Allele specific LAMP- gold nanoparticle for characterization of single nucleotide polymorphisms

Bell, 2004, Predicting disease using genomics, Nature, 429, 453, 10.1038/nature02624 Goldstein, 2009, Common genetic variation and human traits, N. Engl. J. Med., 360, 1696, 10.1056/NEJMp0806284 Enattah, 2002, Identification of a variant associated with adult-type hypolactasia, Nat. Genet., 30, 233, 10.1038/ng826 Bersaglieri, 2004, Genetic signatures of strong recent positive selection at the lactase gene, Am. J. Hum. Genet., 74, 1111, 10.1086/421051 Mattar, 2012, Lactose intolerance: Diagnosis, genetic, and clinical factors, Clin Exp Gastroenterol., 5, 113, 10.2147/CEG.S32368 Chen, 2003, Single nucleotide polymorphism genotyping: biochemistry, protocol, cost and throughput, Pharmacogenom. J., 3, 77, 10.1038/sj.tpj.6500167 Sachidanandam, 2001, A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms, Nature, 409, 928, 10.1038/35057149 Notomi, 2000, Loop-mediated isothermal amplification of DNA, Nucleic Acids Res., 28, E63, 10.1093/nar/28.12.e63 Badolo, 2012, Development of an allele-specific, loop-mediated, isothermal amplification method (AS-LAMP) to detect the L1014F kdr-w mutation in Anopheles gambiae s. l, Malar. J., 11, 227, 10.1186/1475-2875-11-227 Rashwan, 2016, Isothermal diagnostic assays for monitoring single nucleotide polymorphisms in necator americanus associated with benzimidazole drug resistance, PLoS Negl. Trop. Dis., 10, 1, 10.1371/journal.pntd.0005113 Zhang, 2016, Establishment and application of a real-time loop-mediated isothermal amplification system for the detection of CYP2C19 polymorphisms, Sci. Rep., 6, 1 Ayukawa, 2017, Novel loop-mediated isothermal amplification (LAMP) assay with a universal QProbe can detect SNPs determining races in plant pathogenic fungi, Sci. Rep., 7, 1, 10.1038/s41598-017-04084-y Doria, 2012, Noble metal nanoparticles for biosensing applications, Sensors (Basel), 12, 1657, 10.3390/s120201657 Veigas, 2014, AuNPs for identification of molecular signatures of resistance, Front. Microbiol., 5, 455 Larguinho, 2012, Gold and silver nanoparticles for clinical diagnostics – From genomics to proteomics, J. Proteomics, 75, 2811, 10.1016/j.jprot.2011.11.007 Cordeiro, 2016, BioCode gold-nanobeacon for the detection of fusion transcripts causing chronic myeloid leukemia, J. Nanobiotechnol., 14, 38, 10.1186/s12951-016-0192-y Veigas, 2013, Isothermal DNA amplification coupled to Au-nanoprobes for detection of mutations associated to Rifampicin resistance in Mycobacterium tuberculosis, J. Nanobiotechnol., 11, 38, 10.1186/1477-3155-11-38 Carlos, 2014, Characterization of genomic single nucleotide polymorphism via colorimetric detection using a single gold nanoprobe, Anal. Biochem., 465, 1, 10.1016/j.ab.2014.07.019 Vinhas, 2016, Colorimetric assessment of BCR-ABL1 transcripts in clinical samples via gold nanoprobes, Anal. Bioanal. Chem., 408, 5277, 10.1007/s00216-016-9622-9 Lee, 1982, Adsorption and surface-enhanced Raman of dyes on silver and gold sols, J. Phys. Chem., 86, 3391, 10.1021/j100214a025 Zhu, 1996, Addition of a competitive primer can dramatically improve the specificity of PCR amplification of specific alleles, Biotechniques, 21, 586, 10.2144/96214bm04 Little, 2001, Amplification-refractory mutation system (ARMS) analysis of point mutations Veigas, 2015, One nanoprobe, two pathogens: gold nanoprobes multiplexing for point-of-care, J. Nanobiotechnol., 13, 48, 10.1186/s12951-015-0109-1