, V.S., Genomics on the Way to Predictive Medicine, Acta Naturae, 2009, no. 3, pp. 77–88. Vodicka, P., Kumar, R., Stetina, R., et al., Genetic Polymorphisms in DNA Repair Genes and Possible Links with DNA Repair Rates, Chromosomal Aberrations and Single-Strand Breaks in DNA, Carcinogenesis, 2004, vol. 25, no. 50, pp. 757–763. Au, W.W., Salama, A.S., and Sierra-Torres, C.H., Functional Characterization of Polymorphisms in DNA Repair Genes Using Cytogenetic Challenge Assays, Environ. Health Perspect., 2003, vol. 111, pp. 1843–1850. Monaco, R., Rosal, R., Dolan, M.A., et al., Conformational Effects of a Common Codon 751 Polymorphism on the C-Terminal Domain of the Xeroderma Pigmentosum D Protein, J. Carcinogenesis, 2009, vol. 8, p. 12, Available from: http://www.ncbi.nlm.nih/gov/pmc/articles/PMC2799167/pdf/JC-08-54918.pdf/?tool=pmcentres Spitz, M.R., Wu, X., Wang, Y., et al., Modulation of Nucleotide Excision Repair Capacity by XPD Polymorphisms in Lung Cancer Patients, Cancer Res., 2001, vol. 61, pp. 1354–1357. Musak, L., Polakova, V., Halasova, E., et al., Effect of Occupational Exposure to Cytostatics and Nucleotide Excision Repair Polymorphism on Chromosomal Aberrations Frequency, Interdiscip. Toxicol., 2009, vol. 2, no. 1, pp. 13–17. Kiuru, A., Lindholm, C., Heilimo, I., et al., Influence of DNA Repair Gene Polymorphisms on the Yield of Chromosomal Aberrations, Environ. Mol. Mutagen, 2005, vol. 46, no. 3, pp. 198–205. Skjelbred, C.F., Svendsen, M., Haugan, V., et al., Influence of DNA Repair Gene Polymorphisms of HOGG1, XRCC1, XRCC3, ERCC2 and the Folate Metabolism Gene MTHFR on Chromosomal Aberration Frequencies, Mutat. Res., 2006, vol. 602, nos. 1-2, pp. 151–162. Hoeijmakers, J.H., Genome Maintenance Mechanisms for Preventing Cancer, Nature, 2001, vol. 411, pp. 366–374. Zhang, Y., Rohde, L.H., and Wu, H., Involvement of Nucleotide Excision and Mismatch Repair Mechanisms in Double Strand Break Repair, Curr. Genomics, 2009, vol. 10, no. 4, pp. 250–258. Dalhus, B., Laerdahl, J.K., Backe, P.H., and Bjoras, M., DNA Base Repair-Recognition and Initiation of Catalysis, FEMS Microbiol. Rev., 2009, vol. 33, no. 6, pp. 1044–1078. Zharkov, D.O., Base Excision DNA Repair, Cell Mol. Life Sci., 2008, vol. 65, no. 10, pp. 1544–1565. Dogliotti, E., Fortini, P., Pascucci, B., and Parlanti, E., The Mechanism of Switching among Multiple BER Pathways, Prog. Nucleic Acid Res. Mol. Biol., 2001, vol. 68, pp. 3–27. Conde, C., Mark, M., Oliver, F.J., et al., Loss of Poly(ADP-Ribose) Polymerase-1 Causes Increased Tumor Latency in p53-Deficient Mice, EMBO J., 2001, vol. 20, pp. 3535–3543. Tong, W.M., Yang, Y.G., Cao, W.H., et al., Poly(ADP-Ribose) Polymerase-1 Plays a Role in Suppressing Mammary Tumorigenesis in Mice, Oncogene, 2007, vol. 26, pp. 3857–3867. Underhill, C., Toulmonde, M., and Bonnefoi, H., A Review of PARP Inhibitors: From Bench to Bedside, Ann. Oncol., 2011, vol. 22, no. 2, pp. 268–279. Lindahl, T., Instability and Decay of the Primary Structure of DNA, Nature, 1993, vol. 362, pp. 709–715. Gillet, L.C. and Schaerer, O.D., Molecular Mechanisms of Mammalian Global Genome Nucleotide Excision Repair, Chem. Rev., 2006, vol. 106, no. 2, pp. 253–276. Cai, Y., Patel, D.J., Broyde, S., and Geacintov, N.E., Base Sequence Context Effects on Nucleotide Excision Repair, J. Nucleic Acids, 2010; 2010. Cameroni, E., Stettler, K., and Suter, B., On the Traces of XPD: Cell Cycle Matters-Untangling the Genotype-Phenotype Relationship of XPD Mutations, Cell Div., 2010, vol. 15, no. 5, p. 24. Sram, R.J., Roessner, P., Rubes, J., et al., Possible Genetic Damage in the Czech Nuclear Power Plant Workers, Mutat. Res., 2006, vol. 593, nos. 1-2, pp. 50–63. Vasil’eva, Z.Zh., Bersimbaev, R.I., Bekmanov, B.O., and Vorobtsova, I.E., Relation of Polymorphism of GSTM1 and GSTT1 Genes to Quantitative Level of Cytogenetic Aberrations in Uranic Manufacture Workers, Radiat. Biol. Radioekol., 2010, vol. 50, no. 2, pp. 148–152. Iarmarcovai, G., Sari-Minodier, I., Orsiere, T., et al., A Combined Analysis of XRCC1, XRCC3, GSTM1, and GSTT1 Polymorphisms and Centromere Content of Micronuclei in Welders, Mutagenesis, 2006, vol. 21, no. 2, pp. 159–165. Reszka, E., Wasowicz, W., and Gromadzinska, J., Antioxidant Defense Markers Modulated by Glutathione S-Transferase Genetic Polymorphism: Results of Lung Cancer Case-Control Study, Genes Nutr., 2007, vol. 2, pp. 287–294. Hayes, J.D. and Strange, R.C., Glutathione S-Transferase Polymorphisms and Their Biological Consequences, Pharmacology, 2000, vol. 61, no. 3, pp. 154–166. Kirsch-Volders, M., Mateuca, R.A., Roelants, M., et al., The Effects of GSTM1 and GSTT1 Polymorphisms on Micronucleus Frequencies in Human Lymphocytes in vivo, Cancer Epidemiol. Biomarkers Prev., 2006, vol. 15, pp. 1038–1042. Dorion, S., Lambert, H., and Landry, J., Activation of the 38 Signaling Pathway by Heat Shock Involves the Dissociation of Glutathione S-Transferase Mu from Ask1, J. Biol. Chem., 2002, vol. 277, no. 34, pp. 30792–30797. Godschalk, R.W., Ostertag, J.U., Zandsteeg, A.M., et al., Impact of GSTM1 on Aromatic-DNA Adducts and p53 Accumulation in Human Skin and Lymphocytes, Pharmacogenetics, 2001, vol. 11, no. 6, pp. 537–543.