RNF8-Dependent Histone Modifications Regulate Nucleosome Removal during Spermatogenesis
Tài liệu tham khảo
Akhtar, 2000, Activation of transcription through histone H4 acetylation by MOF, an acetyltransferase essential for dosage compensation in Drosophila, Mol. Cell, 5, 367, 10.1016/S1097-2765(00)80431-1
Allfrey, 1968, Histone acetylation in insect chromosomes, Science, 159, 314, 10.1126/science.159.3812.314
Baarends, 1999, Histone ubiquitination and chromatin remodeling in mouse spermatogenesis, Dev. Biol., 207, 322, 10.1006/dbio.1998.9155
Baarends, 2005, Silencing of unpaired chromatin and histone H2A ubiquitination in mammalian meiosis, Mol. Cell. Biol., 25, 1041, 10.1128/MCB.25.3.1041-1053.2005
Bergink, 2006, DNA damage triggers nucleotide excision repair-dependent monoubiquitylation of histone H2A, Genes Dev., 20, 1343, 10.1101/gad.373706
Bhaumik, 2007, Covalent modifications of histones during development and disease pathogenesis, Nat. Struct. Mol. Biol., 14, 1008, 10.1038/nsmb1337
Braun, 1998, Post-transcriptional control of gene expression during spermatogenesis, Semin. Cell Dev. Biol., 9, 483, 10.1006/scdb.1998.0226
Briggs, 2002, Gene silencing: trans-histone regulatory pathway in chromatin, Nature, 418, 498, 10.1038/nature00970
Cao, 2005, Role of Bmi-1 and Ring1A in H2A ubiquitylation and Hox gene silencing, Mol. Cell, 20, 845, 10.1016/j.molcel.2005.12.002
Chen, 1998, Ubiquitination of histone H3 in elongating spermatids of rat testes, J. Biol. Chem., 273, 13165, 10.1074/jbc.273.21.13165
Cho, 2001, Haploinsufficiency of protamine-1 or −2 causes infertility in mice, Nat. Genet., 28, 82, 10.1038/ng0501-82
de Napoles, 2004, Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation, Dev. Cell, 7, 663, 10.1016/j.devcel.2004.10.005
Dion, 2005, Genomic characterization reveals a simple histone H4 acetylation code, Proc. Natl. Acad. Sci. USA, 102, 5501, 10.1073/pnas.0500136102
Doil, 2009, RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins, Cell, 136, 435, 10.1016/j.cell.2008.12.041
Fernandez-Capetillo, 2003, H2AX is required for chromatin remodeling and inactivation of sex chromosomes in male mouse meiosis, Dev. Cell, 4, 497, 10.1016/S1534-5807(03)00093-5
Fleming, 2008, H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation, Mol. Cell, 31, 57, 10.1016/j.molcel.2008.04.025
Govin, 2007, Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis, J. Cell Biol., 176, 283, 10.1083/jcb.200604141
Gupta, 2005, Involvement of human MOF in ATM function, Mol. Cell. Biol., 25, 5292, 10.1128/MCB.25.12.5292-5305.2005
Gupta, 2008, The mammalian ortholog of Drosophila MOF that acetylates histone H4 lysine 16 is essential for embryogenesis and oncogenesis, Mol. Cell. Biol., 28, 397, 10.1128/MCB.01045-07
Hilfiker, 1997, mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila, EMBO J., 16, 2054, 10.1093/emboj/16.8.2054
Huen, 2007, RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly, Cell, 131, 901, 10.1016/j.cell.2007.09.041
Ito, 2001, N-Terminally extended human ubiquitin-conjugating enzymes (E2s) mediate the ubiquitination of RING-finger proteins, ARA54 and RNF8, Eur. J. Biochem., 268, 2725, 10.1046/j.1432-1327.2001.02169.x
Jason, 2002, Histone ubiquitination: a tagging tail unfolds?, Bioessays, 24, 166, 10.1002/bies.10038
Khalil, 2004, Dynamic histone modifications mark sex chromosome inactivation and reactivation during mammalian spermatogenesis, Proc. Natl. Acad. Sci. USA, 101, 16583, 10.1073/pnas.0406325101
Kimura, 1995, Intracytoplasmic sperm injection in the mouse, Biol. Reprod., 52, 709, 10.1095/biolreprod52.4.709
Kirmizis, 2007, Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation, Nature, 449, 928, 10.1038/nature06160
Kolas, 2007, Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase, Science, 318, 1637, 10.1126/science.1150034
Kornberg, 1974, Chromatin structure; oligomers of the histones, Science, 184, 865, 10.1126/science.184.4139.865
Lawrence, 1994, The RAD6 DNA repair pathway in Saccharomyces cerevisiae: what does it do, and how does it do it?, Bioessays, 16, 253, 10.1002/bies.950160408
Leduc, 2008, DNA damage response during chromatin remodeling in elongating spermatids of mice, Biol. Reprod., 78, 324, 10.1095/biolreprod.107.064162
Lee, 2007, Histone crosstalk between H2B monoubiquitination and H3 methylation mediated by COMPASS, Cell, 131, 1084, 10.1016/j.cell.2007.09.046
Lee, 2007, Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination, Science, 318, 447, 10.1126/science.1149042
Li, 2007, The role of chromatin during transcription, Cell, 128, 707, 10.1016/j.cell.2007.01.015
Lohr, 1977, Quantitative analysis of the digestion of yeast chromatin by staphylococcal nuclease, Biochemistry, 16, 463, 10.1021/bi00622a020
Lu, 2008, Polo-like kinase 1 is essential for early embryonic development and tumor suppression, Mol. Cell. Biol., 28, 6870, 10.1128/MCB.00392-08
Luger, 1997, Crystal structure of the nucleosome core particle at 2.8 A resolution, Nature, 389, 251, 10.1038/38444
Mailand, 2007, RNF8 ubiquitylates histones at DNA double-strand breaks and promotes assembly of repair proteins, Cell, 131, 887, 10.1016/j.cell.2007.09.040
Martin, 2007, Mechanisms of epigenetic inheritance, Curr. Opin. Cell Biol., 19, 266, 10.1016/j.ceb.2007.04.002
McGinty, 2008, Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation, Nature, 453, 812, 10.1038/nature06906
Meistrich, 1992, Highly acetylated H4 is associated with histone displacement in rat spermatids, Mol. Reprod. Dev., 31, 170, 10.1002/mrd.1080310303
Meistrich, 2003, Roles of transition nuclear proteins in spermiogenesis, Chromosoma, 111, 483, 10.1007/s00412-002-0227-z
Minsky, 2008, Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells, Nat. Cell Biol., 10, 483, 10.1038/ncb1712
Nair, 2008, Nuclear regulator Pygo2 controls spermiogenesis and histone H3 acetylation, Dev. Biol., 320, 446, 10.1016/j.ydbio.2008.05.553
Namekawa, 2006, Postmeiotic sex chromatin in the male germline of mice, Curr. Biol., 16, 660, 10.1016/j.cub.2006.01.066
Nicassio, 2007, Human USP3 is a chromatin modifier required for S phase progression and genome stability, Curr. Biol., 17, 1972, 10.1016/j.cub.2007.10.034
Okada, 2007, Histone demethylase JHDM2A is critical for Tnp1 and Prm1 transcription and spermatogenesis, Nature, 450, 119, 10.1038/nature06236
Oliva, 2006, Protamines and male infertility, Hum. Reprod. Update, 12, 417, 10.1093/humupd/dml009
Oliva, 1991, Vertebrate protamine genes and the histone-to-protamine replacement reaction, Prog. Nucleic Acid Res. Mol. Biol., 40, 25, 10.1016/S0079-6603(08)60839-9
Pavri, 2006, Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II, Cell, 125, 703, 10.1016/j.cell.2006.04.029
Peters, 1997, A drying-down technique for the spreading of mammalian meiocytes from the male and female germline, Chromosome Res., 5, 66, 10.1023/A:1018445520117
Pivot-Pajot, 2003, Acetylation-dependent chromatin reorganization by BRDT, a testis-specific bromodomain-containing protein, Mol. Cell. Biol., 23, 5354, 10.1128/MCB.23.15.5354-5365.2003
Reinke, 2003, Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter, Mol. Cell, 11, 1599, 10.1016/S1097-2765(03)00186-2
Richler, 1994, Splicing components are excluded from the transcriptionally inactive XY body in male meiotic nuclei, Mol. Biol. Cell, 5, 1341, 10.1091/mbc.5.12.1341
Robzyk, 2000, Rad6-dependent ubiquitination of histone H2B in yeast, Science, 287, 501, 10.1126/science.287.5452.501
Roest, 1996, Inactivation of the HR6B ubiquitin-conjugating DNA repair enzyme in mice causes male sterility associated with chromatin modification, Cell, 86, 799, 10.1016/S0092-8674(00)80154-3
Russell, 1990
Ruthenburg, 2007, Multivalent engagement of chromatin modifications by linked binding modules, Nat. Rev. Mol. Cell Biol., 8, 983, 10.1038/nrm2298
Sakasai, 2008, RNF8-dependent and RNF8-independent regulation of 53BP1 in response to DNA damage, J. Biol. Chem., 283, 13549, 10.1074/jbc.M710197200
Shahbazian, 2007, Functions of site-specific histone acetylation and deacetylation, Annu. Rev. Biochem., 76, 75, 10.1146/annurev.biochem.76.052705.162114
Shema, 2008, The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression, Genes Dev., 22, 2664, 10.1101/gad.1703008
Shirley, 2004, Abnormalities and reduced reproductive potential of sperm from Tnp1- and Tnp2-null double mutant mice, Biol. Reprod., 71, 1220, 10.1095/biolreprod.104.029363
Shogren-Knaak, 2006, Histone H4-K16 acetylation controls chromatin structure and protein interactions, Science, 311, 844, 10.1126/science.1124000
Smith, 2003, Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4, Anal. Biochem., 316, 23, 10.1016/S0003-2697(03)00032-0
Smith, 2005, A human protein complex homologous to the Drosophila MSL complex is responsible for the majority of histone H4 acetylation at lysine 16, Mol. Cell. Biol., 25, 9175, 10.1128/MCB.25.21.9175-9188.2005
Sonnack, 2002, Expression of hyperacetylated histone H4 during normal and impaired human spermatogenesis, Andrologia, 34, 384, 10.1046/j.1439-0272.2002.00524.x
Stewart, 2009, The RIDDLE syndrome protein mediates a ubiquitin-dependent signaling cascade at sites of DNA damage, Cell, 136, 420, 10.1016/j.cell.2008.12.042
Sun, 2002, Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast, Nature, 418, 104, 10.1038/nature00883
Taipale, 2005, hMOF histone acetyltransferase is required for histone H4 lysine 16 acetylation in mammalian cells, Mol. Cell. Biol., 25, 6798, 10.1128/MCB.25.15.6798-6810.2005
Tanphaichitr, 1978, Basic nuclear proteins in testicular cells and ejaculated spermatozoa in man, Exp. Cell Res., 117, 347, 10.1016/0014-4827(78)90148-9
Thomas, 2007, The genes coding for the MYST family histone acetyltransferases, Tip60 and Mof, are expressed at high levels during sperm development, Gene Expr. Patterns, 7, 657, 10.1016/j.modgep.2007.03.005
Thomas, 2008, Mof (MYST1 or KAT8) is essential for progression of embryonic development past the blastocyst stage and required for normal chromatin architecture, Mol. Cell. Biol., 28, 5093, 10.1128/MCB.02202-07
Turner, 2007, Meiotic sex chromosome inactivation, Development, 134, 1823, 10.1242/dev.000018
Turner, 1992, Histone H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei, Cell, 69, 375, 10.1016/0092-8674(92)90417-B
Turner, 2004, BRCA1, histone H2AX phosphorylation, and male meiotic sex chromosome inactivation, Curr. Biol., 14, 2135, 10.1016/j.cub.2004.11.032
Turner, 2005, Silencing of unsynapsed meiotic chromosomes in the mouse, Nat. Genet., 37, 41, 10.1038/ng1484
van der Heijden, 2006, Transmission of modified nucleosomes from the mouse male germline to the zygote and subsequent remodeling of paternal chromatin, Dev. Biol., 298, 458, 10.1016/j.ydbio.2006.06.051
Vidanes, 2005, Complicated tails: histone modifications and the DNA damage response, Cell, 121, 973, 10.1016/j.cell.2005.06.013
Wang, 2007, Ubc13/Rnf8 ubiquitin ligases control foci formation of the Rap80/Abraxas/Brca1/Brcc36 complex in response to DNA damage, Proc. Natl. Acad. Sci. USA, 104, 20759, 10.1073/pnas.0710061104
Wang, 2004, Role of histone H2A ubiquitination in Polycomb silencing, Nature, 431, 873, 10.1038/nature02985
Weake, 2008, Histone ubiquitination: triggering gene activity, Mol. Cell, 29, 653, 10.1016/j.molcel.2008.02.014
West, 1980, Histone 2B can be modified by the attachment of ubiquitin, Nucleic Acids Res., 8, 4671, 10.1093/nar/8.20.4671
Williams, 2008, Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation, Proc. Natl. Acad. Sci. USA, 105, 9000, 10.1073/pnas.0800057105
Wood, 2005, Cross-talking histones: implications for the regulation of gene expression and DNA repair, Biochem. Cell Biol., 83, 460, 10.1139/o05-116
Wu, 2000, Spermiogenesis and exchange of basic nuclear proteins are impaired in male germ cells lacking Camk4, Nat. Genet., 25, 448, 10.1038/78153
Wu, 2009, Histone ubiquitination associates with BRCA1-dependent DNA damage response, Mol. Cell. Biol., 29, 849, 10.1128/MCB.01302-08
Zhao, 2004, Transition nuclear proteins are required for normal chromatin condensation and functional sperm development, Genesis, 38, 200, 10.1002/gene.20019
Zhao, 2007, A critical role for the ubiquitin-conjugating enzyme Ubc13 in initiating homologous recombination, Mol. Cell, 25, 663, 10.1016/j.molcel.2007.01.029
Zhu, 2005, Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation, Mol. Cell, 20, 601, 10.1016/j.molcel.2005.09.025