A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening
Tóm tắt
Từ khóa
Tài liệu tham khảo
Thompson, A.J. et al. Molecular and genetic characterisation of a novel pleiotropic tomato-ripening mutant. Plant Physiol. 120, 383–389 (1999).
Eriksson, E.M. et al. Effect of the Colourless non-ripening mutation on cell wall biochemistry and gene expression during tomato fruit development and ripening. Plant Physiol. 136, 4184–4197 (2004).
Cubas, P., Vincent, C. & Coen, E. An epigenetic mutation responsible for natural variation in floral symmetry. Nature 401, 157–161 (1999).
Kalisz, S. & Purugganan, M.D. Epialleles via DNA methylation: consequences for plant evolution. Trends Ecol. Evol. 19, 309–314 (2004).
Alexander, L. & Grierson, D. Ethylene biosynthesis and action in tomato: a model for climacteric fruit ripening. J. Exp. Bot. 53, 2039–2055 (2002).
Giovannoni, J.J. Genetic regulation of fruit development and ripening. Plant Cell 16, S170–S180 (2004).
Vrebalov, J. et al. A MADS-box gene necessary for ripening at the tomato ripening-inhibitor (rin) locus. Science 296, 343–346 (2002).
Fraser, P., Bramley, P. & Seymour, G.B. Effect of the Cnr mutation on carotenoid formation during tomato fruit ripening. Phytochemistry 58, 75–79 (2001).
Orfila, C. et al. Altered middle lamella homogalacturonan and disrupted deposition of (1 → 5)-alpha-L-arabinan in the pericarp of Cnr, a ripening mutant of tomato. Plant Physiol. 126, 210–221 (2001).
Orfila, C. et al. Altered cell wall disassembly during ripening of Cnr tomato fruit: implications for cell adhesion and fruit softening. Planta 215, 440–447 (2002).
Tor, M. et al. Genetic analysis and FISH mapping of the Colourless non-ripening locus of tomato. Theor. Appl. Genet. 104, 165–170 (2002).
Tanksley, S.D. et al. High density molecular linkage maps of the tomato and potato genomes. Genetics 132, 1141–1160 (1992).
Klein, J., Saedler, H. & Huijser, P. A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA. Mol. Gen. Genet. 250, 7–16 (1996).
Cardon, G.H., Hohmann, S., Nettesheim, K., Saedler, H. & Huijser, P. Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3: a novel gene involved in the floral transition. Plant J. 12, 367–377 (1997).
Unte, U.S. et al. SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis. Plant Cell 15, 1009–1019 (2003).
Stone, J.M., Liang, X., Nekl, E.R. & Stiers, J.J. Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1. Plant J. 41, 744–754 (2005).
Liljegren, S.J. et al. Control of fruit patterning in Arabidopsis by INDEHISCENT. Cell 116, 843–853 (2004).
Martienssen, R. & Colot, V. DNA methylation and epigenetic inheritance in plants and filamentous fungi. Science 293, 1070–1074 (2001).
Jacobson, S.E. & Meyerowitz, E.M. Hypermethylated SUPERMAN epigenetic alleles in Arabidopsis. Science 277, 1100–1103 (1997).
Kinoshita, T. et al. One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation. Science 303, 521–523 (2004).
Lindroth, A.M., Cao, X., Jackson, J.P., Zilberman, D., McCallum, C.M., Henikoff, S. & Jacobsen, S.E. Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation. Science 292, 2077–2080 (2001).
Messeguer, R., Ganal, M.W., Steffens, J.C. & Tanksley, S.D. Characterization of the level, target sites and inheritance of cytosine methylation in tomato nuclear DNA. Plant Mol. Biol. 16, 753–770 (1991).
Chang, S., Puryear, J. & Cairney, J. A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11, 113–116 (1993).
Zou, N., Ditty, S., Li, B. & Lo, S. Random priming PCR strategy to amplify and clone trace amounts of DNA. Biotechniques 35, 758–760 (2003).
Zhang, Z. & Gurr, S. Walking into the unknown: a 'step down' PCR-based technique leading to the direct sequence analysis of flanking genomic DNA. Gene 253, 145–150 (2000).
Diatchenko, L. et al. Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc. Natl. Acad. Sci. USA 93, 6025–6030 (1996).
Li, L. & Dahiya, R. MethPrimer: designing primers for methylation PCRs. Bioinformatics 18, 1427–1431 (2002).