Identification of morphologically similar species of Tribulus (Zygophyllaceae) by employing DNA barcodes and rRNA secondary structures

Ecological Genetics and Genomics - Tập 18 - Trang 100072 - 2021
Dhivya Selvaraj1, Sathishkumar Ramalingam1
1Plant Genetic Engineering Laboratory, Department of Biotechnology, Bharathiar University, Coimbatore 641046, India

Tài liệu tham khảo

Kamboj, 2000, Herbal medicine, Curr. Sci., 78, 35 Mittra, 2007, A note on unintentional adulterations in ayurvedicherbs, Ethnobot. Leaflet., 11, 11 Xie, 2009, Identification of crude drugs from Chinese medicinal plants of the genus Bupleurum using ribosomal DNA ITS sequences, Planta Med., 75, 89, 10.1055/s-0028-1088334 Lee, 2010, An assessment of the utility of universal and Specific genetic markers for opium poppy identification, J. Forensic Sci., 55, 1202, 10.1111/j.1556-4029.2010.01423.x World Health Organization library cataloguing, 2010 Poornima, 2010, Adulteration and substitution in herbal drugs a critical analysis, Int. J. Res. Ayurveda Pharm., 1 O Rogers, 1985, Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues, Plant Mol. Biol., 5, 69, 10.1007/BF00020088 Thompson, 1994, Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673 Hall, 1999, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucleic Acids Symp. Ser., 41, 95 Tamura, 2007, MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0, Mol. Biol. Evol., 24, 1596, 10.1093/molbev/msm092 Mathews, 1999, Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure, J. Mol. Biol., 288, 911, 10.1006/jmbi.1999.2700 Zuker, 2003, Mfold web server for nucleic acid folding and hybridization prediction, Nucleic Acids Res., 31, 3406, 10.1093/nar/gkg595 Harpke, 2008, 5.8S motifs for the identification of pseudogenic ITS regions, Botany, 86, 300, 10.1139/B07-134 P Balasubramani, 2010, Development of ITS sequence based molecular marker to distinguish, Tribulusterrestris L. (Zygophyllaceae) from its adulterants, Fitoterapia, 81, 503, 10.1016/j.fitote.2010.01.002 R Manhart, 1992, Molecular data and species concepts in the algae, J. Phycol., 28, 730, 10.1111/j.0022-3646.1992.00730.x Chen, 2010, Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species, PloS One, 5 Gao, 2010, Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS2, J. Ethnopharmacol., 130, 10.1016/j.jep.2010.04.026 Qiao CF, Han QB, Zhao ZL. et al Sequence analysis based on ITS1 region of nuclear ribosomal DNA of amomum villosum and ten species of alpinia. J. Food Drug Anal. 17:142-145. Jianping, 2012, The short ITS2 sequence serves as an efficient taxonomic sequence tag in comparison with the Full-Length ITS, BioMed Res. Int. Hr ibova, 2011, The ITS1-5.8S-ITS2 sequence region in the musaceae: structure, diversity and use in molecular phylogeny, PloS One, 6 Varghese, 2006, Taxonomic status of some of the Tribulus species in the Indian subcontinent, Saudi J. of Biol., 13, 7