A multi-target dsRNA for simultaneous inhibition of yellow head virus and white spot syndrome virus in shrimp

Journal of Biotechnology - Tập 321 - Trang 48-56 - 2020
Dam Chaimongkon1, Wanchai Assavalapsakul2, Sakol Panyim1,3, Pongsopee Attasart1
1Institute of Molecular Biosciences, Mahidol University, Salaya, Nakhon Pathom, 73170, Thailand
2Department of Microbiology, Faculty of Science, Chulalongkorn University, Thailand
3Department of Biochemistry, Faculty of Science, Mahidol University, Bangkok 10400, Thailand

Tài liệu tham khảo

Assavalapsakul, 2009, Application of YHV-protease dsRNA for protection and therapeutic treatment against yellow head virus infection in Litopenaeus vannamei, Dis. Aquatic Organ., 84, 167, 10.3354/dao02044 Attasart, 2009, Inhibition of white spot syndrome virus replication in Penaeus monodon by combined silencing of viral rr2 and shrimp PmRab7, Virus Res., 145, 127, 10.1016/j.virusres.2009.06.018 Attasart, 2013, Ingestion of bacteria expressing dsRNA triggers specific RNA silencing in shrimp, Virus Res., 171, 252, 10.1016/j.virusres.2012.11.012 Bolognesi, 2012, Characterizing the mechanism of action of double-stranded RNA activity against western corn rootworm (Diabrotica virgifera virgifera LeConte), PLoS One, 7, 10.1371/journal.pone.0047534 Chang, 2009, Dual-target gene silencing by using long, synthetic siRNA duplexes without triggering antiviral responses, Mol. Cells, 27, 689, 10.1007/s10059-009-0093-0 Cong, 2010, Construction of a multiple targeting RNAi plasmid that inhibits target gene expression and FMDV replication in BHK-21 cells and suckling mice, Vet. Res. Commun., 34, 335, 10.1007/s11259-010-9360-y Flegel, 1996, Current status of research on yellow head virus and white spot virus in Thailand, 126 Gou, 2007, A novel approach for the construction of multiple shRNA expression vectors, J. Gene Med., 9, 751, 10.1002/jgm.1080 Gouda, 2010, An altered method of feeding RNAi that knocks down multiple genes simultaneously in the nematode Caenorhabditis elegans, Biosci. Biotechnol. Biochem., 74, 2361, 10.1271/bbb.100579 Hamano, 2017, Presence of viral pathogens amongst wild Penaeus monodon in Thailand, JARQ, 51, 191, 10.6090/jarq.51.191 Hinton, 2008, Inhibition of chicken anaemia virus replication using multiple short-hairpin RNAs, Antiviral Res., 80, 143, 10.1016/j.antiviral.2008.05.009 Jariyapong, 2015, Delivery of double stranded RNA by Macrobrachium rosenbergii nodavirus-like particles to protect shrimp from white spot syndrome virus, Aquaculture, 435, 86, 10.1016/j.aquaculture.2014.09.034 Junn, 2010, Effective knockdown of multiple target genes by expressing the single transcript harbouring multi-cistronic shRNAs, Biochem. Biophys. Res. Commun., 396, 861, 10.1016/j.bbrc.2010.05.008 Lee, 2013, RNA interference-mediated simultaneous silencing of four genes using cross-shaped RNA, Mol. Cells, 35, 320, 10.1007/s10059-013-2316-7 Leu, 2009, Whispovirus, Curr. Top. Microbiol. Immunol., 328, 197 Li, 2011, In vitro inhibition of CSFV replication by multiple siRNA expression, Antiviral Res., 91, 209, 10.1016/j.antiviral.2011.06.005 Li, 2015, Systemic RNA interference deficiency-1 (SID-1) extracellular domain selectively binds long double-stranded RNA and is required for RNA transport by SID-1, J. Biol. Chem., 290, 18904, 10.1074/jbc.M115.658864 Ma, 2014, Significant inhibition of two different genotypes of grass carp reovirus in vitro using multiple shRNAs expression vectors, Virus Res., 189, 47, 10.1016/j.virusres.2014.05.009 MacRae, 2007, Structural determinants of RNA recognition and cleavage by Dicer, Nat. Struct. Mol. Biol., 14, 934, 10.1038/nsmb1293 McIntyre, 2011, A comparison of multiple shRNA expression methods for combinatorial RNAi, Genet. Vaccines Ther., 9, 9, 10.1186/1479-0556-9-9 Miller, 2009, CSN-5, a component of the COP9 signalosome complex, regulates the levels of UNC-96 and UNC-98, two components of M-lines in Caenorhabditis elegans muscle, Mol. Biol. Cell, 20, 3608, 10.1091/mbc.e09-03-0208 Miller, 2012, Dissecting systemic RNA interference in the red flour beetle Tribolium castaneum: parameters affecting the efficiency of RNAi, PLoS One, 7, 10.1371/journal.pone.0047431 Miyata, 2014, Establishing an in vivo assay system to identify components involved in environmental RNA interference in the western corn rootworm, PLoS One, 9, 10.1371/journal.pone.0101661 Mohan, 1998, Histopathology of cultured showing gross signs of yellow head syndrome and white spot syndrome during 1994 Indian epizootics, Dis. Aquatic Organ., 34, 9, 10.3354/dao034009 Posiri, 2013, A simple one-step method for producing dsRNA from E. Coli to inhibit shrimp virus replication, J. Virol. Meth., 188, 64, 10.1016/j.jviromet.2012.11.033 Robalino, 2004, Induction of antiviral immunity by double-stranded RNA in a marine invertebrate, J. Virol., 78, 10442, 10.1128/JVI.78.19.10442-10448.2004 Sanitt, 2014, Protection of yellow head virus infection in shrimp by feeding of bacteria expressing dsRNAs, J. Biotechnol., 179, 26, 10.1016/j.jbiotec.2014.03.016 Sanitt, 2016, Cholesterol-based cationic liposome increases dsRNA protection of yellow head virus infection in Penaeus vannamei, J. Biotechnol., 228, 95, 10.1016/j.jbiotec.2016.04.049 Sarathi, 2008, Oral administration of bacterially expressed VP28 dsRNA to protect Penaeus monodon from white spot syndrome virus, Mar. Biotechnol. (NY), 10, 242, 10.1007/s10126-007-9057-6 Senapin, 2010, Impact of yellow head virus outbreaks in the white leg shrimp, Penaeus vannamei (Boone), in Thailand, J. Fish Dis., 33, 421, 10.1111/j.1365-2761.2009.01135.x Shekhar, 2009, Application of nucleic-acid-based therapeutics for viral infections in shrimp aquaculture, Mar. Biotechnol., 11, 1, 10.1007/s10126-008-9155-0 Sinnuengnong, 2018, Administration of co-expressed Penaeus stylirostris 1 densovirus-like particles and dsRNA-YHV-Pro provide protection against yellow head virus in shrimp, J. Biotechnol., 267, 63, 10.1016/j.jbiotec.2018.01.002 Song, 2008, Multiple shRNA expressing vector enhances efficiency of gene silencing, BMB Rep., 41, 358, 10.5483/BMBRep.2008.41.5.358 Thammasorn, 2015, Large-scale production and antiviral efficacy of multi-target double-stranded RNA for the prevention of white spot syndrome virus (WSSV) in shrimp, BMC Biotechnol., 15, 110, 10.1186/s12896-015-0226-9 Tirasophon, 2005, Silencing of yellow head virus replication in penaeid shrimp cells by dsRNA, Biochem. Biophys. Res. Commun., 334, 102, 10.1016/j.bbrc.2005.06.063 Treerattrakool, 2011, Induction of ovarian maturation and spawning in Penaeus monodon broodstock by double-stranded RNA, Mar. Biotechnol., 13, 163, 10.1007/s10126-010-9276-0 Vermeulen, 2005, The contributions of dsRNA structure to Dicer specificity and efficiency, RNA, 11, 674, 10.1261/rna.7272305 Wang, 2006, Development and validation of vectors containing multiple siRNA expression cassettes for maximizing the efficiency of gene silencing, BMC Biotechnol., 6, 50, 10.1186/1472-6750-6-50 Winston, 2002, Systemic RNAi in C. Elegans requires the putative transmembrane protein SID-1, Science, 295, 2456, 10.1126/science.1068836 Wu, 2005, Inhibition of Hepatitis B virus gene expression by single and dual small interfering RNA treatment, Virus Res., 112, 100, 10.1016/j.virusres.2005.04.001 Yodmuang, 2006, YHV-protease dsRNA inhibits YHV replication in Penaeus monodon and prevents mortality, Biochem. Biophys. Res. Commun., 341, 351, 10.1016/j.bbrc.2005.12.186