A polyphasic approach to delineate species in Bipolaris

Springer Science and Business Media LLC - Tập 102 - Trang 225-256 - 2020
Chitrabhanu S. Bhunjun1,2,3, Yang Dong4, Ruvishika S. Jayawardena2, Rajesh Jeewon5, Chayanard Phukhamsakda2, Digvijayini Bundhun2,6, Kevin D. Hyde1,7,8, Jun Sheng1,4
1State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, People’s Republic of China
2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
3School of Science, Mae Fah Luang University, Chiang Rai, Thailand
4Yunnan Research Institute for Local Plateau Agriculture and Industry, Kunming, People’s Republic of China
5Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius
6Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
7Institute of Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, People's Republic of China
8Centre for Mountain Futures, Kunming Institute of Botany, Kunming, People’s Republic of China

Tóm tắt

Bipolaris species are important plant pathogens with a worldwide distribution in tropical and temperate environments. Species recognition in Bipolaris has been problematic due to a lack of molecular data from ex-type cultures, the use of few gene regions for species resolution and overlapping morphological characters. In this study, we evaluate the efficiency of different DNA barcodes in species delimitation in Bipolaris by phylogenetic analyses, Automatic Barcode Gap Discovery and Objective Clustering. GAPDH is determined to be the best single marker for the genus. These approaches are used to clarify the taxonomic placement of all sequences currently named as Bipolaris in GenBank based on ITS and GAPDH gene sequence data. In checking various publications, we found that the majority of new host records of fungal species published in the Plant Disease journal from 2010 to 2019 were based on BLAST searches of the ITS sequences and up to 82% of those records could be erroneous. Therefore, relying on BLAST searches from GenBank to name species is not recommended. Editorial boards of journals and reviewers of new record papers should be aware of this problem. In naming Bipolaris species, whether new or known, it is recommended to perform phylogenetic analyses based on GAPDH using the correct taxon sampling for accurate results and the species relationship should have reliable statistical support. At least two new species are represented by molecular data in GenBank and we provide an updated taxonomic revision of Bipolaris. We accept 45 species in Bipolaris and notes are provided for all the species including hosts and geographic distribution.

Tài liệu tham khảo

Ahmadpour A, Heidarian Z, Donyadoost-Chelan M, Javan-Nikkhah M, Tsukiboshi T (2012) A new species of Bipolaris from Iran. Mycotaxon 120:301–307 Alcorn JL (1982) New Cochliobolus and Bipolaris species. Mycotaxon 15:1–19 Alcorn JL (1983) Generic concepts of Drechslera, Bipolaris and Exserohilum. Mycotaxon 17:1–86 Alcorn JL (1990) Additions to Cochliobolus, Bipolaris and Curvularia. Mycotaxon 39:361–392 Alcorn JL (1991) New combinations and synonymy in Bipolaris and Curvularia, and a new species of Exserohilum. Mycotaxon 41:329–343 Amaradasa BS, Amundsen K (2014) First report of Curvularia inaequalis and Bipolaris spicifera causing leaf blight of buffalograss in Nebraska. Am Phytopathol Soc 98:279 Amaradasa BS, Madrid H, Groenewald JZ, Crous PW, Amundsen K (2014) Porocercospora seminalis gen. et comb. nov., the causal organism of buffalograss false smut. Mycologia 106:77–85 Berbee ML, Pirseyedi M, Hubbard S (1999) Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia 91:964–977 Berbee ML, Carmean DA, Winka K (2000) Ribosomal DNA and resolution of branching order among the ascomycota: how many nucleotides are enough? Mol Phylogenet Evol 17:337–344 Bernardi C, Rey MS, Busso C, Campos T, Mazaro SM, Borin RC, Vismara L, Zanella MG, Haas J, de Farias CRJ, Barros D (2018) First report of Bipolaris secalis causing disease on Jangada Brava (Heliocarpus americanus) seeds in Brazil. Plant Dis 102:1034 Boedijn KB (1933) Ueber einige phragmosporen Dematiazeen. Ann Jard Bot Buitenzorg 13:120–134 Bruckart WL III, Eskandari FM, Lane WA (2014) First report of leaf necrosis on Microstegium vimineum caused by Bipolaris microstegii in Maryland. Plant Dis 98:852 Butler EJ, Khan AH (1913) Some new sugarcane diseases. Mem Dept Agric India Bot Ser 6:181–208 Cai L, Giraud T, Zhang N, Begerow D, Cai G, Shivas RG (2011) The evolution of species concepts and species recognition criteria in plant pathogenic fungi. Fungal Divers 50:121–133 Herbarium Catalogue (2016) Royal Botanic Gardens, Kew. https://www.herbimi.info/herbimi/home.htm Chamorro M, Mertely JC, Seijo TE, Peres NA (2016) First report of Bipolaris drechsleri causing a leaf spot of Cuphea llavea in Florida. Plant Dis 100:1502 Chang HS (1992) Cochliobolus zeae sp. nov., the teleomorph of Bipolaris zeae. Bot Bull Acad Sin 33:175–177 Cholil A, de Hoog GS (1982) Variability in Drechslera oryzae. Trans Br Mycol Soc 79:491–496 Christensen JJ (1926) Physiologic specialization and parasitism of Helminthosporium sativum. Tech Bull Agric Exp Stn Univ Minn 37:1–101 Christiansen SK, Wirsel S, Yun SH, Yoder OC, Turgeon BG (1998) The two Cochliobolus mating type genes are conserved among species but one of them is missing in C. victoriae. Mycol Res 102:919–929 Crous PW, Shivas RG, Wingfield MJ, Summerell BA, Rossman AY, Alves JL, Adams GC, Barreto RW, Bell A, Coutinho ML, Flory SL, Gates G, Grice KR, Hardy GESTJ, Kleczewski NM, Lombard L, Longa CMO, Louis-Seize G, Macedo F, Mahoney DP, Maresi G, Martin-Sanchez PM, Marvanová L, Minnis AM, Morgado LN, Noordeloos ME, Phillips AJL, Quaedvlieg W, Ryan PG, Saiz-Jimenez C, Seifert KA, Swart WJ, Tan YP, Tanney JB, Thu PQ, Videira SIR, Walker DM, Groenewald JZ (2012) Fungal Planet description sheets:128–153. Persoonia 29:146–201 Ding RY, Huang Q, Zhang Q, Wu Y, Reardon RC, Qiang S (2018) First report of leaf spot disease on Microstegium vimineum caused by Bipolaris panici-miliacei in China. Plant Dis 102:1660 Dughaishi S, Maharachchikumbura SS, Al-Sadi A (2018) Bipolaris omanensis, a novel saprobic species of Bipolaris from Oman based on morphology and sequence data. Phytotaxa 385:23–30 Ellis MB (1971) Dematiaceous Hyphomycetes. Commonwealth Mycological Institute, Kew Faris JA (1928) Three Helminthosporium diseases of sugar cane. Phytopathology 18:753–774 Farr DF, Rossman AY (2020) Fungal databases, Systematic mycology and microbiology laboratory, ARS, USDA. https://nt.ars-grin.gov/fungaldatabases/ Fetch TG Jr, Steffenson BJ (1994) Identification of Cochliobolus sativus isolates expressing differential virulence on two-row barley genotypes from North Dakota. Can J Plant Pathol 16:202–206 Index Fungorum (2019) https://www.indexfungorum.org/names/names.asp Garibaldi A, Bertetti D, Pensa P, Poli A, Gullino ML (2014) First report of stem rot on Cereus peruvianus monstruosus caused by Bipolaris cactivora (Petr.) Alcorn in Italy. Plant Dis 98:159 Garibaldi A, Bertetti D, Pensa P, Matić S, Gullino ML (2019) First report of stem rot caused by Bipolaris cactivora on Echinocereus rigidissimus subsp. rubispinus in Italy. Plant Dis 103:1033 Gasparetto BF, Franke LB, Andrade CCL, Dalbosco M, Duarte V, Moreira SI, Alves E (2017) First report of Bipolaris micropus, Curvularia geniculata, Epicoccum sorghinum, and Fusarium incarnatum on Paspalum guenoarum seeds in Rio Grande do Sul, Brazil. Plant Dis 101:1679 Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98 Hawksworth DL (2011) A new dawn for the naming of fungi: impacts of decisions made in Melbourne in July 2011 on the future publication and regulation of fungal names. IMA Fungus 2:155–162 Hawlitschek O, Nagy ZT, Berger J, Glaw F (2013) Reliable DNA barcoding performance proved for species and island populations of comoran squamate reptiles. PLoS ONE 8:e73368 Hendrich L, Pons J, Ribera I, Balke M (2010) Mitochondrial cox1 sequence data reliably uncover patterns of insect diversity but suffer from high lineage-idiosyncratic error rates. PLoS One 5:e14448 Hongsanan S, Hyde KD, Phookamsak R, Wanasinghe DN, Mckenzie E, Sarma VV, Boonmee S, Lücking R, Pem D, Bhat DJ, Liu N, Tennakoon DS, Karunarathna A, Jiang SH, Wei JC, Jones EBG, Phillips AJL, Manawasinghe I, Tibpromma S, Jayasiri SC, Sandamali D, Jayawardena RS, Wijayawardene NN, Ekanayaka AH, Jeewon R, Lu YZ, Dissanayake AJ, Zeng XY, Luo Z, Tian Q, Phukhamsakda C, Thambugala KM, Dai D, Chethana KWT, Ertz D, Pérez-Ortega P, Suija A, Doilom M, Senwanna C, Wijesinghe NS, Konta S, Niranjan M, Zhang S, Ariyawansa HA, Jiang HB, Zhang JF, de Silva NI, Thiyagaraja V, Zhang H, Bezerra JDP, Miranda-Gonzáles R, Aptroot A, Kashiwadani H, Harishchandra D, Aluthmuhandiram JVS, Abeywickrama PD, Bao DF, Devadatha B, Wu HX, Moon KH, Gueidan C, Schumm F, Bundhun D, Mapook A, Monkai J, Chomnunti P, Samarakoon MC, Suetrong S, Chaiwan N, Dayarathne M, Jing Y, Achala R, Bhunjun CS, Zheng J, Liu G, Feng Y, Xie N (2020) Refined families of Dothideomycetes. Fungal Divers (in press) Huang Q, Ding RY, Zhang Q, Wu Y, Reardon RC, Qiang S (2017) The first report of leaf blight disease on Microstegium vimineum caused by Bipolaris maydis in China. Plant Dis 101:1680 Huang L, Zhu YN, Yang JY, Li DW, Li Y, Bian LM, Ye JR (2018) Shoot blight on Chinese fir (Cunninghamia lanceolata) is caused by Bipolaris oryzae. Plant Dis 102:500–506 Hyde KD, Abd-Elsalam K, Cai L (2010) Morphology: still essential in a molecular world. Mycotaxon 114:439–451 Hyde KD, Nilsson RH, Alias SA, Ariyawansa HA, Blair JE, Cai L, de Cock AWAM, Dissanayake AJ, Glockling SL, Goonasekara ID, Gorczak M, Hahn M, Jayawardena RS, van Kan JAL, Laurence MH, Lévesque CA, Li X, Liu J-K, Maharachchikumbura SSN, Manamgoda DS, Martin FN, McKenzie EHC, McTaggart AR, Mortimer PE, Nair PVR, Pawłowska J, Rintoul TL, Shivas RG, Spies CFJ, Summerell BA, Taylor PWJ, Terhem RB, Udayanga D, Vaghefi N, Walther G, Wilk M, Wrzosek M, Xu J-C, Yan JY, Zhou N (2014) One stop shop: backbones trees for important phytopathogenic genera: I. Fungal Divers 67:21–125 Hyde KD, Tennakoon DS, Jeewon R, Bhat DJ, Maharachchikumbura SSN, Rossi W, Leonardi M, Lee HB, Mun HY, Houbraken J, Nguyen TTT, Jeon SJ, Frisvad JC, Wanasinghe DN, Luücking R, Aptroot A, Cáceres MES, Karunarathna SC, Hongsanan S, Phookamsak R, de Silva NI, Thambugala KM, Jayawardena RS, Senanayake IC, Boonmee S, Chen J, Luo ZL, Phukhamsakda C, Pereira OL, Abreu VP, Rosado AWC, Bart B, Randrianjohany E, Hofstetter V, Gibertoni TB, da Silva Soares AM, Plautz HL Jr, Sotão HMP, Xavier WKS, Bezerra JDP, de Oliveira TGL, de Souza-Motta CM, Magalhães OMC, Bundhun D, Harishchandra D, Manawasinghe IS, Dong W, Zhang SN, Bao DF, Samarakoon MC, Pem D, Karunarathna A, Lin CG, Yang J, Perera RH, Kumar V, Huang SK, Dayarathne MC, Ekanayaka AH, Jayasiri SC, Xiao YP, Konta S, Niskanen T, Liimatainen K, Dai YC, Ji XH, Tian XM, Mešić A, Singh SK, Phutthacharoen K, Cai L, Sorvongxay T, Thiyagaraja V, Norphanphoun C, Chaiwan N, Lu YZ, Jiang HB, Zhang JF, Abeywickrama PD, Aluthmuhandiram JVS, Brahmanage RS, Zeng M, Chethana T, Wei DP, Réblová M, Fournier J, Nekvindová J, Barbosa R, dos Santos JEF, de Oliveira NT, Li GJ, Ertz D, Shang QJ, Phillips AJL, Kuo CH, Camporesi E, Bulgakov TS, Lumyong S, Jones EBG, Chomnunti P, Gentekaki E, Bungartz F, Zeng XY, Fryar S, Tkalčec Z, Liang J, Li GS, Wen TC, Singh PN, Gafforov Y, Promputtha I, Yasanthika E, Goonasekara ID, Zhao RL (2019) Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers 96:1–242 Jayawardena RS, Hyde KD, Chethana KWT, Daranagama DA, Dissanayake AJ, Goonasekara ID, Manawasinghe IS, Mapook A, Jayasiri SC, Karunarathna A, Li CG, Phukhamsakda C, Senanayake IC, Wanasinghe DN, Camporesi E, Bulgakov TS, Li XH, Liu M, Zhang W, Yan JY (2018) Mycosphere notes 102–168: saprotrophic fungi on Vitis in China, Italy, Russia and Thailand. Mycosphere 9:1–114 Jayawardena RS, Hyde KD, Jeewon R, Ghobad-Nejhad M, Wanasinghe DN, Liu N, Phillips AJ, Oliveira-Filho JR, da Silva GA, Gibertoni TB, Abeywikrama P, Carris LM, Chethana KWT, Dissanayake AJ, Hongsanan S, Jayasiri SC, McTaggart AR, Perera RH, Phutthacharoen K, Savchenko KG, Shivas RG, Thongklang N, Dong W, DePing W, Wijayawardena NN, Kang JC (2019) One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50. Fungal Divers 94:41–129 Kaspary TE, Bellé C, Moccellin R, Cutti L, Rigon CA, Merotto Junior A, de Farias CRJ (2018) Occurrence of Bipolaris oryzae causing leaf spot on Brachypodium distachyon in Brazil. Plant Dis 102:1450 Kaspary TE, Bellé C, Rigon CA, Cutti L, Casarotto G, Gallon M, Merotto Junior A (2019) Bipolaris oryzae causing brown leaf spot on Echinochloa crus-galli in Southern Brazil. Plant Dis 103:1038 Kekkonen M, Mutanen M, Kaila L, Nieminen M, Hebert PD (2015) Delineating species with DNA barcodes: a case of taxon dependent method performance in moths. PLoS ONE 10:e0122481 Kellogg EA, Aliscioni SS, Morrone O, Pensiero J, Zuloaga F (2009) A phylogeny of Setaria (Poaceae, Panicoideae, Paniceae) and related genera based on the chloroplast gene ndhF. Int J Plant Sci 170:117–131 Khemmuk W, Shivas RG, Henry RJ, Geering ADW (2016) Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland. Australas Plant Pathol 45:297–308 Kishino H, Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data. J Mol Evol 29:170–179 Kleczewski NM, Flory SL (2010) Leaf blight disease on the invasive grass Microstegium vimineum caused by a Bipolaris sp. Plant Dis 94:807–811 Lau K, Sheridan JE (1975) Mycoflora of rice (Oryza sativa L.) seed in New Zealand. New Zeal J Agr Res 18:237–250 Li PP, Cao ZY, Dong JG, Zhang LH, Jia H, Liu N, Li SH, Hao ZM, Gu SQ, Wang XY (2013) First report of Bipolaris papendorfii causing corn leaf spot in China. Plant Dis 97:1506 Li GF, Liu KX, Xiao SQ, Lu YY, Xue CS, Wang GQ (2016) First report of leaf spot of maize (Zea mays) caused by Bipolaris spicifera in China. Plant Dis 100:855 Li SJ, Cui XW, Gao M, Wang N, Wang ZY (2017) First report of a leaf spot caused by Bipolaris oryzae on peanut (Arachis hypogaea) in China. Plant Dis 101:1821 Li J, Gao XX, Li M, Fang F (2019a) First report of Bipolaris sorokiniana causing leaf spot on Amaranthus viridis in China. Plant Dis 103:2689 Li P, Li Z, Li D, Li J (2019b) Report of leaf spot on Pueraria lobata caused by Bipolaris sorokiniana in China. Plant Dis 103:1040 Li YG, Meng L, Gong L, Zhao TX, Ji P, Zhang QF, Cui GW (2019c) Occurrence of Bipolaris root rot caused by Bipolaris sorokiniana on Alfalfa in China. Plant Dis 103:2691 Liang X, Peng Y, Liu Y, Wang M, Yang Y, Zhang Y (2019) First report of Bipolaris bicolor causing a leaf spot disease on rubber tree. J Phytopathol 167:553–557 Lin X, Stur E, Ekrem T (2015) Exploring genetic divergence in a species-rich insect genus using 2790 DNA barcodes. PLoS ONE 10:e0138993 Lind J (1913) Danish fungi. Nordisk Publishers, Copenhagen Liu YX, Shi YP, Deng YY, Cai ZY (2016) First report of leaf spot caused by Bipolaris setariae on rubber tree in China. Plant Dis 100:1240 Lourenço CCG, Alves JL, Guatimosim E, Colman A, Barreto RW (2017) Bipolaris marantae sp nov, a novel helminthosporoid species causing foliage blight of the garden plant Maranta leuconeura in Brazil. Mycobiology 45(3):123–128 Lucas JA (1998) Plant pathology and plant pathogens. Blackwell Science, Hoboken Macedo DM, Lelis TP, Barreto RW (2016) Bipolaris maydis causing leaf blight on Rottboellia cochinchinensis in Brazil: A major crop pathogen on a major weed. Plant Dis 100:215 Manamgoda DS, Cai L, Bahkali AH, Chukeatirote E, Hyde KD (2011) Cochliobolus: an overview and current status of species. Fungal Divers 51:3–42 Manamgoda DS, Cai L, McKenzie EHC, Crous PW, Madrid H, Chukeatirote E, Shivas RG, Tan YP, Hyde KD (2012) A phylogenetic and taxonomy re-evaluation of the Bipolaris – Cochliobolus – Curvularia complex. Fungal Divers 56:131–144 Manamgoda DS, Rossman AY, Castlebury LA, Crous PW, Madrid H, Chukeatirote E, Hyde KD (2014) The genus Bipolaris. Stud Mycol 79:221–288 Manamgoda DS, Rossman AY, Castlebury LA, Chukeatirote E, Hyde KD (2015) A taxonomic and phylogenetic re-appraisal of the genus Curvularia (Pleosporaceae): human and plant pathogens. Phytotaxa 212:175–198 Marin-Felix Y, Groenewald JZ, Cai L, Chen Q, Marincowitz S, Barnes I, Bensch K, Braun U, Camporesi E, Damm U, de Beer ZW, Dissanayake A, Edwards J, Giraldo A, Hernández-Restrepo M, Hyde KD, Jayawardena RS, Lombard L, Luangsa-ard J, McTaggart AR, Rossman AY, Sandoval-Denis M, Shen M, Shivas RG, Tan YP, van der Linde EJ, Wingfield MJ, Wood AR, Zhang JQ, Zhang Y, Crous PW (2017a) Genera of phytopathogenic fungi: GOPHY 1. Stud Mycol 86:99–216 Marin-Felix Y, Senwanna C, Cheewangkoon R, Crous PW (2017b) New species and records of Bipolaris and Curvularia from Thailand. Mycosphere 8:1556–1574 Meehan F, Murphy HC (1946) A new Helminthosporium blight of oats. Am Assoc Adv Sci 104:412–414 Meier R, Shiyang K, Vaidya G, Ng PK (2006) DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Syst Biol 55:715–728 Miller MA, Pfeiffer W, Schwartz T (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, LA Misra AP (1979) Variability, physiologic specialization and genetics of pathogenicity in graminicolous Helminthosporia affecting cereal crops. Indian Phytopathol 32:1–22 Morrone O, Aagesen L, Scataglini MA, Salariato DL, Denham SS, Chemisquy MA, Sede SM, Giussani LM, Kellogg EA, Zuloaga FO (2012) Phylogeny of the Paniceae (Poaceae: Panicoideae): integrating plastid DNA sequences and morphology into a new classification. Cladistics 28:333–356 Müller MVG, Germani JC, van der Sand ST (2005) The use of RAPD to characterize Bipolaris sorokiniana isolates. Genet Mol Res 4:642–652 Nakajima H, Isomi K, Hamasaki T, Ichinoe M (1994) Sorokinianin: a novel phytotoxin produced by the phytopathogenic fungus Bipolaris sorokiniana. Tetrahedron Lett 35:9597–9600 Niu XQ, Yu FY, Zhu H, Qin WQ (2014) First report of leaf spot disease in coconut seedling caused by Bipolaris setariae in China. Plant Dis 98:1742 Ou SH (1985) Rice diseases, 2nd edn. CAB International, London Phookamsak R, Hyde KD, Jeewon R, Bhat DJ, Jones EBG, Maharachchikumbura SSN, Raspé O, Karunarathna SC, Wanasinghe DN, Hongsanan S, Doilom M, Tennakoon DS, Machado AR, Firmino AL, Ghosh A, Karunarathna A, Mešić A, Dutta AK, Thongbai B, Devadatha B, Norphanphoun C, Senwanna C, Wei DP, Pem D, Ackah FK, Wang GN, Jiang HB, Madrid H, Lee HB, Goonasekara ID, Manawasinghe IS, Kušan I, Cano J, Gené J, Li JF, Das K, Acharya K, Raj KNA, Latha KPD, Chethana KWT, He MQ, Dueñas M, Jadan M, Martín MP, Samarakoon MC, Dayarathne MC, Raza M, Park MS, Telleria MT, Chaiwan N, Matočec N, de Silva NI, Pereira OL, Singh PN, Manimohan P, Uniyal P, Shang QJ, Bhatt RP, Perera RH, Alvarenga RLM, Nogal-Prata S, Singh SK, Vadthanarat S, Oh SY, Huang SK, Rana S, Konta S, Paloi S, Jayasiri SC, Jeon SJ, Mehmood T, Gibertoni TB, Nguyen TTT, Singh U, Thiyagaraja V, Sarma VV, Dong W, Yu XD, Lu YZ, Lim YW, Chen Y, Tkalčec Z, Zhang ZF, Luo ZL, Daranagama DA, Thambugala KM, Tibpromma S, Camporesi E, Bulgakov TS, Dissanayake AJ, Senanayake IC, Dai DQ, Tang LZ, Khan S, Zhang H, Promputtha I, Cai L, Chomnunti P, Zhao RL, Lumyong S, Boonmee S, Wen TC, Mortimer PE, Xu JC (2019) Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. Fungal Divers 95:1–273 Postaire B, Magalon H, Bourmaud CAF, Bruggemann JH (2016) Molecular species delimitation methods and population genetics data reveal extensive lineage diversity and cryptic species in Aglaopheniidae (Hydrozoa). Mol Phylogenet Evol 105:36–49 Puillandre N, Lambert A, Brouillet S, Achaz G (2012) ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Mol Ecol 21:1864–1877 Quaedvlieg W, Binder M, Groenewald JZ, Summerell BA, Carnegie AJ, Burgess TI, Crous PW (2014) Introducing the consolidated species concept to resolve species in the Teratosphaeriaceae. Persoonia 33:1–40 Rambaut A (2012) FigTree version 1.4.0. https://tree.bio.ed.ac.uk/software/figtree/ Accessed 10 Dec 2019 Raza M, Zhang ZF, Hyde KD, Diao YZ, Cai L (2019) Culturable plant pathogenic fungi associated with sugarcane in southern China. Fungal Divers 99:1–104 Richardson MJ (1990) An annotated list of seed-borne diseases, 4th edn. International Seed Testing Association, Zurich Ronquist F, Huelsenbeck J (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574 Rossman AY, Manamgoda DS, Hyde KD (2013a) Proposal to conserve the name Bipolaris against Cochliobolus (Ascomycota: Pleosporales: Pleosporaceae). Taxon 62:1331–1332 Rossman AY, Manamgoda DS, Hyde KD (2013b) Proposal to conserve the name Helminthosporium maydis Y. Nisik. & C. Miyake (Bipolaris maydis) against H. maydis Brond. and Ophiobolus heterostrophus (Ascomycota: Pleosporales: Pleosporaceae). Taxon 62:1332–1333 Saccardo PA (1886) Sylloge Hyphomycetum. Sylloge Fungorum 4:1–807 Sanahuja G, Palmateer AJ (2016) First report of Bipolaris oryzae causing leaf spot on Aechmea tayoensis in Florida. Plant Dis 100:2329 Sanahuja G, Lopez P, Chase AR, Palmateer AJ (2017) First report of Bipolaris oryzae causing leaf spot on Strelitzia nicolai in Florida. Plant Dis 101:384 Sawada K (1912) Disease of crops in Formosa II, disease of Italian millet. Dept Agric Bull Formosa 64:15–19 Scheffer RP (1997) The nature of disease in plants. Cambridge University Press, Cambridge Shi T, Li CP, Li JF, Cai JM, Huang GX (2010) First report of leaf spot caused by Bipolaris setariae on Cassava in China. Plant Dis 94:919 Shimizu K, Tanaka C, Peng YL, Tsuda M (1998) Phylogeny of Bipolaris inferred from nucleotide sequences of Brn1, a reductase gene involved in melanin biosynthesis. J Gen Appl Microbiol 44:251–258 Shoemaker RA (1959) Nomenclature of Drechslera and Bipolaris, grass parasites segregated from Helminthosporium. Can J Bot 37:879–888 Simon BK, Alfonso Y (2011) AusGrass2, https://ausgrass2.myspecies.info/ Sisterna MN (1989) Two new species of Bipolaris. Plant Pathol 38:98–100 Sivanesan A (1985) New species of Bipolaris. Trans Br Mycol Soc 84:403–421 Sivanesan A (1987) Graminicolous species of Bipolaris, Curvularia, Drechslera, Exserohilum and their teleomorphs. Mycol Res 158:1–261 Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312–1313 Subramanian CV (1971) Hyphomycetes. An account of Indian species, except Cercosporae. Indian Council of Agricultural Research Publishers, New Delhi Subramanian CV, Bhat VR (1978) Taxonomy of Drechslera oryzae (Breda de Haan) Subramanian & Jain a reappraisal. Proc Int Symp Taxon Fungi (1973) 1:136–148 Sugawara F, Strobel G, Fisher LE, Van Duyne GD, Clardy J (1985) Bipolaroxin, a selective phytotoxin produced by Bipolaris cynodontis. Proc Natl Acad Sci USA 82:8291–8294 Swofford DL (2002) PAUP: phylogenetic analysis using parsimony, version 4.0 b10. Sinauer Associates, Sunderland Tan YP, Madrid H, Crous PW, Shivas RG (2014) Johnalcornia gen. et. comb. nov., and nine new combinations in Curvularia based on molecular phylogenetic analysis. Australas Plant Pathol 43:589–603 Tan YP, Crous PW, Shivas RG (2016) Eight novel Bipolaris species identified from John L. Alcorn’s collections at the Queensland Plant Pathology Herbarium (BRIP). Mycol Prog 15:1203–1214 Tänzler R, Sagata K, Surbakti S, Balke M, Riedel A (2012) DNA barcoding for community ecology-how to tackle a hyperdiverse, mostly undescribed Melanesian fauna. PLoS ONE 7:e28832 Tarnowski TL, Palmateer AJ, Crane JH (2010) First report of fruit rot on Hylocereus undatus caused by Bipolaris cactivora in South Florida. Plant Dis 94:1506 Tian P, Smith SM (2018) First report of leaf spot caused by Bipolaris victoriae on switchgrass in Georgia. Plant Dis 102:675 Tomaso-Peterson M, Balbalian CJ (2010) First report of Bipolaris oryzae causing leaf spot of switchgrass in Mississippi. Plant Dis 94:643 Vu AL, Dee MM, Gualandi RJ Jr, Huff S, Zale J, Gwinn KD, Ownley BH (2011a) First report of leaf spot caused by Bipolaris spicifera on switchgrass in the United States. Plant Dis 95:1191 Vu AL, Dee MM, Gwinn KD, Ownley BH (2011b) First report of spot blotch and common root rot caused by Bipolaris sorokiniana on switchgrass in Tennessee. Plant Dis 95:1195 Vu AL, Dee MM, Zale J, Gwinn KD, Ownley BH (2013) First report of leaf spot caused by Bipolaris oryzae on switchgrass in Tennessee. Plant Dis 97:1654 Wang HN, Wei SH (2016) First report of Bipolaris leaf blight on Arundo donax caused by Bipolaris sorokiniana in China. Plant Dis 100:2322 Wang ZY, Xie SN, Wang Y, Wu HY, Zhang M (2012) First report of Bipolaris peregianensis causing leaf spot of Cynodon dactylon in China. Plant Dis 96:917 Wang HN, Wei SH, Yang XH (2019) First report of Bipolaris leaf spot caused by Bipolaris oryzae on Typha orientalis in China. Plant Dis 103:1031 Waxman KD, Bergstrom GC (2011) First report of a leaf spot caused by Bipolaris oryzae on switchgrass in New York. Plant Dis 95:1192 Wijayawardene NN, Hyde KD, Lumbsch HT, Liu JK, Maharachchikumbura SS, Ekanayaka AH, Tian Q, Phookamsak R (2018) Outline of ascomycota: 2017. Fungal Divers 88:167–263 Wu WS (1983) Sorghum disease in Taiwan and characterization and control of its seed borne pathogens. Bull Plant Protect Taiwan 25:1–13 Xiao JZ, Tsuge T, Doke N (1992) Further evaluation of the significance of BZR-toxin produced by Bipolaris zeicola race 3 in pathogenesis on rice and maize plants. Physiol Mol Plant Pathol 40:359–370 Xiao SQ, Zhang D, Zhao JM, Yuan MY, Wang JH, Xu RD, Li GF, Xue CS (2019) First report of leaf spot of Maize (Zea mays) caused by Bipolaris setariae in China. Plant Dis 104:582 Xue LH, Liu Y, Wu WX, Liang J, Zhang L, Huang XQ, Zhou XQ, Johnson RD, Li CJ, Wang JJ, Hu JQ (2016) First report of leaf spot of Hemarthria altissima caused by Bipolaris zeae in China. Plant Dis 101:243 Zhang S, Fu Y, Mersha Z, Mo X, Palmateer AJ (2011) First report of a leaf spot on Basella alba caused by a Bipolaris sp. in Florida. Plant Dis 95:880 Zhang W, Liu J, Huo P, Zhang T, Nan Z (2017) Characterization and pathogenicity of Bipolaris peregianensis: the causal organism for leaf spot of hybrid bermudagrass in China. Eur J Plant Pathol 148:551–555 Zhao YQ, Zhang DM, Zhang LJ, Yu XY, Yu HR, Shi K, Gao K (2017) First report of brown spot on Jerusalem Artichoke (Helianthus tuberosus) caused by Bipolaris zeae in China. Plant Dis 101:2146 Zillinsky FJ (1983) Common diseases of small grain cereals: a guide to identification. Centro Internacional de Mejoramiento de Maiz y Trigo, Mexico Zummo N, Gourley LM (1987) Occurrence of target leaf-spot (Bipolaris sorghicola) on Sorghum in Mississippi. Plant Dis 71:1045