Spatial dynamics of bacterial community in chlorinated drinking water distribution systems supplied with two treatment plants: An integral study of free-living and particle-associated bacteria
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Anderson, 2013, PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: what null hypothesis are you testing?, Ecol. Monogr., 83, 557, 10.1890/12-2010.1
Bashenkhaeva, 2020, Comparative analysis of free–living and particle–associated bacterial communities of Lake Baikal during the ice–covered period, J. Great Lakes Res., 46, 508, 10.1016/j.jglr.2020.03.015
Becerra-Castro, 2016, Proteobacteria become predominant during regrowth after water disinfection, Sci. Total Environ., 573, 313, 10.1016/j.scitotenv.2016.08.054
Beck, 2009, Development of a spot–titer culture assay for quantifying bacteria and viral indicators, J. Rapid Meth. Aut. Mic., 17, 455, 10.1111/j.1745-4581.2009.00182.x
Berney, 2008, Rapid, cultivation–independent assessment of microbial viability in drinking water, Water Res., 42, 4010, 10.1016/j.watres.2008.07.017
Chang, 2019, Antimicrobial resins with quaternary ammonium salts as a supplement to combat the antibiotic resistome in drinking water treatment plants, Chemosphere, 221, 132, 10.1016/j.chemosphere.2019.01.047
Chen, 2020, Assessing the transition effects in a drinking water distribution system caused by changing supply water quality: an indirect approach by characterizing suspended solids, Water Res., 168, 115159, 10.1016/j.watres.2019.115159
Douterelo, 2013, Influence of hydraulic regimes on bacterial community structure and composition in an experimental drinking water distribution system, Water Res., 47, 503, 10.1016/j.watres.2012.09.053
Edgar, 2010, Search and clustering orders of magnitude faster than BLAST, Bioinformatics, 26, 2460, 10.1093/bioinformatics/btq461
Emtiazi, 2004, Investigation of natural biofilms formed during the production of drinking water from surface water embankment filtration, Water Res., 38, 1197, 10.1016/j.watres.2003.10.056
Garneau, 2009, Importance of particle–associated bacterial heterotrophy in a coastal Arctic ecosystem, J. Marine Syst., 75, 185, 10.1016/j.jmarsys.2008.09.002
Haas, 2011, Chimeric 16S rRNA sequence formation and detection in Sanger and 454–pyrosequenced PCR amplicons, Genome Res., 21, 494, 10.1101/gr.112730.110
Hammes, 2010, Assessing biological stability of drinking water without disinfectant residuals in a full–scale water supply system, J. Water Supply Res. T., 59, 31, 10.2166/aqua.2010.052
Hammes, 2008, Flow–cytometric total bacterial cell counts as a descriptive microbiological parameter for drinking water treatment processes, Water Res., 42, 269, 10.1016/j.watres.2007.07.009
Han, 2020, Assessing the impact of source water on tap water bacterial communities in 46 drinking water supply systems in China, Water Res., 172, 115469, 10.1016/j.watres.2020.115469
Ho, 2012, Comparison of drinking water treatment process streams for optimal bacteriological water quality, Water Res., 46, 3934, 10.1016/j.watres.2012.04.041
Hwang, 2009, Evaluation of methods for the extraction of DNA from drinking water distribution system biofilms, Microbes Environ.
Jia, 2017, Stratification of extracellular polymeric substances (EPS) for aggregated anammox microorganisms, Environ. Sci. Technol., 51, 3260, 10.1021/acs.est.6b05761
Jia, 2020, Metagenomic profiling of antibiotic resistance genes and their associations with bacterial community during multiple disinfection regimes in a full–scale drinking water treatment plant, Water Res., 115721
Jia, 2015, Bacterial community shift drives antibiotic resistance promotion during drinking water chlorination, Environ. Sci. Technol., 49, 12271, 10.1021/acs.est.5b03521
Johnson, 2019, Cyanobacteria/microalgae for distillery wastewater treatment–past, present and the future, 195
Knights, 2011, Bayesian community–wide culture–independent microbial source tracking, Nat. Methods, 8, 761, 10.1038/nmeth.1650
Liu, 2019, Dynamics of a microbial community during ensiling and upon aerobic exposure in lactic acid bacteria inoculation–treated and untreated barley silages, Bioresource Technol., 273, 212, 10.1016/j.biortech.2018.10.041
Liu, 2013, Quantification and identification of particle–associated bacteria in unchlorinated drinking water from three treatment plants by cultivation–independent methods, Water Res., 47, 3523, 10.1016/j.watres.2013.03.058
Liu, 2013, Bacteriology of drinking water distribution systems: an integral and multidimensional review, Apply. Microbiol Biot., 97, 9265, 10.1007/s00253-013-5217-y
Liu, 2017, Potential impacts of changing supply–water quality on drinking water distribution: A review, Water Res., 116, 135, 10.1016/j.watres.2017.03.031
Liu, 2018, Assessing the origin of bacteria in tap water and distribution system in an unchlorinated drinking water system by SourceTracker using microbial community fingerprints, Water Res., 138, 86, 10.1016/j.watres.2018.03.043
Liu, 2019, O3–BAC–Cl2: a multi–barrier process controlling the regrowth of opportunistic waterborne pathogens in drinking water distribution systems, J. Environ. Sci., 76, 142, 10.1016/j.jes.2018.04.017
Liu, 2010, Production of Shiga–like toxins in viable but nonculturable Escherichia coli O157: H7, Water Res., 44, 711, 10.1016/j.watres.2009.10.005
Martin, 2011, Cutadapt removes adapter sequences from high–throughput sequencing reads, EMBnet. J., 17, 10, 10.14806/ej.17.1.200
Martiny, 2005, Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system: detection of a large nitrite–oxidizing population associated with Nitrospira spp, Appl. Environ. Microbiol., 71, 8611, 10.1128/AEM.71.12.8611-8617.2005
McCarthy, 2017, Source tracking using microbial community fingerprints: method comparison with hydrodynamic modelling, Water Res., 109, 253, 10.1016/j.watres.2016.11.043
Norton, 2000, A pilot study of bacteriological population changes through potable water treatment and distribution, Appl. Environ. Microbiol., 66, 268, 10.1128/AEM.66.1.268-276.2000
Perrin, 2019, Microbiome of drinking water: A full–scale spatio–temporal study to monitor water quality in the Paris distribution system, Water Res., 149, 375, 10.1016/j.watres.2018.11.013
Potgieter, 2018, Long–term spatial and temporal microbial community dynamics in a large–scale drinking water distribution system with multiple disinfectant regimes, Water Res., 139, 406, 10.1016/j.watres.2018.03.077
Proctor, 2015, Drinking water microbiology—from measurement to management, Curr. Opin. Biotech., 33, 87, 10.1016/j.copbio.2014.12.014
Quast, 2012, The SILVA ribosomal RNA gene database project: improved data processing and web–based tools, Nucleic Acids. Res., 41, D590, 10.1093/nar/gks1219
Rognes, 2016, VSEARCH: a versatile open source tool for metagenomics, PeerJ, 4, e2584, 10.7717/peerj.2584
Schleich, 2019, Mapping dynamics of bacterial communities in a full–scale drinking water distribution system using flow cytometry, Water, 11, 2137, 10.3390/w11102137
Schwartz, 2003, Detection of antibiotic–resistant bacteria and their resistance genes in wastewater, surface water, and drinking water biofilms, FEMS Microbiol. Ecol., 43, 325, 10.1111/j.1574-6941.2003.tb01073.x
Shi, 2013, Metagenomic insights into chlorination effects on microbial antibiotic resistance in drinking water, Water Res., 47, 111, 10.1016/j.watres.2012.09.046
Simoes, 2010, Influence of the diversity of bacterial isolates from drinking water on resistance of biofilms to disinfection, Appl. Environ. Microbiol., 76, 6673, 10.1128/AEM.00872-10
Soni, 2008, Zeta potential of selected bacteria in drinking water when dead, starved, or exposed to minimal and rich culture media, Curr. Microbial., 56, 93, 10.1007/s00284-007-9046-z
Wang, 2018, Sulfadiazine/ciprofloxacin promote opportunistic pathogens occurrence in bulk water of drinking water distribution systems, Environ. Pollut., 234, 71, 10.1016/j.envpol.2017.11.050
Wang, 2007, Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy, Appl. Environ. Microbiol., 73, 5261, 10.1128/AEM.00062-07
Wickham, 2016
Young, 2006, The selective value of bacterial shape, Microbiol. Mol. Boil. R., 70, 660, 10.1128/MMBR.00001-06
Zhang, 2019, New insights into sediment transport in interconnected river–lake systems through tracing microorganisms, Environ. Sci. Technol., 53, 4099, 10.1021/acs.est.8b07334