A two-transcript biomarker of host classifier genes for discrimination of bacterial from viral infection in acute febrile illness: a multicentre discovery and validation study
Tài liệu tham khảo
Kapasi, 2016, Host biomarkers for distinguishing bacterial from non-bacterial causes of acute febrile illness: a comprehensive review, PLoS One, 11, 10.1371/journal.pone.0160278
Crump, 2011, Management of adolescents and adults with febrile illness in resource limited areas, BMJ, 343, 10.1136/bmj.d4847
Jain, 2015, Community-acquired pneumonia requiring hospitalization among US adults, N Engl J Med, 373, 415, 10.1056/NEJMoa1500245
Yan, 2016, Metagenomic analysis of sputum microbiome as a tool toward culture-independent pathogen detection of patients with ventilator-associated pneumonia, Am J Respir Crit Care Med, 194, 636, 10.1164/rccm.201601-0034LE
Rook, 2017, Evolution, human-microbe interactions, and life history plasticity, Lancet, 390, 521, 10.1016/S0140-6736(17)30566-4
Brink, 2016, Antimicrobial stewardship across 47 South African hospitals: an implementation study, Lancet Infect Dis, 16, 1017, 10.1016/S1473-3099(16)30012-3
Mahajan, 2016, Association of RNA biosignatures with bacterial infections in febrile infants aged 60 days or younger, JAMA, 316, 846, 10.1001/jama.2016.9207
Hu, 2013, Gene expression profiles in febrile children with defined viral and bacterial infection, Proc Natl Acad Sci USA, 110, 12792, 10.1073/pnas.1302968110
Sweeney, 2016, Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis, Lancet Respir Med, 4, 213, 10.1016/S2213-2600(16)00048-5
Mejias, 2013, Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection, PLoS Med, 10, 10.1371/journal.pmed.1001549
Gliddon, 2018, Genome-wide host RNA signatures of infectious diseases: discovery and clinical translation, Immunology, 153, 171, 10.1111/imm.12841
Herberg, 2016, Diagnostic test accuracy of a 2-transcript host RNA signature for discriminating bacterial vs viral infection in febrile children, JAMA, 316, 835, 10.1001/jama.2016.11236
Bhattacharya, 2017, Transcriptomic biomarkers to discriminate bacterial from nonbacterial infection in adults hospitalized with respiratory illness, Sci Rep, 7, 10.1038/s41598-017-06738-3
Chang, 2002, Training nu-support vector regression: theory and algorithms, Neural Comput, 14, 1959, 10.1162/089976602760128081
Youden, 1950, Index for rating diagnostic tests, Cancer, 3, 32, 10.1002/1097-0142(1950)3:1<32::AID-CNCR2820030106>3.0.CO;2-3
Newcombe, 1998, Two-sided confidence intervals for the single proportion: comparison of seven methods, Stat Med, 17, 857, 10.1002/(SICI)1097-0258(19980430)17:8<857::AID-SIM777>3.0.CO;2-E
DeLong, 1988, Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach, Biometrics, 44, 837, 10.2307/2531595
van Houten, 2017, A host-protein based assay to differentiate between bacterial and viral infections in preschool children (OPPORTUNITY): a double-blind, multicentre, validation study, Lancet Infect Dis, 17, 431, 10.1016/S1473-3099(16)30519-9
Oved, 2015, A novel host-proteome signature for distinguishing between acute bacterial and viral infections, PLoS One, 10, 10.1371/journal.pone.0120012
Meng, 2015, EPSTI1 is involved in IL-28A-mediated inhibition of HCV infection, Mediators Inflamm, 2015, 10.1155/2015/716315
Baranger, 2008, The antibacterial and antifungal properties of trappin-2 (pre-elafin) do not depend on its protease inhibitory function, FEBS J, 275, 2008, 10.1111/j.1742-4658.2008.06355.x
Roghanian, 2006, The antimicrobial/elastase inhibitor elafin regulates lung dendritic cells and adaptive immunity, Am J Respir Cell Mol Biol, 34, 634, 10.1165/rcmb.2005-0405OC
Havers, 2018, Outpatient antibiotic prescribing for acute respiratory infections during influenza seasons, JAMA Netw Open, 1, 10.1001/jamanetworkopen.2018.0243
Mullard, 2016, Tackling antimicrobial drug resistance, Nat Rev Drug Discov, 15, 375
ten Oever, 2016, Utility of immune response-derived biomarkers in the differential diagnosis of inflammatory disorders, J Infect, 72, 1, 10.1016/j.jinf.2015.09.007
Tsalik, 2018, New molecular diagnostic approaches to bacterial infections and antibacterial resistance, Annu Rev Med, 69, 379, 10.1146/annurev-med-052716-030320
Cardoso, 2016, 70-gene signature as an aid to treatment decisions in early-stage breast cancer, N Engl J Med, 375, 717, 10.1056/NEJMoa1602253
Crespo-Leiro, 2015, Performance of gene-expression profiling test score variability to predict future clinical events in heart transplant recipients, BMC Cardiovasc Disord, 15, 120, 10.1186/s12872-015-0106-1
Liew, 2006, The peripheral blood transcriptome dynamically reflects system wide biology: a potential diagnostic tool, J Lab Clin Med, 147, 126, 10.1016/j.lab.2005.10.005
Holcomb, 2017, Host-based peripheral blood gene expression analysis for diagnosis of infectious diseases, J Clin Microbiol, 55, 360, 10.1128/JCM.01057-16
