The Application of JPEG2000 in Virtual Microscopy

Weinstein RS: Innovations in medical imaging and virtual microscopy. Hum Pathol 36(4):317–319, 2005

Lundin M, Lundin J, Helin H, Isola J: A digital atlas of breast histopathology: an application of web based virtual microscopy. J Clin Pathol 57(12):1288–1291, 2004

Kumar RK, Freeman B, Velan GM, De Permentier PJ: Integrating histology and histopathology teaching in practical classes using virtual slides. Anat Rec B New Anat 289(4):128–133, 2006

Lundin M, Lundin J, Isola J: Virtual microscopy. J Clin Pathol 57(12):1250–1251, 2004

Helin H, Lundin M, Lundin J, Martikainen P, Tammela T, Helin H, van der Kwast T, Isola J: Web-based virtual microscopy in teaching and standardizing Gleason grading. Hum Pathol 36(4):381–386, 2005

Furness P: A randomized controlled trial of the diagnostic accuracy of internet-based telepathology compared with conventional microscopy. Histopathology 50(2):266–273, 2007

Rojo MG, García GB, Mateos CP, García JG, Vicente MC: Critical Comparison of 31 Commercially Available Digital Slide Systems in Pathology. Int J Surg Pathol 14(4):285–305, 2006

Burthem J, Brereton M, Ardern J, Hickman L, Seal L, Serrant A, Hutchinson CV, Wells E, McTaggart P, De la Salle B, Parker–Williams J, Hyde K: The use of digital ’virtual slides’ in the quality assessment of haematological morphology: results of a pilot exercise involving UK NEQAS(H) participants. Br J Haematol 130(2):293–296, 2005

Zoomify, Inc., USA: Zoomify image server software. Available at http://www.zoomify.com/ . Accessed 12 July 2007

The Joint Photographic Experts Group website. Available at http://www.jpeg.org/ . Accessed 12 July 2007

Information technology—JPEG 2000 image coding system: Core coding system. ISO/IEC 15444-1, 2000 | ITU-T Recommendation T.800, 2002

Taubman DS, Marcellin MW: JPEG2000: Image Compression Fundamentals, Standards and Practice: Springer, 2002

Skodras A, Christopoulos C, Ebrahimi T: The JPEG 2000 Still Image Compression Standard. IEEE Signal Proc Mag 18(5):36–58, 2001

Rabbani M, Joshi R: An overview of the JPEG 2000 still image compression standard. Signal Process: Image Comm 17(1):3–48, 2002

Information technology—JPEG 2000 image coding system: Extensions. ISO/IEC 15444-2, 2002 | ITU-T Recommendation T.801, 2002

Information technology—JPEG 2000 image coding system: Interactivity tools, APIs and protocols. ISO/IEC 15444-9, 2005 | ITU-T Recommendation T.808, 2005

Taubman DS, Prandolini R: Architecture, Philosophy and Performance of JPIP: Internet Protocol Standard for JPEG2000. Proc SPIE 5150:791–805, 2003

Tuominen VJ, Isola J, University of Tampere, Finland: LargeMontage—a Java application for creating large image montages. Available at http://iki.fi/vtuo/software/largemontage/ . Accessed 12 July 2007

Rasband WS, U.S. National Institutes of Health, USA: ImageJ image analysis software. Available at http://rsb.info.nih.gov/ij/ . Accessed 12 July 2007

Taubman DS, The University of New South Wales, Australia: Kakadu JPEG2000 Framework. Available at http://www.kakadusoftware.com/ . Accessed 12 July 2007

The Apache Software Foundation, USA: The Apache HTTP Server Project. Available at http://httpd.apache.org/ . Accessed 12 July 2007

Earth Resource Mapping Ltd., Australia: ER Mapper Image Compression SDK. Available at http://www.ermapper.com/ . Accessed 12 July 2007

Gao M, Bridgman P, Kumar S: Computer Aided Prostate Cancer Diagnosis Using Image Enhancement and JPEG2000. Proc SPIE 5203:323–334, 2003

Tuominen VJ, Isola J, University of Tampere, Finland: JVSschema: a metadata XML schema for the JVS software. Available at http://jvsmicroscope.uta.fi/jvsschema/ . Accessed 12 July 2007

Santa-Cruz D, Grosbois R, Ebrahimi T: JPEG 2000 performance evaluation and assessment. Signal Process: Image Comm 17(1):113–130, 2002

Ebrahimi F, Chamik M, Winkler S: JPEG vs. JPEG2000: An Objective Comparison of Image Encoding Quality. Proc SPIE 5558:300–308, 2004

Aware Systems, Belgium: The BigTIFF File Format Proposal. Available at http://www.awaresystems.be/imaging/tiff/bigtiff.html . Accessed 10 October 2007

Digital Imaging and Communications in Medicine (DICOM). Available at http://medical.nema.org/dicom/2007/ . Accessed 12 July 2007

Digital Imaging and Communications in Medicine (DICOM), Supplement 61: JPEG 2000 Transfer Syntaxes. Available at ftp://medical.nema.org/medical/dicom/final/sup61_ft.pdf. Accessed 12 July 2007

Digital Imaging and Communications in Medicine (DICOM), Supplement 106: JPEG 2000 Interactive Protocol. Available at ftp://medical.nema.org/medical/dicom/final/sup106_ft.pdf. Accessed 12 July 2007

Digital Imaging and Communications in Medicine (DICOM), Strategic Document & Principal Contacts. Available at http://medical.nema.org/dicom/geninfo/Strategy.pdf . Accessed 10 October 2007