A joint PCR-based gene-targeting method using electroporation in the pathogenic fungus Trichosporon asahii

AMB Express - Tập 12 - Trang 1-11 - 2022
Yasuhiko Matsumoto1, Tae Nagamachi1, Asami Yoshikawa1, Tsuyoshi Yamada2,3, Takashi Sugita1
1Department of Microbiology, Meiji Pharmaceutical University, Kiyose, Japan
2Teikyo University, Institute of Medical Mycology, Hachioji, Japan
3Asia International Institute of Infectious Disease Control, Teikyo University, Tokyo, Japan

Tóm tắt

Trichosporon asahii is a pathogenic fungus that causes deep-seated fungal infections in immunocompromised patients. Established methods for generating gene-deficient T. asahii mutants exist, but the frequency of obtaining transformants by electroporation remains low. In the present study, we optimized the conditions for gene transfer by electroporation using a ku70 gene-deficient mutant with high recombination efficiency. Introducing a DNA fragment by electroporation into T. asahii cells on Sabouraud dextrose agar to generate a cnb1 gene-deficient mutant and incubating for 1 day led to the growth of approximately 100 transformants. When the incubation period was extended to 2 days or 5 days, however, only 2 or no transformants, respectively, were grown. The highest number of transformants was grown by electroporation when a square wave at 1.8 kV (9 kV/cm) was applied for 5 ms. In addition, the number of transformants increased with an increase in the length of the homologous region, and transformants did not grow when the homologous region was less than 500 base pairs. A DNA fragment was produced for deletion of the cnb1 gene by joint PCR, and the cnb1 gene-deficient mutant was obtained by introducing the DNA fragment by electroporation. These results indicate that DNA fragments produced by joint PCR can be used to generate gene-deficient mutants of T. asahii through gene transfer by electroporation.

Tài liệu tham khảo

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