Identification and profiling of Manduca sexta microRNAs and their possible roles in regulating specific transcripts in fat body, hemocytes, and midgut
Tài liệu tham khảo
Asgari, 2011, Role of MicroRNAs in insect host-microorganism interactions, Front. Physiol., 2, 48, 10.3389/fphys.2011.00048
Baker, 2007, Diabetic larvae and obese flies-emerging studies of metabolism in Drosophila, Cell. Metab., 6, 257, 10.1016/j.cmet.2007.09.002
Chawla, 2011, MicroRNAs in Drosophila development, Int. Rev. Cell. Mol. Biol., 286, 1, 10.1016/B978-0-12-385859-7.00001-X
Choi, 2012, Conserved microRNA miR-8 in fat body regulates innate immune homeostasis in Drosophila, Dev. Comp. Immunol., 37, 50, 10.1016/j.dci.2011.12.008
Courteau, 2012, Differential expression of microRNA species in a freeze tolerant insect, Eurosta solidaginis, Cryobiology, 65, 210, 10.1016/j.cryobiol.2012.06.005
Davalos, 2011, miR-33a/b contribute to the regulation of fatty acid metabolism and insulin signaling, Proc. Natl. Acad. Sci. U. S. A., 108, 9232, 10.1073/pnas.1102281108
Etebari, 2013, Conserved microRNA miR-8 blocks activation of the toll pathway by upregulating Serpin 27 transcripts, RNA Biol., 10, 1356, 10.4161/rna.25481
Etebari, 2013, Identification of microRNAs from Plutella xylostella larvae associated with parasitization by Diadegma semiclausum, Insect Biochem Mol. Biol., 43, 309, 10.1016/j.ibmb.2013.01.004
Freitak, 2012, Gender- and stressor-specific microRNA expression in Tribolium castaneum, Biol. Lett., 8, 860, 10.1098/rsbl.2012.0273
Gahan, 2010, An ABC transporter mutation is correlated with insect resistance to Bacillus thuringiensis Cry1Ac toxin, Plos Genet., 6, 10.1371/journal.pgen.1001248
Grabherr, 2011, Full-length transcriptome assembly from RNA-Seq data without a reference genome, Nat. Biotechnol., 29, 10.1038/nbt.1883
Gunaratna, 2013, A comprehensive analysis of the Manduca sexta immunotranscriptome, Dev. Comp. Immunol., 39, 388, 10.1016/j.dci.2012.10.004
Hakimi, 2011, Apicomplexan parasites and subversion of the host cell microRNA pathway, Trends Parasitol., 27, 481, 10.1016/j.pt.2011.07.001
Hiruma, 2010, Developmental expression of mRNAs for epidermal and fat body proteins and hormonally regulated transcription factors in the tobacco hornworm, Manduca sexta, J. Insect Physiol., 56, 1390, 10.1016/j.jinsphys.2010.03.029
Hyun, 2009, Conserved MicroRNA miR-8/miR-200 and its target USH/FOG2 control growth by regulating PI3K, Cell, 139, 1096, 10.1016/j.cell.2009.11.020
Li, 2011, RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome, Bmc Bioinforma., 12, 10.1186/1471-2105-12-323
Li, 2012, Control of mitochondrial activity by miRNAs, J. Cell. Biochem., 113, 1104, 10.1002/jcb.24004
Li, 2012, miRNA arm selection and isomiR distribution in gastric cancer, Bmc Genomics, 13, 10.1186/1471-2164-13-S1-S13
Likitvivatanavong, 2011, Cadherin, Alkaline Phosphatase, and Aminopeptidase N as receptors of Cry11Ba Toxin from Bacillus thuringiensis subsp. jegathesan in Aedes aegypti, Appl. Environ. Microbiol., 77, 24, 10.1128/AEM.01852-10
Lourenco, 2013, Bacterial infection activates the immune system response and dysregulates microRNA expression in honey bees, Insect Biochem Molec., 43, 474, 10.1016/j.ibmb.2013.03.001
Lyons, 2013, CryomiRs: towards the identification of a cold-associated family of microRNAs, Comp. Biochem Physiol. Part D. Genomics Proteomics, 8, 358, 10.1016/j.cbd.2013.10.001
Lyons, 2013, Identification of differentially regulated micrornas in cold-hardy insects, Cryo. Lett., 34, 83
Marco, 2010, Functional shifts in insect microRNA evolution, Genome Biol. Evol., 2, 686, 10.1093/gbe/evq053
Pauchet, 2010, Pyrosequencing the Manduca sexta larval midgut transcriptome: messages for digestion, detoxification and defence, Insect Mol. Biol., 19, 61, 10.1111/j.1365-2583.2009.00936.x
Saeed, 2003, TM4: a free, open-source system for microarray data management and analysis, Biotechniques, 34, 374, 10.2144/03342mt01
Stanley, 2009, Eicosanoid actions in insect immunity, J. Innate Immun., 1, 282, 10.1159/000210371
Tang, 2010, RNA interference and its applications on silencing of insecticide-resistant genes in insects, Cotton Sci., 22, 617
Zhang, 2011, Pyrosequencing-based expression profiling and identification of differentially regulated genes from Manduca sexta, a lepidopteran model insect, Insect Biochem Mol. Biol., 41, 733, 10.1016/j.ibmb.2011.05.005
Zhang, 2012, Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta, Insect Biochem Mol. Biol., 42, 381, 10.1016/j.ibmb.2012.01.006
Zhang, 2014, Identification of conserved and novel microRNAs in Manduca sexta and their possible roles in the expression regulation of immunity-related genes, Insect Biochem Mol. Biol., 47, 12, 10.1016/j.ibmb.2014.01.008
Zheng, 2010, Animal microRNA target prediction using diverse sequence-specific determinants, J. Bioinforma. Comput. Biol., 8, 763, 10.1142/S0219720010004896
Zou, 2008, Pyrosequence analysis of expressed sequence tags for Manduca sexta hemolymph proteins involved in immune responses, Insect Biochem Mol. Biol., 38, 677, 10.1016/j.ibmb.2008.03.009
Zuker, 2003, Mfold web server for nucleic acid folding and hybridization prediction, Nucleic Acids Res., 31, 3406, 10.1093/nar/gkg595