Plant Development Is Regulated by a Family of Auxin Receptor F Box Proteins

Adai, 2005, Computational prediction of miRNAs in Arabidopsis thaliana, Genome Res., 15, 78, 10.1101/gr.2908205

Berleth, 1993, The role of the monopteros gene in organising the basal body region of the Arabidopsis embryo, Development, 118, 575, 10.1242/dev.118.2.575

Davies, 1995, The plant hormones: their nature, occurrence and functions, 1

Dharmasiri, 2004, Auxin signaling and regulated protein degradation, Trends Plant Sci., 9, 302, 10.1016/j.tplants.2004.04.003

Dharmasiri, 2003, Auxin action in a cell-free system, Curr. Biol., 13, 1418, 10.1016/S0960-9822(03)00536-0

Dharmasiri, 2005, The F-box protein TIR1 is an auxin receptor, Nature, 435, 441, 10.1038/nature03543

Friml, 2003, Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis, Nature, 426, 147, 10.1038/nature02085

Gagne, 2002, The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis, Proc. Natl. Acad. Sci. USA, 99, 11519, 10.1073/pnas.162339999

Gray, 1999, Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana, Genes Dev., 13, 1678, 10.1101/gad.13.13.1678

Gray, 2001, Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins, Nature, 414, 271, 10.1038/35104500

Hagen, 2002, Auxin-responsive gene expression: genes, promoters and regulatory factors, Plant Mol. Biol., 49, 373, 10.1023/A:1015207114117

Hamann, 1999, The auxin-insensitive bodenlos mutation affects primary root formation and apical-basal patterning in the Arabidopsis embryo, Development, 126, 1387, 10.1242/dev.126.7.1387

Hamann, 2002, The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning, Genes Dev., 16, 1610, 10.1101/gad.229402

Hardtke, 1998, The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development, EMBO J., 17, 1405, 10.1093/emboj/17.5.1405

Hardtke, 2004, Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4, Development, 131, 1089, 10.1242/dev.00925

Harper, 2000, The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue, Plant Cell, 12, 757, 10.1105/tpc.12.5.757

Hellens, 2000, pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation, Plant Mol. Biol., 42, 819, 10.1023/A:1006496308160

Jones-Rhoades, 2004, Computational identification of plant microRNAs and their targets, including a stress-induced miRNA, Mol. Cell, 14, 787, 10.1016/j.molcel.2004.05.027

Kepinski, 2005, The Arabidopsis TIR1 protein is an auxin receptor, Nature, 435, 446, 10.1038/nature03542

Kim, 1997, Protein-protein interactions among the Aux/IAA proteins, Proc. Natl. Acad. Sci. USA, 94, 11786, 10.1073/pnas.94.22.11786

Leyser, 2002, Molecular genetics of auxin signaling, Annu. Rev. Plant Biol., 53, 377, 10.1146/annurev.arplant.53.100301.135227

Li, 2004, Convergence of signaling pathways in the control of differential cell growth in Arabidopsis, Dev. Cell, 7, 193, 10.1016/j.devcel.2004.07.002

Liscum, 2002, Genetics of Aux/IAA and ARF action in plant growth and development, Plant Mol. Biol., 49, 387, 10.1023/A:1015255030047

Okushima, 2005, Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19, Plant Cell, 17, 444, 10.1105/tpc.104.028316

Ouellet, 2001, IAA17/AXR3. Biochemical insight into an auxin mutant phenotype, Plant Cell, 13, 829, 10.1105/tpc.13.4.829

Park, 2002, Mutation in domain II of IAA1 confers diverse auxin-related phenotypes and represses auxin-activated expression of Aux/IAA genes in steroid regulator-inducible system, Plant J., 32, 669, 10.1046/j.1365-313X.2002.01459.x

Ramos, 2001, Rapid degradation of Aux/IAA proteins requires conserved amino acides of domain II and is proteasome-dependent, Plant Cell, 13, 2349, 10.1105/tpc.010244

Reed, 2001, Roles and activities of Aux/IAA proteins in Arabidopsis, Trends Plant Sci., 6, 420, 10.1016/S1360-1385(01)02042-8

Rubio, 2005, An alternative tandem affinity purification strategy applied to Arabidopsis protein complex isolation, Plant J., 41, 767, 10.1111/j.1365-313X.2004.02328.x

Ruegger, 1998, The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast Grr1p, Genes Dev., 12, 198, 10.1101/gad.12.2.198

Sessions, 1997, ETTIN patterns the Arabidopsis floral meristem and reproductive organs, Development, 124, 4481, 10.1242/dev.124.22.4481

Tatematsu, 2004, MASSUGU2 encodes Aux/IAA19, an auxin-regulated protein that functions together with the transcriptional activator NPH4/ARF7 to regulate differential growth responses of hypocotyl and formation of lateral roots in Arabidopsis thaliana, Plant Cell, 16, 379, 10.1105/tpc.018630

Tian, 2004, Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition, Plant J., 40, 333, 10.1111/j.1365-313X.2004.02220.x

Tiwari, 2001, AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxin, Plant Cell, 13, 2809, 10.1105/tpc.010289

Tiwari, 2004, Aux/IAA proteins contain a potent transcriptional repression domain, Plant Cell, 16, 533, 10.1105/tpc.017384

Ulmasov, 1997, Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements, Plant Cell, 9, 1963

Ulmasov, 1999, Activation and repression of transcription by auxin-response factors, Proc. Natl. Acad. Sci. USA, 96, 5844, 10.1073/pnas.96.10.5844

Ulmasov, 1999, Dimerization and DNA binding of auxin response factors, Plant J., 19, 309, 10.1046/j.1365-313X.1999.00538.x

Voinnet, 1998, Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA, Cell, 95, 177, 10.1016/S0092-8674(00)81749-3

Weijers, 2004, Funneling auxin action: specificity in signal transduction, Curr. Opin. Plant Biol., 7, 687, 10.1016/j.pbi.2004.09.006

Weijers, 2005, Auxin and embryo axis formation: the ends in sight?, Curr. Opin. Plant Biol., 8, 32, 10.1016/j.pbi.2004.11.001

Weijers, 2001, An Arabidopsis Minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene, Development, 128, 4289, 10.1242/dev.128.21.4289

Xie, 1998, COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility, Science, 280, 1091, 10.1126/science.280.5366.1091

Xu, 2002, The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis, Plant Cell, 14, 1919, 10.1105/tpc.003368

Yang, 2004, The IAA1 protein is encoded by AXR5 and is a substrate of SCFTIR1, Plant J., 40, 772, 10.1111/j.1365-313X.2004.02254.x

Zenser, 2001, Auxin modulates the degradation rate of Aux/IAA proteins, Proc. Natl. Acad. Sci. USA, 98, 11795, 10.1073/pnas.211312798