Structure of the Actin Crosslinking Core of Fimbrin

Adam, 1995, Cytoskeletal rearrangements and the functional role of T-plastin during entry of Shigella flexneri into HeLa cells, J. Cell Biol., 129, 367, 10.1083/jcb.129.2.367 Adams, 1989, Dominant suppressors of yeast actin mutations that are reciprocally suppressed, Genetics, 121, 675, 10.1093/genetics/121.4.675 Adams, 1989, A yeast actin-binding protein is encoded by SAC6, a gene found by suppression of an actin mutation, Science, 243, 231, 10.1126/science.2643162 Banuelos, 1998, Structural comparisons of calponin homology domains, Structure, 6, 1419, 10.1016/S0969-2126(98)00141-5 Barton, 1990, Protein multiple sequence alignment and flexible pattern matching, Methods Enzymol., 183, 403, 10.1016/0076-6879(90)83027-7 Botstein, 1982, Genetic approaches to the analysis of microbial development, Annu. Rev. Genet., 16, 61, 10.1146/annurev.ge.16.120182.000425 Bresnick, 1991, Evidence that a 27-residue sequence is the actin-binding site of ABP-120, J. Biol. Chem., 266, 12989, 10.1016/S0021-9258(18)98793-4 Brower, 1995, Genetic analysis of the fimbrin-actin binding interaction in Saccharomyces cerevisiae, Genetics, 140, 91, 10.1093/genetics/140.1.91 Brunger, 1998, Crystallography & NMR system, Acta Crystallogr. D Biol. Crystallogr., 54, 905, 10.1107/S0907444998003254 Carugo, 1997, Crystal structure of a calponin homology domain, Nat. Struct. Biol., 4, 175, 10.1038/nsb0397-175 CCP4, 1994, Collaborative Computational Project 4) The CCP4 suite, Acta Crystallogr. D, 50, 760 Corrado, 1994, Deletion analysis of the dystrophin-actin binding domain, FEBS Lett., 344, 255, 10.1016/0014-5793(94)00397-1 Cowtan, 1998, Miscellaneous algorithms for density modification, Acta Crystallogr. D Biol. Crystallogr., 54, 487, 10.1107/S0907444997011980 de Arruda, 1990, Fimbrin is a homologue of the cytoplasmic phosphoprotein plastin and has domains homologous with calmodulin and actin gelation proteins, J. Cell Biol., 111, 1069, 10.1083/jcb.111.3.1069 DeLano, 2002 Galan, 2000, Striking a balance, Proc. Natl. Acad. Sci. USA, 97, 8754, 10.1073/pnas.97.16.8754 Galkin, 2002, The utrophin actin-binding domain binds F-actin in two different modes, J. Cell Biol., 157, 243, 10.1083/jcb.200111097 Galkin, 2003, Do the utrophin tandem calponin homology domains bind F-actin in a compact or extended conformation?, J. Mol. Biol., 331, 967, 10.1016/S0022-2836(03)00842-8 Garcia-Alvarez, 2003, Structural and functional analysis of the actin binding domain of plectin suggests alternative mechanisms for binding to F-actin and integrin beta4, Structure (Camb.), 11, 615, 10.1016/S0969-2126(03)00090-X Garcia De La Torre, 2000, Calculation of hydrodynamic properties of globular proteins from their atomic-level structure, Biophys. J., 78, 719, 10.1016/S0006-3495(00)76630-6 Glenney, 1981, F-actin binding and bundling properties of fimbrin, a major cytoskeletal protein of microvillus core filaments, J. Biol. Chem., 256, 9283, 10.1016/S0021-9258(19)52543-1 Goldsmith, 1997, The structure of an actin-crosslinking domain from human fimbrin, Nat. Struct. Biol., 4, 708, 10.1038/nsb0997-708 Hanein, 1997, Evidence for a conformational change in actin induced by fimbrin (N375) binding, J. Cell Biol., 139, 387, 10.1083/jcb.139.2.387 Hanein, 1998, An atomic model of fimbrin binding to F-actin and its implications for filament crosslinking and regulation, Nat. Struct. Biol., 5, 787, 10.1038/1828 Henikoff, 1992, Amino acid substitution matrices from protein blocks, Proc. Natl. Acad. Sci. USA, 89, 10915, 10.1073/pnas.89.22.10915 Higgins, 1992, Clustal v, Comput. Appl. Biosci., 8, 189 Hofer, 1997, Sorting of actin isoforms in chicken auditory hair cells, J. Cell Sci., 110, 765, 10.1242/jcs.110.6.765 Honts, 1994, Actin mutations that show suppression with fimbrin mutations identify a likely fimbrin-binding site on actin, J. Cell Biol., 126, 413, 10.1083/jcb.126.2.413 Jones, 1991, Improved methods for building protein models in electron density maps and the location of errors in these models, Acta Crystallogr. A, 47, 110, 10.1107/S0108767390010224 Keep, 1999, Crystal structure of the actin-binding region of utrophin reveals a head-to-tail dimer, Struct. Fold. Des., 7, 1539, 10.1016/S0969-2126(00)88344-6 Kovar, 2000, AtFim1 is an actin filament crosslinking protein from Arabidopsis thaliana, Plant J., 24, 625, 10.1046/j.1365-313x.2000.00907.x Kraulis, 1991, Molscript, J. Appl. Crystallogr., 24, 946, 10.1107/S0021889891004399 Laskowski, 1993, Procheck, J. Appl. Crystollogr., 26, 283, 10.1107/S0021889892009944 Levine, 1990, The interaction of actin with dystrophin, FEBS Lett., 263, 159, 10.1016/0014-5793(90)80728-2 Levine, 1992, Binding sites involved in the interaction of actin with the N-terminal region of dystrophin, FEBS Lett., 298, 44, 10.1016/0014-5793(92)80019-D Liu, 2004, A 3-D reconstruction of smooth muscle alpha-actinin by CryoEm reveals two different conformations at the actin-binding region, J. Mol. Biol., 338, 115, 10.1016/j.jmb.2004.02.034 Lu, 1999, Findncs, J. Appl. Crystallogr., 32, 365, 10.1107/S0021889898015052 Matsudaira, 1991, Modular organization of actin crosslinking proteins, Trends Biochem. Sci., 16, 87, 10.1016/0968-0004(91)90039-X Matsudaira, 1994, Actin crosslinking proteins at the leading edge, Semin. Cell Biol., 5, 165, 10.1006/scel.1994.1021 Matsudaira, 1983, Role of fimbrin and villin in determining the interfilament distances of actin bundles, Nature, 301, 209, 10.1038/301209a0 Merrit, 1997, Raster 3D photorealistic molecular graphics, Methods Enzymol., 277, 505, 10.1016/S0076-6879(97)77028-9 Minor, 2000, Strategies for macromolecular synchrotron crystallography, Struct. Fold. Des., 8, R105, 10.1016/S0969-2126(00)00139-8 Mooseker, 1983, Actin binding proteins of the brush border, Cell, 35, 11, 10.1016/0092-8674(83)90202-7 Morris, 2003, ARP/wARP and automatic interpretation of protein electron density maps, Methods Enzymol., 374, 229, 10.1016/S0076-6879(03)74011-7 Murshudov, 1997, Refinement of macromolecular structures by the maximum-likelihood method, Acta Crystallogr. D Biol. Crystallogr., 53, 240, 10.1107/S0907444996012255 Nakano, 2001, Interactions among a fimbrin, a capping protein, and an actin-depolymerizing factor in organization of the fission yeast actin cytoskeleton, Mol. Biol. Cell, 12, 3515, 10.1091/mbc.12.11.3515 Namba, 1992, Human T cell L-plastin bundles actin filaments in a calcium-dependent manner, J. Biochem. (Tokyo), 112, 503, 10.1093/oxfordjournals.jbchem.a123929 Nicholls, 1991, Protein folding and association, Proteins, 11, 281, 10.1002/prot.340110407 Norwood, 2000, The structure of the N-terminal actin-binding domain of human dystrophin and how mutations in this domain may cause Duchenne or Becker muscular dystrophy, Struct. Fold. Des., 8, 481, 10.1016/S0969-2126(00)00132-5 Prevost, 1992, Unipolar reorganization of F-actin layer at bacterial division and bundling of actin filaments by plastin correlate with movement of Shigella flexneri within HeLa cells, Infect. Immun., 60, 4088, 10.1128/IAI.60.10.4088-4099.1992 Sandrock, 1997, Allele-specific suppression by formation of new protein-protein interactions in yeast, Genetics, 147, 1635, 10.1093/genetics/147.4.1635 Sheldrick, 1995, Structure solution by iterative peaklist optimization and tangent expansion in space group P1, Acta Crystallogr. B, 51, 423, 10.1107/S0108768195003661 Spudich, 1971, The regulation of rabbit skeletal muscle contraction, J. Biol. Chem., 246, 4866, 10.1016/S0021-9258(18)62016-2 Sutherland-Smith, 2003, An atomic model for actin binding by the CH domains and spectrin-repeat modules of utrophin and dystrophin, J. Mol. Biol., 329, 15, 10.1016/S0022-2836(03)00422-4 Terwilliger, 1997, Multiwavelength anomalous diffraction phasing of macromolecular structures, Methods Enzymol., 276, 530, 10.1016/S0076-6879(97)76076-2 Volkmann, 2001, An atomic model of actin filaments cross-linked by fimbrin and its implications for bundle assembly and function, J. Cell Biol., 153, 947, 10.1083/jcb.153.5.947 Wu, 2001, Roles of a fimbrin and an alpha-actinin-like protein in fission yeast cell polarization and cytokinesis, Mol. Biol. Cell, 12, 1061, 10.1091/mbc.12.4.1061 Xu, 1998, Dynamic cross-linking by alpha-actinin determines the mechanical properties of actin filament networks, J. Biol. Chem., 273, 9570, 10.1074/jbc.273.16.9570 Xu, 2000, Strain hardening of actin filament networks. Regulation by the dynamic cross-linking protein alpha-actinin, J. Biol. Chem., 275, 35886, 10.1074/jbc.M002377200