Drug susceptibility testing and mortality in patients treated for tuberculosis in high-burden countries: a multicentre cohort study

The Lancet Infectious Diseases - Tập 19 - Trang 298-307 - 2019
Kathrin Zürcher1,2,3, Marie Ballif1, Lukas Fenner1, Sonia Borrell2,3, Peter M Keller4,5, Joachim Gnokoro6, Olivier Marcy7, Marcel Yotebieng8, Lameck Diero9, E Jane Carter9, Neesha Rockwood10,11, Robert J Wilkinson10,11,12, Helen Cox13, Nicholas Ezati14,15, Alash'le G Abimiku14, Jimena Collantes16, Anchalee Avihingsanon17, Kamon Kawkitinarong17,18, Miriam Reinhard2,3, Rico Hömke4,5
1Institute of Social and Preventive Medicine (ISPM), University of Bern, Bern, Switzerland
2Swiss Tropical and Public Health Institute, Basel, Switzerland
3University of Basel, Basel, Switzerland
4Institute of Medical Microbiology, University of Zurich, Zurich, Switzerland
5Swiss National Center for Mycobacteria, Zurich, Switzerland
6Centre de Prise en Charge de Recherche et de Formation, Yopougon, Abidjan, Côte d'Ivoire
7Bordeaux Population Health Research Center, INSERM U1219, University of Bordeaux, Bordeaux, France
8Ohio State University College of Public Health, Columbus, OH, USA
9Department of Medicine, Moi University School of Medicine, and Moi Teaching and Referral Hospital, Eldoret, Kenya
10Wellcome Centre for Infectious Diseases Research in Africa, University of Cape Town, Cape Town, South Africa
11Department of Medicine, Imperial College London, London, UK
12Francis Crick Institute, London, UK
13Division of Medical Microbiology and the Institute for Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa
14Institute of Human Virology, Abuja, Nigeria
15National Tuberculosis and Leprosy Training Center, Saye, Zaria, Kaduna State, Nigeria
16Instituto de Medicina Tropical “Alexander von Humboldt”, Universidad Peruana Cayetano Heredia, Lima, Peru
17HIV-NAT/Thai Red Cross AIDS Research Centre, Bangkok, Thailand
18Tuberculosis Research Unit, Department of Medicine, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand

Tài liệu tham khảo

2018 Egger, 1997, Impact of new antiretroviral combination therapies in HIV infected patients in Switzerland: prospective multicentre study, BMJ, 315, 1194, 10.1136/bmj.315.7117.1194 May, 2010, Prognosis of patients with HIV-1 infection starting antiretroviral therapy in sub-Saharan Africa: a collaborative analysis of scale-up programmes, Lancet, 376, 449, 10.1016/S0140-6736(10)60666-6 2007, Tuberculosis after initiation of antiretroviral therapy in low-income and high-income countries, Clin Infect Dis, 45, 1518, 10.1086/522986 Lawn, 2010, Antiretrovirals and isoniazid preventive therapy in the prevention of HIV-associated tuberculosis in settings with limited health-care resources, Lancet Infect Dis, 10, 489, 10.1016/S1473-3099(10)70078-5 Gupta, 2012, Tuberculosis incidence rates during 8 years of follow-up of an antiretroviral treatment cohort in South Africa: comparison with rates in the community, PLoS One, 7, e34156, 10.1371/journal.pone.0034156 Mariandyshev, 2017, Drug-resistant tuberculosis threatens WHO's End-TB strategy, Lancet Infect Dis, 17, 674, 10.1016/S1473-3099(17)30246-3 Gandhi, 2006, Extensively drug-resistant tuberculosis as a cause of death in patients co-infected with tuberculosis and HIV in a rural area of South Africa, Lancet, 368, 1575, 10.1016/S0140-6736(06)69573-1 Klopper, 2013, Emergence and spread of extensively and totally drug-resistant tuberculosis, South Africa, Emerg Infect Dis, 19, 449, 10.3201/eid1903.120246 Lange, 2014, Management of patients with multidrug-resistant/extensively drug-resistant tuberculosis in Europe: a TBNET consensus statement, Eur Respir J, 44, 23, 10.1183/09031936.00188313 Horsburgh, 2015, Treatment of tuberculosis, N Engl J Med, 373, 2149, 10.1056/NEJMra1413919 Wright, 2009, Epidemiology of antituberculosis drug resistance 2002–07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance, Lancet, 373, 1861, 10.1016/S0140-6736(09)60331-7 Falzon, 2011, WHO guidelines for the programmatic management of drug-resistant tuberculosis: 2011 update, Eur Respir J, 38, 516, 10.1183/09031936.00073611 Köser, 2013, Whole-genome sequencing for rapid susceptibility testing of M. tuberculosis, N Engl J Med, 369, 290, 10.1056/NEJMc1215305 Schon, 2017, Mycobacterium tuberculosis drug-resistance testing: challenges, recent developments and perspectives, Clin Microbiol Infect, 23, 154, 10.1016/j.cmi.2016.10.022 Boehme, 2010, Rapid molecular detection of tuberculosis and rifampin resistance, N Engl J Med, 363, 1005, 10.1056/NEJMoa0907847 Egger, 2012, Cohort Profile: the international epidemiological databases to evaluate AIDS (IeDEA) in sub-Saharan Africa, Int J Epidemiol, 41, 1256, 10.1093/ije/dyr080 McGowan, 2007, Cohort profile: Caribbean, Central and South America Network for HIV research (CCASAnet) collaboration within the International Epidemiologic Databases to Evaluate AIDS (IeDEA) programme, Int J Epidemiol, 36, 969, 10.1093/ije/dym073 2015 Harris, 2009, Research electronic data capture (REDCap)—a metadata-driven methodology and workflow process for providing translational research informatics support, J Biomed Inform, 42, 377, 10.1016/j.jbi.2008.08.010 2014 2018 2014 Greenland, 1993, Maximum likelihood estimation of the attributable fraction from logistic models, Biometrics, 49, 865, 10.2307/2532206 Cox, 2018, Precision medicine for drug-resistant tuberculosis in high-burden countries: is individualised treatment desirable and feasible?, Lancet Infect Dis, 18, e282, 10.1016/S1473-3099(18)30104-X 2011 Steingart, 2014, Xpert® MTB/RIF assay for pulmonary tuberculosis and rifampicin resistance in adults, Cochrane Database Syst Rev, 1 Dheda, 2017, The epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant, extensively drug-resistant, and incurable tuberculosis, Lancet Respir Med, 5, 291, 10.1016/S2213-2600(17)30079-6 Sanker, 2017, Are WHO approved nucleic acid amplification tests causing large-scale ‘false identification’ of rifampicin-resistant tuberculosis? Programmatic experience from South India, Int J Mycobacteriology, 6, 21, 10.4103/2212-5531.201900 Chakravorty, 2017, The new Xpert MTB/RIF ultra: improving detection of Mycobacterium tuberculosis and resistance to rifampin in an assay suitable for point-of-care testing, MBio, 8, e00812, 10.1128/mBio.00812-17 Rinder, 2001, Heteroresistance in Mycobacterium tuberculosis, Int J Tuberc Lung Dis, 5, 339 Cohen, 2012, Mixed-strain mycobacterium tuberculosis infections and the implications for tuberculosis treatment and control, Clin Microbiol Rev, 25, 708, 10.1128/CMR.00021-12 2016 Kim, 2005, Drug-susceptibility testing in tuberculosis: methods and reliability of results, Eur Respir J, 25, 564, 10.1183/09031936.05.00111304 Bastos, 2017, An updated systematic review and meta-analysis for treatment of multidrug-resistant tuberculosis, Eur Respir J, 49, 1600803, 10.1183/13993003.00803-2016 Mugabo, 2015, Do HIV infection and antiretroviral therapy influence multidrug-resistant tuberculosis treatment outcomes?, African J Pharm Pharmacol, 9, 875, 10.5897/AJPP2015.4298 Pietersen, 2014, Long-term outcomes of patients with extensively drug-resistant tuberculosis in South Africa: a cohort study, Lancet, 383, 1230, 10.1016/S0140-6736(13)62675-6 Seung, 2010 van der Heijden, 2017, Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa, Int J Tuberc Lung Dis, 21, 670, 10.5588/ijtld.16.0843 Gegia, 2017, Treatment of isoniazid-resistant tuberculosis with first-line drugs: a systematic review and meta-analysis, Lancet Infect Dis, 17, 223, 10.1016/S1473-3099(16)30407-8 2018 Gurumurthy, 2004, Malabsorption of rifampin and isoniazid in HIV-infected patients with and without tuberculosis, Clin Infect Dis, 38, 280, 10.1086/380795 Muller, 2010, Immune reconstitution inflammatory syndrome in patients starting antiretroviral therapy for HIV infection: a systematic review and meta-analysis, Lancet Infect Dis, 10, 251, 10.1016/S1473-3099(10)70026-8 Burman, 1999, Therapeutic implications of drug interactions in the treatment of human immunodeficiency virus-related tuberculosis, Clin Infect Dis, 28, 419, 10.1086/515174 Gopalan, 2016, Current trends and intricacies in the management of HIV-associated pulmonary tuberculosis, AIDS Res Ther, 13, 34, 10.1186/s12981-016-0118-7 Meintjes, 2014, Management of drug-resistant TB in patients with HIV co-infection, J Int AIDS Soc, 17, 19508, 10.7448/IAS.17.4.19508 Gandhi, 2012, Risk factors for mortality among MDR- and XDR-TB patients in a high HIV prevalence setting, Int J Tuberc Lung Dis, 16, 90, 10.5588/ijtld.11.0153 Seung, 2009, Early outcomes of MDR-TB treatment in a high HIV-prevalence setting in southern Africa, PLoS One, 4, 2, 10.1371/journal.pone.0007186 Merker, 2013, Whole genome sequencing reveals complex evolution patterns of multidrug-resistant Mycobacterium tuberculosis Beijing strains in patients, PLoS One, 8, e82551, 10.1371/journal.pone.0082551 Miotto, 2017, A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis, Eur Respir J, 50, 1701354, 10.1183/13993003.01354-2017