A phylogenetically-based nomenclature for Cordycipitaceae (Hypocreales)
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Araújo JPM, Hughes DP (2016) Diversity of entomopathogenic fungi: which groups conquered the insect body? Advances in Genetics 94: 1–39.
Ariyawansa HA, Hyde KD, Jayasiri SC, Buyck B, Chethana KWT, et al. (2015) Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity 75: 27–274.
Ban S, Azuma Y, Sato H, Suzuki KI, Nakagiri A (2015) Isaria takamizusanensis is the anamorph of Cordyceps ryogamimontana, warranting a new combination, Purpureocillium takamizusanense comb. nov. International Journal of Systematic and Evolutionary Microbiology 65: 2459–2465.
Bischoff JF, Chaverri P, White Jr. JF (2005) Clarification of the host substrate of Ascopolyporus and description of Ascopolyporus philodendrus sp. nov. Mycologia 97: 710–717.
Boudier E (1885) Note sur un nouveau genre et quelques nouvelles especes des Pyrenomycetes. Revue Mycologique 7: 224–227.
Chaverri P, Liu M, Hodge KT (2008) A monograph of the entomopathogenic genera Hypocrella, Moelleriella and Samuelsia gen. nov. (Ascomycota, Hypocreales, Clavicipitaceae), and their aschersonia-like anamorphs in the Neotropics. Studies in Mycology 60: 1–66.
Chiriví-Salomón JS, Danies G, Restrepo S, Sanjuan T (2015) Lecanicillium sabanense sp. nov. (Cordycipitaceae) a new fungal entomopathogen of coccids. Phytotaxa 234: 63–74.
De Faria MR, Wraight SP (2007) Mycoinsecticides and mycoacaricides: a comprehensive list with global coverage and international classification of formulation types. Biological Control 43: 237–256.
De Hoog GS (1978) Notes on some fungicolous hyphomycetes and their relatives. Persoonia 10: 33–81.
Eriksson O (1982) Cordyceps bifusispora spec. nov. Mycotaxon 15: 185–188.
Evans HC (2013) Fungal pathogens of spiders. In: Spider Ecophysiology (Nentwig W, ed.): 107–121. Berlin: Springer.
Evans HC, Samson RA (1982) Entomogenous fungi from the Galapagos Islands. Canadian Journal of Botany 60: 2325–2333.
Fries EM (1818) Observationes Mycologiae. Vol. 2 [Cancellans issue]. Copenhagen: G. Bonnier.
Gams W, de Hoog GS, Samson RA, Evans HC (1984) The hyphomycete genus Engyodontium, a link between Verticillium and Aphanocladium. Persoonia 12: 135–147.
Gams W, Zare R (2001) A revision of Verticillium sect. Prostata. III. Generic classification. Nova Hedwigia 72: 329–337.
Gams W, Hodge KT, Samson RA, Korf RP, Seifert KA (2005) Proposal to conserve the name Isaria (anamorphic fungi) with a conserved type. Taxon 54: 537.
Hodge KT, Gams W, Samson RA, Korf RP, Seifert KA (2005) Lectotypification and status of Isaria Pers.: Fr. Taxon 54: 485–489.
Humber RA, Rocha LFN, Inglis PW, Kipnis A, Luz C (2013) Morphology and molecular taxonomy of Evlachovaea-like fungi, and the status of this unusual conidial genus. Fungal Biology 117: 1–12.
Humber RA, Rombach MC (1987) Torrubiella ratticaudata sp nov. (Pyrenomycetes: Clavicipitales) and other fungi from spiders on the Solomon Islands. Mycologia 79: 375–382.
Huang B, Li CR, Li ZG, Fan MZ, Li ZZ (2002) Molecular identification of the teleomorph of Beauveria bassiana. Mycotaxon 81: 229–236.
Hywel-Jones NL, Samuels GJ (1998) Three species of Hypocrella with large stromata pathogenic on scale insects. Mycologia 90: 36–46.
Johnson D, Sung GH, Hywel-Jones NL, Luangsa-ard JJ, Bischoff JF et al. (2009) Systematics and evolution of the genus Torrubiella (Hypocreales, Ascomycota). Mycological Research 113: 279–289.
Katoh K, Misawa K, Kuma K, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059–3066.
Katoh K, Toh H (2008) Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9: 286–298.
Kepler RM, Sung G-H, Harada Y, Tanaka K, Tanaka E, et al. (2012) Host jumping onto close relatives and across kingdoms by Tyrannicordyceps (Clavicipitaceae) gen. nov. and Ustilaginoidea (Clavicipitaceae). American Journal of Botany 99: 552–561.
Kepler RM, Humber RA, Bischoff JF, Rehner SA (2014) Clarification of generic and species boundaries for Metarhizium and related fungi through multigene phylogenetics. Mycologia 106: 811–829.
Kobayasi Y (1941) The genus Cordyceps and its allies. Science Reports of the Tokyo Bunrika Daigaku, sect. B 5: 53–260.
Kobayasi Y, Shimizu D (1982) Cordyceps species from Japan 4. Bulletin of the National Science Museum Tokyo, ser. B 8: 79–91.
Kornerup A, Wanscher JH, Pavey D (1984) Methuen Handbook of Color. 3rd edn. New York: Hasting House.
Lebert H (1858) Ueber einige neue oder unvollkommen gekannte Krankheiten der Insekten, welche durch Entwicklung niederer Pflanzen im lebenden Körper enstehen. Zeitschrift für wissenschaftliche Zoologie 9: 439–453.
Li ZZ, Li CR, Huang B, Fan MZ (2001) Discovery and demonstration of the telemorph of Beauveria bassiana (Bals.) Vuill., an important entomogenous fungus. Chinese Science Bulletin 46: 751–753.
Link JH (1833) Handbuch zur Erkennung. Part 3. Berlin: S.J. Joseephy.
Linnaeus C (1753) Species Plantarum. 2 vols. Stockholm: L. Salvius.
Luangsa-ard JJ, Hywel-Jones NL, Samson RA (2004) The order level polyphyletic nature of Paecilomyces sensu lato as revealed through 18S-generated rRNA phylogeny. Mycologia 96: 773–780.
Luangsa-ard JJ, Hywel-Jones NL, Manoch L, Samson RA (2005) On the relationships of Paecilomyces sect. Isarioidea species. Mycological Research 109: 581–589.
Luangsa-ard JJ, Houbraken J, an Doorn T, Hong S-B, Borman AM, et al. (2011) Purpureocillium, a new genus for the medically important Paecilomyces lilacinus. FEMS Microbiology Letters 321: 141–149.
Mains EB (1950) Entomogenous species of Akanthomyces, Hymenostilbe, and Insecticola in North America. Mycologia 42: 566–589.
McNeill J, Barrie FF, Buck WR, Demoulin V, Greuter W, et al. (eds) (2012) International Code of Nomenclature for algae, fungi, and plants (Melbourne Code). [Regnum vegetabile no. 154.] Königstein: Koeltz Scientific Books.
Nonaka K, Kaifuchi S, Ōmura S, Masuma R (2013) Five new Simplicillium species (Cordycipitaceae) from soils in Tokyo, Japan. Mycoscience 54: 42–53.
Petch T (1924) Studies in entomogenous fungus. IV. Some Ceylon Cordyceps. Transactions of the British Mycological Society 10: 28–45.
Petch T (1931) Notes on entomogenous fungi. Transactions of the British Mycological Society 16: 55–75.
Quandt CA, Kepler RM, Gams W, Araújo JPM, Ban S, et al (2014) Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium. IMA Fungus 5: 121–134.
Rehner SA, Buckley EP (2005) A Beauveria phylogeny inferred from ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97: 84–98.
Rehner SA, Minnis AM, Sung G-H, Luangsa-ard JJ, Devotto L, Humber R (2011) Phylogeny and systematics of the anamorphic, entomopathogenic genus Beauveria. Mycologia 103: 1055–1073.
Samson RA (1974) Paecilomyces and some allied hyphomycetes. Studies in Mycology 6: 1–119.
Samson RA, Evans HC (1974) Notes on entomogenous fungi from Ghana. II. The genus Akanthomyces. Acta Botanica Neerlandica 23: 28–35.
Sanjuan T, Tabima J, Restrepo S, Læssøe T, Spatafora JW, Franco-Molano AE (2014) Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto). Mycologia 106: 260–275.
Sanjuan T, Franco-Molano AE, Kepler RM, Spatafora JW, Tabima J, et al. (2015) Five new species of entomopathogenic fungi from the Amazon in the genus Ophiocordyceps. Fungal Biology 119: 901–916.
Shimazu M, Mitsuhashi W, Hashimoto H (1988) Cordyceps brongniartii sp. nov, the teleomorph of Beauveria brongniartii. Transactions of the Mycological Society of Japan 29: 323–330.
Shrestha B, Hyun MW, Oh J, Han J-G, Lee TH, et al. (2014a) Molecular evidence of a teleomorph-anamorph connection between Cordyceps scarabaeicola and Beauveria sungii and its implication for the systematics of Cordyceps sensu stricto. Mycoscience 55: 231–239.
Shrestha B, Tanaka E, Han J-G, Oh J, Han SK, et al. (2014b) A brief chronicle of the genus Cordyceps Fr, the oldest valid genus in Cordycipitaceae (Hypocreales, Ascomycota). Mycobiology 42: 93–99.
Shrestha B, Tanaka E, Hyun MW, Han J-G, Chang SK, et al. (2016) Coleopteran and lepidopteran hosts of the entomopathogenic genus Cordyceps sensu lato. Journal of Mycology 2016, article ID 7648219.
Spatafora JW, Quandt CA, Kepler RM, Sung G-H, Shrestha B, et al (2015) New 1F1N species combinations in Ophiocordycipitaceae (Hypocreales). IMA Fungus 6: 357–362.
Sukarno N, Kurihara Y Ilyas M, Mangunwardoyo W, Yuniarti E, et al (2009) Lecanicillium and Verticillium species from Indonesia and Japan including three new species. Mycoscience 50: 369–379.
Sullivan RF, Bills GF, Hywel-Jones NL, White JF jr (2000) Hyperdermium: a new clavicipitalean genus for some tropical epibionts of dicotyledonous plants. Mycologia 92: 908–918.
Sung G-H, Spatafora JW, Zare R, Hodge KT, Gams W (2001) A revision of Verticillium sect. Prostata. II. Generic delimitation using ribosomal DNA sequences. Nova Hedwigia 72: 311–328.
Sung G-H, Hywel-Jones NL, Sung J-M, Luangsa-ard JJ, Shrestha B, Spatafora JW (2007) Phylogenetic classification of Cordyceps and the clavicipitaceous fungi. Studies in Mycology 57: 5–59.
Talavera G, Castresana J (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology 56: 564–577.
Tsang C-C, Chan JFW, Pong W-M, Chen JHK, Ngan AHY, et al (2016) Cutaneous hyalohyphomycosis due to Parengyodontium album gen. et comb. nov. Medical Mycology 54: 699–713.
Vega FE, Goettel MS, Blackwell M, Chandler D, Jackson MA, et al (2009) Fungal entomopathogens: new insights on their ecology. Fungal Ecology 2: 149–159.
Xiao G, Ying S-H, Zheng P, Wang Z-L, Zhang S, et al. (2012) Genomic perspectives on the evolution of fungal entomopathogenicity in Beauveria bassiana. Scientific Reports 2: 483.
Yarrow PJ [transl., Ainsworth GC, ed.] (1958) Bassi A [1835, 1836] Del Mal del Segno. [Phytopathological Classics no. 10.] Ithaca, NY: American Phytopathological Society Press.
Yip HY, Rath AC (1989) Microhilum oncoperae gen. et sp. nov (Deuteromycotina: Hyphomycetes): the cause of mycosis on the larvae of Oncopera intricata (Lepidoptera: Hepialidae). Journal of Invertebrate Pathology. 53: 361–364.