Genotype versus Phenotype Variability in Chlorella and Micractinium (Chlorophyta, Trebouxiophyceae)

Protist - Tập 157 - Trang 315-333 - 2006
Wei Luo1, Stephan Pflugmacher2, Thomas Pröschold3, Norbert Walz2, Lothar Krienitz1
1Leibniz Institute of Freshwater Ecology and Inland Fisheries, Department of Limnology of Stratified Lakes, Alte Fischerhütte 2, 16775 Stechlin-Neuglobsow, Germany
2Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, 12587 Berlin, Germany
3Culture Collection of Algae and Protozoa, Scottish Association for Marine Science, Dunstaffnage Marine Laboratory, Dunbeg by Oban, Argyll PA37 1QA, UK

Tài liệu tham khảo

Akaike, 1974, A new look at the statistical model identification, IEEE Trans Contr, 19, 716, 10.1109/TAC.1974.1100705 Andreeva, 1975 Beijerinck, 1890, Culturversuche mit Zoochlorellen, Lichenengoniden und anderen niederen Algen I–III, Bot Zeit, 48, 726 Brunnthaler, 1915, Protococcales, 52 Coleman, 2000, The significance of a coincidence between evolutionary landmarks found in mating affinity and a DNA sequence, Protist, 151, 1, 10.1078/1434-4610-00002 Coleman, 2002, Microbial eukaryote species, Science, 297, 337, 10.1126/science.297.5580.337a Coleman, 2003, ITS2 is a double-edged tool for eukaryote evolutionary comparisons, Trends Genet, 19, 370, 10.1016/S0168-9525(03)00118-5 Ellis, 1968, Control of sexuality in Golenkinia, Am J Bot, 55, 600, 10.1002/j.1537-2197.1968.tb07417.x Felsenstein, 1985, Confidence limits on phylogenies: an approach using the bootstrap, Evolution, 39, 783, 10.1111/j.1558-5646.1985.tb00420.x Fenchel, 2003, Is microbial diversity fundamentally different from biodiversity of larger animals and plants?, Europ J Protistol, 39, 486, 10.1078/0932-4739-00025 Finlay, 2002, Global dispersal of free-living microbial eukaryote species, Science, 296, 1061, 10.1126/science.1070710 Finlay, 2002, Microbial eukaryote species, Science, 297, 337, 10.1126/science.297.5580.337a Finlay, 2004, Cosmopolitan metapopulations of free-living microbial eukaryotes, Protist, 155, 237, 10.1078/143446104774199619 Fott, 1969, A Monograph of the Genus Chlorella. The fresh water species, 10 Fresenius, 1858, Beiträge zur Kenntnis mikroskopischer Organismen, Abh Senckenberg Naturf Ges, 2, 211 Hegewald, 1984, Zur Struktur und Taxonomie bestachelter Chlorellales, Nova Hedwigia, 39, 297 Hegewald, 1987, Ergänzungen und Korrekturen zur Struktur und Taxonomie bestachelter Chlorellales, Nova Hedwigia, 44, 537 Hegewald, 1994, Studies on Scenedesmus costato-granulatus Skuja, Nova Hedwigia, 59, 97 Hessen, 1993, Morphological changes in Scenedesmus induced by substances released from Daphnia, Arch Hydrobiol, 127, 129, 10.1127/archiv-hydrobiol/127/1993/129 Hindák, 1980, Studies on the Chlorococcal algae II, Biol Práce, 26, 1 Huelsenbeck, 2001, MrBayes: Bayesian inference of phylogenetic trees, Bioinformatics, 17, 754, 10.1093/bioinformatics/17.8.754 Huss, 1999, Biochemical taxonomy and molecular phylogeny of the genus Chlorella sensu lato (Chlorophyta), J Phycol, 35, 587, 10.1046/j.1529-8817.1999.3530587.x Ikeda, 1995, Species-specific differences of pyrenoids in Chlorella (Chlorophyta), J Phycol, 31, 313, 10.1111/j.0022-3646.1995.00813.x Iyengar, 1956, On sexual reproduction in a new species of Golenkinia, J Indian Bot Soc, 35, 371 Jahn R, Kusber WH, (eds) (2006) AlgaTerra Information System [online]. Botanic Garden and Botanical Museum Berlin-Dahlem, FU-Berlin. Available at 〈http://www.algaterra.org〉 Komárek J, Fott B (1983) Chlorophyceae (Grünalgen), Ordnung Chlorococcales. In Huber-Pestalozzi G (ed) Das Phytoplankton des Süßwassers, 7. Teil, 1. Hälfte. Schweizerbart'sche Verlagsbuchhandlung, Stuttgart Korshikov, 1937, On the sexual reproduction (oogamy) in the Micractinieae, Proc Kharkov A Gorky State Univ, 10, 109 Krienitz, 2004, Phylogenetic relationship of Chlorella and Parachlorella gen. nov. (Chlorophyta, Trebouxiophyceae), Phycologia, 43, 529, 10.2216/i0031-8884-43-5-529.1 Lampert, 1994, Chemical induction of colony formation in a green alga (Scenedesmus acutus) by grazers (Daphnia), Limnol Oceanogr, 39, 1543, 10.4319/lo.1994.39.7.1543 Lass, 2003, Chemically induced anti-predator defences in plankton: a review, Hydrobiologia, 491, 221, 10.1023/A:1024487804497 Lund, 1954, Three new British Algal records and spore formation in Micractinium pusillum Fres, The Naturalist, 1954, 81 Luo, 2005, Genus and species concept in Chlorella and Micractinium (Chlorophyta, Chlorellaceae): genotype versus phenotypical variability under ecosystem conditions, Verh Int Ver Limnol, 29, 170 Lürling, 1998, Effect of grazing-associated infochemicals on growth and morphological development in Scenedesmus acutus (Chlorophyceae), J Phycol, 34, 578, 10.1046/j.1529-8817.1998.340578.x Lürling, 1999, Grazer induced defenses in Scenedesmus (Chlorococcales; Chlorophyceae): coenobium and spine formation, Phycologia, 38, 368, 10.2216/i0031-8884-38-5-368.1 Lutz, 2005, Environmental signals: synthetic humic substances act as xeno-estrogen and affect the thyroid system of X. laevis, Chemosphere, 61, 1183, 10.1016/j.chemosphere.2005.02.073 Lynch, 1991, Adaptive and demographic responses of plankton populations to environmental change, Limnol Oceanogr, 36, 1301, 10.4319/lo.1991.36.7.1301 Mai, 1997, The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants, J Mol Evol, 44, 258, 10.1007/PL00006143 Marin, 2003, Phylogeny and taxonomic revision of plastid-containing euglenophytes based on SSU rDNA sequence comparison and synapomorphic signatures in the SSU rRNA secondary structure, Protist, 154, 99, 10.1078/143446103764928521 Mathews, 1999, Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure, J Mol Biol, 288, 911, 10.1006/jmbi.1999.2700 Mayr, 1948, The bearing of the new systematics on genetical problemsL: the nature of species, Adv Genet, 2, 205, 10.1016/S0065-2660(08)60469-1 Moestrup, 1972, Observations on the fine structure of spermatozoids and vegetative cells of the green alga Golenkinia, Brit Phycol J, 7, 169, 10.1080/00071617200650191 Müller, 2005, Distinction between multiple isolates of Chlorella vulgaris (Chlorophyta, Trebouxiophyceae) and testing for conspecificity using amplified fragment length polymorphism and ITS rDNA sequences, J Phycol, 41, 1236, 10.1111/j.1529-8817.2005.00134.x Nemcová, 2000, Cell wall development, microfibril and pyrenoid structure in type strains of Chlorella vulgaris, C. kessleri, C. sorokiniana compared with C. luteoviridis (Trebouxiophyceae, Chlorophyta), Algol Stud, 100, 95 Norton, 1996, Algal biodiversity, Phycologia, 35, 308, 10.2216/i0031-8884-35-4-308.1 Nozaki, 1995, Taxonomic re-examination of two strains labeled “Chlorella” in the microbial culture collection at the National Institute for Environmental Studies (NIES-Collection), Microbiol Cult Coll, 11, 11 Porter, 1973, Selective grazing and differential digestion of algae by zooplankton, Nature, 244, 179, 10.1038/244179a0 Posada, 1998, Modeltest: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817 Rothhaupt, 1990, Differences in particle-size dependent feeding efficiencies of closely related rotifer species, Limnol Oceanogr, 35, 16, 10.4319/lo.1990.35.1.0016 Rothhaupt, 1990, Changes of the functional responses of the rotifers Brachionus rubens and Brachionus calyciflorus with particle sizes, Limnol Oceanogr, 35, 24, 10.4319/lo.1990.35.1.0024 Schlüter, 1987, Impact on rotifer grazing on population dynamics of green microalgae in high-rate ponds, Water Res, 21, 1293, 10.1016/0043-1354(87)90183-7 Schnepf, 1980, Bristles and spikes in Chlorococcales: Ultrastructural studies in Acanthosphaera, Micractinium, Pediastrum, Polyedriopsis, Scenedesmus, and Siderocystopsis, J Ultrastruct Res, 72, 367, 10.1016/S0022-5320(80)90071-4 Smith, 1950 Sommer, 1986, The PEG-model of seasonal succession of planktonic events in fresh waters, Arch Hydrobiol, 106, 433, 10.1127/archiv-hydrobiol/106/1986/433 Starr RC (1963) Homothallism in Golenkinia minutissima. In: Japanese Society of Plant Physiologists (ed) Studies on Microalgae and Photosynthetic Bacteria. University of Tokyo Press, Tokyo, pp 3–6 Swofford, 2002 Tamura, 1993, Estimation of the number of nucleotide substitutions in the control region of mitochondrial-DNA in humans and chimpanzees, Mol Biol Evol, 10, 512 Utermöhl, 1958, Zur Vervollkommnung der quantitativen Phytoplankton-Methodik, Mitt Int Ver Limnol, 9, 1 Van Donk, 2005, Planktonic interactions: developments and perspectives, Verh Int Ver Limnol, 29, 61 Verschoor, 2004, Inducible colony formation within the Scenedesmaceae: adaptative response to infochemicals from two different herbivore taxa, J Phycol, 40, 808, 10.1111/j.1529-8817.2004.04007.x von Elert, 1999, Colony formation in Scenedesmus: grazer-mediated release and chemical features of the infochemical, J Plankton Res, 21, 789, 10.1093/plankt/21.4.789 Walz, 1997, Algae and rotifer turbidostats: studies on stability of live feed cultures, Hydrobiologia, 358, 127, 10.1023/A:1003168020023 Wiltshire, 1999, Urea excretion by Daphnia: a colony-inducing factor in Scenedesmus?, Limnol Oceanogr, 44, 1894, 10.4319/lo.1999.44.8.1894 Wolf, 2002, Phylogenetic position of Actinastrum hantzschii Lagerheim 1882 (Chlorophyta, Trebouxiophyceae), Algol Stud, 104, 59 Wolf, 2003, Phylogenetic position of the Golenkiniaceae (Chlorophyta) as inferred from 18S rDNA sequence data, Biologia, 58, 433 Wood, 1992, The species concept in phytoplankton ecology, J Phycol, 28, 723, 10.1111/j.0022-3646.1992.00723.x Wuyts, 2000, Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA, Nucleic Acids Res, 28, 4698, 10.1093/nar/28.23.4698 Yamamoto, 2005, Late type of daughter cell wall synthesis in one of the Chlorellaceae, Parachlorella kessleri (Chlorophyta, Trebouxiophyceae), Planta, 221, 766, 10.1007/s00425-005-1486-8 Zuker, 2003, Mfold web server for nucleic acid folding and hybridization prediction, Nucleic Acids Res, 31, 3406, 10.1093/nar/gkg595