A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes

Journal of Computational Biology - Tập 9 Số 2 - Trang 447-464 - 2002
Gert Thijs1, Kathleen Marchal1, Magali Lescot1, Stéphane Rombauts2, Bart De Moor1, Pierre Rouzé2, Yves Moreau1
1ESAT-SCD, KULeuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium
2UGENT - Universiteit Gent = Ghent University (St. Pietersnieuwstraat 33, 9000 Gent, - Belgium)

Tóm tắt

Từ khóa


Tài liệu tham khảo

10.1016/S0959-440X(00)00212-8

10.1016/S0097-8485(96)00040-X

10.1007/BF00993379

10.1104/pp.117.2.687

10.1016/S0959-440X(99)80054-2

10.1093/nar/27.23.4636

10.1073/pnas.95.25.14863

10.1101/gr.9.11.1106

10.1006/jmbi.2000.3519

10.1093/bioinformatics/16.4.326

Krogh A., 1997, Conf. Intelligent Systems in Molecular Biology, 179

10.1126/science.8211139

10.1093/nar/30.1.325

10.2307/2291508

10.1038/35015701

10.1093/nar/26.4.1107

10.1093/nar/29.3.774

10.1093/bioinformatics/15.5.362

10.1016/S0168-9525(00)02174-0

10.1093/bioinformatics/15.11.887

10.1073/pnas.86.24.9851

10.1016/S1369-5266(98)80264-1

10.1105/tpc.12.5.707

10.1038/nbt1098-939

10.1046/j.1365-313X.1997.11030513.x

10.1016/S0952-7915(99)00074-6

Sinha S., 2000, Conf. Intelligent Systems for Molecular Biology, 8, 37

10.1038/10343

10.1093/bioinformatics/17.12.1113

10.1093/bioinformatics/18.2.331

Tompa M., 1999, Conf. Intelligent Systems for Molecular Biology, 7, 262

10.1006/jmbi.1998.1947

10.1093/nar/28.8.1808

10.1002/(SICI)1097-0061(20000130)16:2<177::AID-YEA516>3.0.CO;2-9

10.1006/jmbi.2000.3576

10.1073/pnas.95.1.334

Zhang M.Q., 1999, Genome Res., 9, 681, 10.1101/gr.9.8.681