Spectroscopic studies of the effects of anticancer drug mitoxantrone interaction with calf-thymus DNA

Shweta Agarwal1, Deepak Kumar Jangir1, Ranjana Mehrotra1
1Quantum Optics and Photon Physics, CSIR-National Physical Laboratory, Dr. K.S. Krishnan Marg, New Delhi 110012, India

Tài liệu tham khảo

W.K. Lee, J.H. Na, G. Yu, Interaction between an intrinsically unstructured protein, Nopp140, and mitoxantrone, Annual meeting of Korea Biophysical society in Convention Hall, Seoul, South Korea, 2009. Hajihassan, 2011, Interaction of mitoxantrone as an anticancer drug with chromatin proteins, core histones and H1 in solution, Int. J. Biol. Macromol., 48, 87, 10.1016/j.ijbiomac.2010.10.002 Hajihassan, 2009, Studies on the binding affinity of anticancer drug mitoxantrone to chromatin, DNA and histone proteins, J. Biom. Sci., 16, 31, 10.1186/1423-0127-16-31 Parker, 2004, A molecular understanding of mitoxantrone–DNA adduct formation-effect of cytosine methylation and flanking sequences, J. Biol. Chem., 279, 18814, 10.1074/jbc.M400931200 Panousis, 1994, DNA sequence specificity of mitoxantrone, Nucl. Acids Res., 22, 1342, 10.1093/nar/22.8.1342 Parker, 2000, Formaldehyde activation of mitoxantrone yields CpG and CpA specific DNA adducts, Nucl. Acid Res., 28, 982, 10.1093/nar/28.4.982 Skladanowski, 2000, Mitoxantrone and ametantrone induce interstrand cross-links in DNA of tumor cells, Brit. J. Cancer, 82, 1300, 10.1054/bjoc.1999.1095 Chen, 1986, A theoretical investigation on the sequence selective binding of mitoxantrone to double-stranded tetra nucleotides, Nucl. Acids Res., 14, 3799, 10.1093/nar/14.9.3799 Varadwaj, 2010, Mitoxantrone: an agent with promises for anticancer therapies, Elect. J. Biol., 6, 36 Stuve, 2004, Mitoxantrone as a potential therapy for primary progressive multiple sclerosis, Mult. Scler., 10, 58, 10.1191/1352458504ms1032oa Froehlich, 2009, Study of DNA interactions with steroidal and nonsteroidal estrogen–platinum (II)-based anticancer drugs, DNA Cell Biol., 28, 31, 10.1089/dna.2008.0804 Martin, 2003, Attenuated total reflection IR spectroscopy as a tool to investigate the orientation and tertiary structure changes in fusion proteins, Biochem. Biophys. Acta, 1614, 97, 10.1016/S0005-2736(03)00167-6 Kazarian, 2006, Applications of ATR–FTIR spectroscopic imaging to biomedical samples, Biochem. Biophys. Acta, 1758, 858, 10.1016/j.bbamem.2006.02.011 Nafisi, 2005, Interaction of arsenic trioxide As2O3 with DNA and RNA, DNA Cell Biol., 10, 634, 10.1089/dna.2005.24.634 Marty, 2004, AZT–DNA interaction, DNA Cell Biol., 23, 135, 10.1089/104454904322964724 N’soukpoé-Kossi, 2008, Transfer RNA bindings to antitumor estradiol–platinum (II) hybrid and cisplatin, DNA Cell Biol., 27, 337, 10.1089/dna.2008.0727 Lee, 1993, Vibrational dynamics of wet-spun films of the Na DNA-netropsin complex: a Raman and infrared study, Phy. Rev. E Stat. Phys. Plasmas Fluids Relat. Interdiscip. Topics, 48, 2240 Chen, 1997, Effect of drug-binding-induced deformation on the vibrational spectrum of a DNA–daunomycin complex, Phys. Rev. E, 55, 7414, 10.1103/PhysRevE.55.7414 Jangir, 2010, Carboplatin interaction with calf thymus DNA: a FTIR spectroscopic approach, J. Mol. Struct., 969, 126, 10.1016/j.molstruc.2010.01.052 Glasel, 1995, Validity of nucleic acid purities monitored by 260 nm/280 nm absorbance ratios, BioTechniques, 18, 62 Vijayalakshmi, 2000, DNA cleavage of by a chromium (III) complex, Biochem. Biophys. Res. Commun., 731, 10.1006/bbrc.2000.2707 Alex, 1989, FTIR and Raman investigation of cadmium binding by DNA, Inorg. Chim. Acta, 157, 271, 10.1016/S0020-1693(00)80552-6 Kanakis, 2009, An overview of structural features of DNA and RNA complexes with saffron compounds: models and antioxidant activity, J. Photochem. Photobiol. B: Biol., 95, 204, 10.1016/j.jphotobiol.2009.03.006 Connors, 1987, Optical absorption spectroscopy, 141 Taillandier, 1992, Infrared spectroscopy of DNA, Methods in Enzymology., 211, 307, 10.1016/0076-6879(92)11018-E Loprete, 1993, Conditions for the stability of the B, C, and Z structural forms of poly (dG–dC) in the presence of lithium, potassium, magnesium, calcium and zinc cations, Biochemistry, 32, 4077, 10.1021/bi00066a032 Ouameur, 2004, Structural analysis of DNA interactions with biogenic polyamines and cobalt (III) hexamine studied by Fourier transform infrared and capillary electrophoresis, J. Biol. Chem., 279, 42041, 10.1074/jbc.M406053200 Andrushchenko, 2002, Vibrational CD (VCD) and atomic force microscopy (AFM) study of DNA interaction with Cr3+ ions: VCD and AFM evidence of DNA condensation, Biopolymers, 61, 243, 10.1002/bip.10159 Rohs, 2009, The role of DNA shape in protein – DNA recognition, Nature, 461, 1248, 10.1038/nature08473 Jangir, 2011, FTIR and circular dichroism spectroscopic study of interaction of 5-fluorouracil with DNA, J. Photochem. Photobiol. B: Biol, 105, 143, 10.1016/j.jphotobiol.2011.08.003 Tsuboi, 1969, Application of infrared spectroscopy to structure studies of nucleic acids, Appl. Spectrosc. Rev., 3, 45, 10.1080/05704927008081687 Banyaya, 2003, A library of IR bands of nucleic acids in solution, Biophys. Chem., 104, 477, 10.1016/S0301-4622(03)00035-8 Nejedly, 2005, Mapping the B–A conformational transition along plasmid DNA, Nucl. Acids Res., 33, 1 Vorlícková, 1995, Conformational transitions of alternating purine–pyrimidine DNAs in perchlorate ethanol solutions, Biophys J., 69, 2033, 10.1016/S0006-3495(95)80073-1 Kypr, 2002, Circular dichroism spectroscopy reveals invariant conformation of guanine runs in DNA, Biopolymers (Biospectroscopy), 67, 275, 10.1002/bip.10112 Kolodziejczyk, 1988, Circular dichroism study of the interaction of Mitoxantrone, ametantrone and their Pd (II) complexes with deoxyribonucleic acid, Biochim. Biophys. Acta, 926, 249, 10.1016/0304-4165(87)90210-8 Hajian, 2012, Interaction of anticancer drug methotrexate with ds-DNA analyzed by spectroscopic and electrochemical methods, E-J. Chem., 9, 471, 10.1155/2012/378674 Wang, 2008, Interactions of mitoxantrone with duplex and triplex DNA studied by electrospray ionization mass spectrometry, Rapid Commun. Mass Spectrum., 24, 4043 Jangir, 2012, Assessment of amsacrine binding with DNA using UV–Visible, circular dichroism and Raman spectroscopic techniques, J. Photochem. Photobiol. B: Biol., 114, 38, 10.1016/j.jphotobiol.2012.05.005 Shah, 2010, Electrochemical behavior of 1-ferrocenyl-3-phenyl-2-propen-1-one on glassy carbon electrode and evaluation of its interaction parameters with DNA, J. Braz. Chem. Soc., 21, 447, 10.1590/S0103-50532010000300008 Lia, 2005, Interaction of anticancer drug mitoxantrone with DNA analyzed by electrochemical and spectroscopic methods, Biophys. Chem., 116, 199, 10.1016/j.bpc.2005.04.009 Lown, 1985, High field 1H-NMR analysis of the 1:1 intercalation complex of the antitumor agent mitoxantrone and the DNA duplex [d(CpGpCpG)]2, J. Biomol. Str. Dynam., 6, 1097, 10.1080/07391102.1985.10507626 Zhu, 2004, Atomic force microscopy studies on DNA structural changes induced by vincristine sulfate and aspirin, Microsc. Microanal., 10, 286, 10.1017/S1431927604040127 Tyagi, 2010, DNA interaction studies of an anticancer plant alkaloid, vincristine using Fourier transform infrared spectroscopy, DNA Cell Biol., 29, 693, 10.1089/dna.2010.1035