MOLMOL: A program for display and analysis of macromolecular structures

Wüthrich, 1986 Ferrin, 1988, The MIDAS display system, J. Mol. Graphics, 6, 13, 10.1016/0263-7855(88)80054-7 Jones, 1991, Improved methods for building protein models in electron density and location of errors in these models, Acta Crystallogr., A47, 110, 10.1107/S0108767390010224 Sayle, 1995, RASMOL: Biomolecular graphics for all, Trends Biochem. Sci., 20, 374, 10.1016/S0968-0004(00)89080-5 McCammon, 1987 Heller, 1994 Silicon Graphic Incorporated, 1993 Nye, 1992 Billeter, 1985, Interactive program for investigation of protein structures based on 1H NMR experiments, J. Mol. Graphics, 3, 79, 10.1016/0263-7855(85)80014-X Billeter, 1985, Interactive program for investigation of protein structures based on 1H NMR experiments, J. Mol. Graphics, 3, 97, 10.1016/0263-7855(85)80014-X Adobe Systems Incorporated, 1985 Frame Technology International Ltd, 1991 Aldus Developers Desk, 1992 Weiler, 1977, Hidden surface removal using polygon area sorting, 214 Foley, 1990, Computer Graphics: Principles and Practice, 689 Sedgewick, 1988, Algorithms, 380 Richardson, 1981, The anatomy and taxonomy of protein structure, Adv. Protein Chem., 34, 167, 10.1016/S0065-3233(08)60520-3 Kabsch, 1983, Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features, Biopolymers, 22, 2577, 10.1002/bip.360221211 Kraulis, 1991, MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures, J. Appl. Crystallogr., 24, 946, 10.1107/S0021889891004399 Kirkpatrick, 1983, Optimization by simulated annealing, Science, 220, 671, 10.1126/science.220.4598.671 Lee, 1971, The interpretation of protein structure: Estimation of static accessibility, J. Mol. Biol., 55, 379, 10.1016/0022-2836(71)90324-X Richards, 1977, Areas, volumes, packing, and protein structure, Annu. Rev. Biophys. Bioeng., 6, 151, 10.1146/annurev.bb.06.060177.001055 Connolly, 1983, Analytical molecular surface calculation, J. Appl. Crystallogr., 16, 548, 10.1107/S0021889883010985 Halperin, 1994, Spheres, Molecules, and Hidden Surface Removal Lorenson, 1987, Marching cubes: a high resolution 3D surface construction algorithm, 163 Ning, 1993, An evaluation of implicit surface tilers, IEEE Computer Graphics and Applications, 13, 33, 10.1109/38.252552 Ottiger, 1994, The NMR solution structure of the pheromone Er-2 from the ciliated protozoan Euplotes raikovi, Protein Sci., 3, 1515, 10.1002/pro.5560030917 McLachlan, 1979, Gene duplication in the structural evolution of chymotrypsin. Appendix: Least square fitting of two structures, J. Mol. Biol., 128, 49, 10.1016/0022-2836(79)90308-5 Billeter, 1992, Comparison of protein structures determined by NMR in solution and by X-ray diffraction in single crystals, Q. Rev. Biophys., 25, 325, 10.1017/S0033583500004261 Widmer, 1989, Three-dimensional structure of the neurotoxin ATX Ia from Anemonia sulcata in aqueous solution determined by nuclear magnetic resonance spectroscopy, Proteins, 6, 357, 10.1002/prot.340060403 Ramachandran, 1968, Conformation of polypeptides and proteins, Adv. Protein Chem., 23, 283, 10.1016/S0065-3233(08)60402-7 Billeter, M., Güntert, P., Luginbühl, P., and Wüthrich, K. Hydration and DNA recognition by homeodomains. Submitted. Bushweller, 1994, The nuclear magnetic resonance solution structure of the mixed disulfide between Escherichia coli glutaredoxin(C14S) and glutathione, J. Mol. Biol., 235, 1585, 10.1006/jmbi.1994.1108 Billeter, 1993, Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex, J. Mol. Biol., 234, 1084, 10.1006/jmbi.1993.1661 Berndt, 1992, Determination of a high-quality nuclear magnetic resonance solution structure of the bovine pancreatic trypsin inhibitor and comparison with three crystal structures, J. Mol. Biol., 227, 757, 10.1016/0022-2836(92)90222-6 Hobohm, 1992, Selection of representative protein data sets, Protein Sci., 1, 409, 10.1002/pro.5560010313