A method for closed-loop presentation of sensory stimuli conditional on the internal brain-state of awake animals

Arieli, 1996, Dynamics of ongoing activity: explanation of the large variability in evoked cortical responses, Science, 273, 1868, 10.1126/science.273.5283.1868 Asaka, 2005, Nonpharmacological amelioration of age-related learning deficits: the impact of hippocampal theta-triggered training, Proc Natl Acad Sci U S A, 102, 13284, 10.1073/pnas.0506515102 Azouz, 1999, Cellular mechanisms contributing to response variability of cortical neurons in vivo, J Neurosci, 19, 2209, 10.1523/JNEUROSCI.19-06-02209.1999 Berens, 2009, CircStat: A MATLAB Toolbox for Circular Statistics, J Stat Softw, 31, 1, 10.18637/jss.v031.i10 Bolinger, 2012, Closed-loop measurements of iso-response stimuli reveal dynamic nonlinear stimulus integration in the retina, Neuron, 73, 333, 10.1016/j.neuron.2011.10.039 Brainard, 1997, The psychophysics toolbox, Spat Vis, 10, 433, 10.1163/156856897X00357 Bullock TH. How do brains work?: papers of a comparative neurophysiologist. Birkhäuser: Boston, 1993. Burns, 2010, Comparisons of the dynamics of local field potential and multiunit activity signals in macaque visual cortex, J Neurosci, 30, 13739, 10.1523/JNEUROSCI.0743-10.2010 Burns, 2011, Is gamma-band activity in the local field potential of V1 cortex a clock or filtered noise?, J Neurosci, 31, 9658, 10.1523/JNEUROSCI.0660-11.2011 Burns, 2010, Searching for autocoherence in the cortical network with a time-frequency analysis of the local field potential, J Neurosci, 30, 4033, 10.1523/JNEUROSCI.5319-09.2010 Chapin, 1999, Real-time control of a robot arm using simultaneously recorded neurons in the motor cortex, Nat Neurosci, 2, 664, 10.1038/10223 Chen, 2011, Real-time brain oscillation detection and phase-locked stimulation using autoregressive spectral estimation and time-series forward prediction, IEEE Trans Biomed Eng Colgin, 2009, Frequency of gamma oscillations routes flow of information in the hippocampus, Nature, 462, 353, 10.1038/nature08573 Ego-Stengel, 2010, Disruption of ripple-associated hippocampal activity during rest impairs spatial learning in the rat, Hippocampus, 20, 1 El Boustani, 2009, Network-state modulation of power-law frequency-scaling in visual cortical neurons, PLoS Computational Biology, 5 Elze, 2010, Achieving precise display timing in visual neuroscience experiments, J Neurosci Methods, 191, 171, 10.1016/j.jneumeth.2010.06.018 Fetz, 1969, Operant conditioning of cortical unit activity, Science, 163, 955, 10.1126/science.163.3870.955 Fisher, 1993 Girardeau, 2009, Selective suppression of hippocampal ripples impairs spatial memory, Nat Neurosci, 12, 1222, 10.1038/nn.2384 Goard, 2009, Basal forebrain activation enhances cortical coding of natural scenes, Nat Neurosci, 12, 1444, 10.1038/nn.2402 Griffin, 2004, Theta-contingent trial presentation accelerates learning rate and enhances hippocampal plasticity during trace eyeblink conditioning, Behav Neurosci, 118, 403, 10.1037/0735-7044.118.2.403 Hochberg, 2006, Neuronal ensemble control of prosthetic devices by a human with tetraplegia, Nature, 442, 164, 10.1038/nature04970 Horwitz, 2012, Nonlinear analysis of macaque V1 color tuning reveals cardinal directions for cortical color processing, Nat Neurosci, 10.1038/nn.3105 Hwang, 2009, Brain control of movement execution onset using local field potentials in posterior parietal cortex, J Neurosci, 29, 14363, 10.1523/JNEUROSCI.2081-09.2009 Jadhav, 2012, Awake hippocampal sharp-wave ripples support spatial memory, Science, 336, 1454, 10.1126/science.1217230 Jarvis, 2001, Sampling properties of the spectrum and coherency of sequences of action potentials, Neural Comput, 13, 717, 10.1162/089976601300014312 Jerbi, 2009, Watching brain TV, playing brain ball: exploring novel bci strategies using real-time analysis of human intracranial data, Int Rev Neurobiol, 86, 159, 10.1016/S0074-7742(09)86012-1 Kotowicz, 2010, Time course of target recognition in visual search, Front Hum Neurosci, 4 Krasner, 1988, A cookbook for using the model-view-controller user interface paradigm in smalltalk-80, J Object-Orient Prog, 1, 41 Kreiman, 2006, Object selectivity of local field potentials and spikes in the macaque inferior temporal cortex, Neuron, 49, 433, 10.1016/j.neuron.2005.12.019 Kreiman, 2000, Category-specific visual responses of single neurons in the human medial temporal lobe, Nat Neurosci, 3, 946, 10.1038/78868 Leopold, 2003, Very slow activity fluctuations in monkey visual cortex: implications for functional brain imaging, Cereb Cortex, 13, 422, 10.1093/cercor/13.4.422 Marguet, 2011, State-dependent representation of amplitude-modulated noise stimuli in rat auditory cortex, J Neurosci, 31, 6414, 10.1523/JNEUROSCI.5773-10.2011 Mitra, 2008 Moritz, 2008, Direct control of paralysed muscles by cortical neurons, Nature, 456, 10.1038/nature07418 Mormann, 2011, category-specific response to animals in the right human amygdala, Nat Neurosci, 14, 1247, 10.1038/nn.2899 Nelson, 2008, Review of signal distortion through metal microelectrode recording circuits and filters, J Neurosci Methods, 169, 141, 10.1016/j.jneumeth.2007.12.010 Pavlides, 1988, Long-term potentiation in the dentate gyrus is induced preferentially on the positive phase of theta-rhythm, Brain Res, 439, 383, 10.1016/0006-8993(88)91499-0 Pelli, 1997, The videotoolbox software for visual psychophysics: transforming numbers into movies, Spat Vis, 10, 437, 10.1163/156856897X00366 Perry, 2002, Gaze-contingent real-time simulation of arbitrary visual fields, P Soc Photo-Opt Ins, 4662, 57 Peterson, 2007 Powers, 1980, A stereotaxic atlas of the forebrain and midbrain of the eastern painted turtle (Chrysemys picta picta), J Hirnforsch, 21, 125 Prechtl, 1994, Visual motion induces synchronous oscillations in turtle visual cortex, Proc Natl Acad Sci U S A, 91, 12467, 10.1073/pnas.91.26.12467 Prechtl, 1992, Barbiturate sensitive components of visual ERPs in a reptile, Neuroreport, 3, 801, 10.1097/00001756-199209000-00020 Prechtl, 1994, Event-related potentials to omitted visual stimuli in a reptile, Electroencephalogr Clin Neurophysiol, 91, 54, 10.1016/0013-4694(94)90018-3 Prechtl, 1993, Plurality of visual mismatch potentials in a reptile, J Cogn Neurosci, 5, 177, 10.1162/jocn.1993.5.2.177 Prechtl, 2000, Direct evidence for local oscillatory current sources and intracortical phase gradients in turtle visual cortex, Proc Natl Acad Sci U S A, 97, 877, 10.1073/pnas.97.2.877 Prechtl, 1997, Visual stimuli induce waves of electrical activity in turtle cortex, Proc Natl Acad Sci U S A, 94, 7621, 10.1073/pnas.94.14.7621 Quiroga, 2005, Invariant visual representation by single neurons in the human brain, Nature, 435, 1102, 10.1038/nature03687 Renard, 2010, OpenViBE: an open-source software platform to design, test, and use brain-computer interfaces in real and virtual environments, Presence-Teleop Virt, 19, 35, 10.1162/pres.19.1.35 Rousche, 1992, A method for pneumatically inserting an array of penetrating electrodes into cortical tissue, Ann Biomed Eng, 20, 413, 10.1007/BF02368133 Rutishauser U. Learning and representation of declarative memories by single neurons in the human brain. Computation&Neural Systems. PhD Thesis. Pasadena: California Institute of Technology; 2008. Rutishauser, 2006, Online detection and sorting of extracellularly recorded action potentials in human medial temporal lobe recordings, in vivo, J Neurosci Methods, 154, 204, 10.1016/j.jneumeth.2005.12.033 Schalk, 2004, BCI2000: A general-purpose, brain-computer interface (BCI) system, IEEE Trans Bio-Med Eng, 51, 1034, 10.1109/TBME.2004.827072 Settles B. Active Learning Literature Survey. Computer Sciences Technical Report. Madison: University of Wisconsin; 2009. Slotine, 1991 Sridharan, 2011, Space coding by gamma oscillations in the barn owl optic tectum, J Neurophysiol, 105, 2005, 10.1152/jn.00965.2010 Steriade, 2001, Impact of network activities on neuronal properties in corticothalamic systems, J Neurophysiol, 86, 1, 10.1152/jn.2001.86.1.1 Taylor, 2002, Direct cortical control of 3D neuroprosthetic devices, Science, 296, 1829, 10.1126/science.1070291 Ulinski, 1990, The cerebral cortex of reptiles, 139, 10.1007/978-1-4757-9622-3_5 Vetter, 2004, Chronic neural recording using silicon-substrate microelectrode arrays implanted in cerebral cortex, IEEE Trans Bio-Med Eng, 51, 896, 10.1109/TBME.2004.826680 Zhu, 2005, Thalamocortical connections in the pond turtle Pseudemys scripta elegans, Brain Behav Evol, 65, 278, 10.1159/000084317